RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TMEM56-RWDD3S4R434 201 aa4.1□□□□□ -1.75
SDCBP-203ENST00000424270 A0A0J9YXV3 536 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 SNRPGP15A8MWD9 76 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 GABARAPH6UMI1 98 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 GPR31O00270 319 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 WBP4O75554 376 aaKnown RBP4.09□□□□□ -1.75
SDCBP-203ENST00000424270 GABARAPO95166 117 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 TAS2R20P59543 309 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 GFI1BQ5VTD9 330 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 FAM122CQ6P4D5 195 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 AHSA2Q719I0 299 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 ZNF485Q8NCK3 441 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 OR1B1Q8NGR6 318 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 RMI2Q96E14 147 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 SEC22AQ96IW7 307 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 VGLL1Q99990 258 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 ZNF2Q9BSG1 426 aaPredicted RBP4.09□□□□□ -1.75
SDCBP-203ENST00000424270 PARD6GQ9BYG4 376 aaPredicted RBP4.09□□□□□ -1.75
SDCBP-203ENST00000424270 SLC25A32Q9H2D1 315 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 MRPL16Q9NX20 251 aaKnown RBP4.09□□□□□ -1.75
SDCBP-203ENST00000424270 COX11Q9Y6N1 276 aa4.09□□□□□ -1.75
SDCBP-203ENST00000424270 IGKV2D-24A0A075B6R9 120 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 IGKV1OR2-108A0A075B7D4 117 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 CEBPZOSA8MTT3 80 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 SSX5O60225 188 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 SCGNO76038 276 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 ATG12O94817 140 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 LPAP08519 4548 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 S100A7P31151 101 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 HRH1P35367 487 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 RPP30P78346 268 aaKnown RBP4.08□□□□□ -1.76
SDCBP-203ENST00000424270 KLF9Q13886 244 aaPredicted RBP4.08□□□□□ -1.76
SDCBP-203ENST00000424270 LAGE3Q14657 143 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 ZNF846Q147U1 533 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 PRR4Q16378 134 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 TBC1D26Q86UD7 250 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 ARRDC1Q8N5I2 433 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 RNASEH2CQ8TDP1 164 aaKnown RBP4.08□□□□□ -1.76
SDCBP-203ENST00000424270 C7orf33Q8WU49 177 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 RRNAD1Q96FB5 475 aaKnown RBP4.08□□□□□ -1.76
SDCBP-203ENST00000424270 ZC2HC1AQ96GY0 325 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 PYGO2Q9BRQ0 406 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 MND1Q9BWT6 205 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 MRPL32Q9BYC8 188 aaKnown RBP4.08□□□□□ -1.76
SDCBP-203ENST00000424270 IFT46Q9NQC8 304 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 DIABLOQ9NR28 239 aa4.08□□□□□ -1.76
SDCBP-203ENST00000424270 TRAV8-1A0A0A6YYK1 113 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 MEIS3P1A6NDR6 274 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 IFITM5A6NNB3 132 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 GGTLC3B5MD39 225 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 INS-IGF2F8WCM5 200 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 PANO1I0J062 215 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 MYL9P24844 172 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 LEPP41159 167 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 ZNF90Q03938 601 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 FHL2Q14192 279 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 C14orf177Q52M58 125 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 ZFP1Q6P2D0 407 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 SH2D6Q7Z4S9 175 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 NOXA1Q86UR1 476 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 HOGA1Q86XE5 327 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 NANOGP1Q8N7R0 232 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 OR5AP2Q8NGF4 316 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 CYGBQ8WWM9 190 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 IL22RA2Q969J5 263 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 RPUSD4Q96CM3 377 aaKnown RBP4.07□□□□□ -1.76
SDCBP-203ENST00000424270 SLC35E1Q96K37 410 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 GPR82Q96P67 336 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 VCX3BQ9H321 246 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 SSR3Q9UNL2 185 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 KLF12Q9Y4X4 402 aa4.07□□□□□ -1.76
SDCBP-203ENST00000424270 TRAV8-2A0A0B4J237 113 aa4.06□□□□□ -1.76
SDCBP-203ENST00000424270 H3BS24 57 aa4.06□□□□□ -1.76
SDCBP-203ENST00000424270 TAAR5O14804 337 aa4.06□□□□□ -1.76
SDCBP-203ENST00000424270 SFTA3P0C7M3 94 aa4.06□□□□□ -1.76
SDCBP-203ENST00000424270 ORM2P19652 201 aa4.06□□□□□ -1.76
SDCBP-203ENST00000424270 TRAM1Q15629 374 aa4.06□□□□□ -1.76
SDCBP-203ENST00000424270 FAM219AQ8IW50 185 aa4.06□□□□□ -1.76
SDCBP-203ENST00000424270 PYDC1Q8WXC3 89 aa4.06□□□□□ -1.76
SDCBP-203ENST00000424270 C9orf16Q9BUW7 83 aa4.06□□□□□ -1.76
SDCBP-203ENST00000424270 TMEM147Q9BVK8 224 aa4.06□□□□□ -1.76
SDCBP-203ENST00000424270 S100A14Q9HCY8 104 aa4.06□□□□□ -1.76
SDCBP-203ENST00000424270 BATF3Q9NR55 127 aa4.06□□□□□ -1.76
SDCBP-203ENST00000424270 TRAV18A0A075B6X5 111 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 TRAV26-2A0A0B4J265 109 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 SMIM30A4D0T7 59 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 RNF222A6NCQ9 220 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 FABP12A6NFH5 140 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 RGS10O43665 173 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 SPINK4O60575 86 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 NXPH3O95157 252 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 IGKV1-39P01597 117 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 PMP2P02689 132 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 IGKV1D-39P04432 117 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 PGAM2P15259 253 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 PSMA1P25786 263 aaKnown RBP4.05□□□□□ -1.76
SDCBP-203ENST00000424270 RFX2P48378 723 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 SPCS3P61009 180 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms