RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 UNQ9165/PRO28630Q6UXU0 137 aa11.67□□□□□ -0.54
ACTB-204ENST00000425660 SMIM12Q96EX1 92 aa11.67□□□□□ -0.54
ACTB-204ENST00000425660 SMR3AQ99954 134 aa11.67□□□□□ -0.54
ACTB-204ENST00000425660 ESM1Q9NQ30 184 aa11.67□□□□□ -0.54
ACTB-204ENST00000425660 PEF1Q9UBV8 284 aaKnown RBP11.67□□□□□ -0.54
ACTB-204ENST00000425660 H7BYZ3 331 aa11.66□□□□□ -0.54
ACTB-204ENST00000425660 ISLRO14498 428 aa11.66□□□□□ -0.54
ACTB-204ENST00000425660 PPP1R2P9O14990 202 aa11.66□□□□□ -0.54
ACTB-204ENST00000425660 ARL6IP6Q8N6S5 226 aa11.66□□□□□ -0.54
ACTB-204ENST00000425660 FAM181BA6NEQ2 426 aa11.65□□□□□ -0.54
ACTB-204ENST00000425660 GCGP01275 180 aa11.65□□□□□ -0.54
ACTB-204ENST00000425660 APOHP02749 345 aaPredicted RBP11.65□□□□□ -0.54
ACTB-204ENST00000425660 RPLP1P05386 114 aaKnown RBP11.65□□□□□ -0.54
ACTB-204ENST00000425660 FOLR2P14207 255 aa11.65□□□□□ -0.54
ACTB-204ENST00000425660 PSG9Q00887 426 aa11.65□□□□□ -0.54
ACTB-204ENST00000425660 CMTM2Q8TAZ6 248 aa11.65□□□□□ -0.54
ACTB-204ENST00000425660 FMC1Q96HJ9 113 aa11.65□□□□□ -0.54
ACTB-204ENST00000425660 UBE2E2Q96LR5 201 aa11.65□□□□□ -0.54
ACTB-204ENST00000425660 URGCP-MRPS24S4R325 110 aa11.65□□□□□ -0.55
ACTB-204ENST00000425660 TRBV24-1A0A075B6N3 115 aa11.64□□□□□ -0.55
ACTB-204ENST00000425660 TRAV34A0A0B4J273 112 aa11.64□□□□□ -0.55
ACTB-204ENST00000425660 PFN1P07737 140 aaKnown RBP11.64□□□□□ -0.55
ACTB-204ENST00000425660 ATF4P18848 351 aaPredicted RBP11.64□□□□□ -0.55
ACTB-204ENST00000425660 RAB5AP20339 215 aa11.64□□□□□ -0.55
ACTB-204ENST00000425660 GALR1P47211 349 aa11.64□□□□□ -0.55
ACTB-204ENST00000425660 UBE2G1P62253 170 aa11.64□□□□□ -0.55
ACTB-204ENST00000425660 GPHB5Q86YW7 130 aa11.64□□□□□ -0.55
ACTB-204ENST00000425660 IMMP2LQ96T52 175 aa11.64□□□□□ -0.55
ACTB-204ENST00000425660 AAMDCQ9H7C9 122 aa11.64□□□□□ -0.55
ACTB-204ENST00000425660 ZNF331Q9NQX6 463 aaPredicted RBP11.64□□□□□ -0.55
ACTB-204ENST00000425660 HIVEP1P15822 2718 aa11.64□□□□□ -0.55
ACTB-204ENST00000425660 TRBV6-1A0A0K0K1D8 114 aa11.63□□□□□ -0.55
ACTB-204ENST00000425660 LTAP01374 205 aa11.63□□□□□ -0.55
ACTB-204ENST00000425660 IGLV2-11P01706 119 aa11.63□□□□□ -0.55
ACTB-204ENST00000425660 MEOX2P50222 304 aa11.63□□□□□ -0.55
ACTB-204ENST00000425660 C16orf54Q6UWD8 224 aa11.63□□□□□ -0.55
ACTB-204ENST00000425660 Q6ZSV7 163 aa11.63□□□□□ -0.55
ACTB-204ENST00000425660 BAGE2Q86Y30 109 aa11.63□□□□□ -0.55
ACTB-204ENST00000425660 MLST8Q9BVC4 326 aa11.63□□□□□ -0.55
ACTB-204ENST00000425660 ZNF207O43670 478 aaKnown RBP11.63□□□□□ -0.55
ACTB-204ENST00000425660 CRYBA1P05813 215 aa11.63□□□□□ -0.55
ACTB-204ENST00000425660 RNASE1P07998 156 aaKnown RBP11.63□□□□□ -0.55
ACTB-204ENST00000425660 LGALS1P09382 135 aaKnown RBP11.63□□□□□ -0.55
ACTB-204ENST00000425660 OR10G8Q8NGN5 311 aa11.63□□□□□ -0.55
ACTB-204ENST00000425660 GLMPQ8WWB7 406 aa11.63□□□□□ -0.55
ACTB-204ENST00000425660 OR5B12Q96R08 314 aa11.63□□□□□ -0.55
ACTB-204ENST00000425660 PYGO2Q9BRQ0 406 aa11.63□□□□□ -0.55
ACTB-204ENST00000425660 DAZ1Q9NQZ3 744 aaKnown RBP11.63□□□□□ -0.55
ACTB-204ENST00000425660 IGHV3-66A0A0C4DH42 116 aa11.62□□□□□ -0.55
ACTB-204ENST00000425660 SERTM2A0A1B0GWG4 89 aa11.62□□□□□ -0.55
ACTB-204ENST00000425660 DIRC3C9JPN6 131 aa11.62□□□□□ -0.55
ACTB-204ENST00000425660 K7EMT4 169 aa11.62□□□□□ -0.55
ACTB-204ENST00000425660 M0R3E3 92 aa11.62□□□□□ -0.55
ACTB-204ENST00000425660 CXCL1P09341 107 aa11.62□□□□□ -0.55
ACTB-204ENST00000425660 SRD5A1P18405 259 aa11.62□□□□□ -0.55
ACTB-204ENST00000425660 OR5I1Q13606 314 aa11.62□□□□□ -0.55
ACTB-204ENST00000425660 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.62□□□□□ -0.55
ACTB-204ENST00000425660 KLHDC1Q8N7A1 406 aa11.62□□□□□ -0.55
ACTB-204ENST00000425660 TMEM75Q8N9X5 138 aa11.62□□□□□ -0.55
ACTB-204ENST00000425660 RPH3ALQ9UNE2 315 aa11.62□□□□□ -0.55
ACTB-204ENST00000425660 TGIF2-C20orf24A0A0A6YYL0 155 aa11.61□□□□□ -0.55
ACTB-204ENST00000425660 LY6G6DO95868 133 aa11.61□□□□□ -0.55
ACTB-204ENST00000425660 FOXL1Q12952 345 aa11.61□□□□□ -0.55
ACTB-204ENST00000425660 FAM106AQ4KMX7 169 aa11.61□□□□□ -0.55
ACTB-204ENST00000425660 GOLT1AQ6ZVE7 132 aa11.61□□□□□ -0.55
ACTB-204ENST00000425660 SLC50A1Q9BRV3 221 aa11.61□□□□□ -0.55
ACTB-204ENST00000425660 OSTCQ9NRP0 149 aa11.61□□□□□ -0.55
ACTB-204ENST00000425660 MTORP42345 2549 aa11.61□□□□□ -0.55
ACTB-204ENST00000425660 IGHV3OR16-13A0A075B7E8 117 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 IGHV3-74A0A0B4J1X5 117 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 A0A1W2PS18 150 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 ZNF785A8K8V0 405 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 K7EQM0 130 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 S100PP25815 95 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 HILS1P60008 231 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 FAM231DQ6ZW35 169 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 Q86TA4 180 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 WIPF2Q8TF74 440 aaPredicted RBP11.6□□□□□ -0.55
ACTB-204ENST00000425660 V9GYV3 84 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 NF1P21359 2839 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 IGHV3-49A0A0A0MS15 119 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 TRAV8-1A0A0A6YYK1 113 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 ZNF320A2RRD8 509 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 PSG3Q16557 428 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 Q71RC1 249 aaPredicted RBP11.6□□□□□ -0.55
ACTB-204ENST00000425660 NHLRC2Q8NBF2 726 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 ZNF418Q8TF45 676 aaPredicted RBP11.6□□□□□ -0.55
ACTB-204ENST00000425660 SGK494Q96LW2 274 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 HIVEP2P31629 2446 aa11.6□□□□□ -0.55
ACTB-204ENST00000425660 IGHV7-4-1A0A0J9YVY3 117 aa11.59□□□□□ -0.55
ACTB-204ENST00000425660 MGST1P10620 155 aaKnown RBP11.59□□□□□ -0.55
ACTB-204ENST00000425660 CSN1S1P47710 185 aa11.59□□□□□ -0.55
ACTB-204ENST00000425660 CDX1P47902 265 aaPredicted RBP11.59□□□□□ -0.55
ACTB-204ENST00000425660 IBA57Q5T440 356 aaKnown RBP11.59□□□□□ -0.55
ACTB-204ENST00000425660 KCNIP4Q6PIL6 250 aa11.59□□□□□ -0.55
ACTB-204ENST00000425660 C1QL4Q86Z23 238 aa11.59□□□□□ -0.55
ACTB-204ENST00000425660 TMEM183AQ8IXX5 376 aa11.59□□□□□ -0.55
ACTB-204ENST00000425660 GRAMD2BQ96HH9 432 aa11.59□□□□□ -0.55
ACTB-204ENST00000425660 FAM210BQ96KR6 192 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms