RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 OR5AC2Q9NZP5 309 aa6.75□□□□□ -1.33
NUP50-205ENST00000419387 DOK5Q9P104 306 aa6.75□□□□□ -1.33
NUP50-205ENST00000419387 GOLT1BQ9Y3E0 138 aa6.75□□□□□ -1.33
NUP50-205ENST00000419387 TEX48A0A1B0GUV7 120 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 IGSF23A1L1A6 192 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 FAM24AA6NFZ4 105 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 A8MTW9 85 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 G3V3Q6 166 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 H3BRN7 92 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 SCGB1D2O95969 90 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 HBE1P02100 147 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 METTL15P1P0C7V9 234 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 RAP2BP61225 183 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 CHAC2Q8WUX2 184 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 PPP1R1CQ8WVI7 109 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 NDUFAF3Q9BU61 184 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 SCRT1Q9BWW7 348 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 SLC25A39Q9BZJ4 359 aaPredicted RBP6.74□□□□□ -1.33
NUP50-205ENST00000419387 NPVFQ9HCQ7 196 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 MGAT4CQ9UBM8 478 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 DKK2Q9UBU2 259 aa6.74□□□□□ -1.33
NUP50-205ENST00000419387 LSM5Q9Y4Y9 91 aaKnown RBP6.74□□□□□ -1.33
NUP50-205ENST00000419387 TRAV8-2A0A0B4J237 113 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 SSNA1O43805 119 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 HYPMO75409 117 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 DUSP14O95147 198 aaKnown RBP6.73□□□□□ -1.33
NUP50-205ENST00000419387 MPC2O95563 127 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 P0DMU3 169 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 FAM231AP0DMU4 169 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 FAM231CP0DMU5 169 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 PLP1P60201 277 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 RRAS2P62070 204 aaPredicted RBP6.73□□□□□ -1.33
NUP50-205ENST00000419387 SELENOTP62341 195 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 DLK1P80370 383 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 FGL1Q08830 312 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 RRN3P1Q2M238 152 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 FAM222AQ5U5X8 452 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 IGFL4Q6B9Z1 124 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 AMTNQ6UX39 209 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 TMEM252Q8N6L7 170 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 POM121L12Q8N7R1 296 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 IGF2BP2-AS1Q96M15 143 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 NIPSNAP3BQ9BS92 247 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 SHANK2-AS3Q9BTD1 123 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 LYRM2Q9NU23 88 aaPredicted RBP6.73□□□□□ -1.33
NUP50-205ENST00000419387 HIGD1AQ9Y241 93 aa6.73□□□□□ -1.33
NUP50-205ENST00000419387 LOC102723971A0A1B0GUV8 181 aa6.72□□□□□ -1.33
NUP50-205ENST00000419387 A6NJY4 79 aa6.72□□□□□ -1.33
NUP50-205ENST00000419387 FNDC10F2Z333 226 aa6.72□□□□□ -1.33
NUP50-205ENST00000419387 CST7O76096 145 aa6.72□□□□□ -1.33
NUP50-205ENST00000419387 OR5G3P0C626 314 aa6.72□□□□□ -1.33
NUP50-205ENST00000419387 LINC00869P0C866 280 aa6.72□□□□□ -1.33
NUP50-205ENST00000419387 RPL7P18124 248 aaKnown RBP6.72□□□□□ -1.33
NUP50-205ENST00000419387 CNN1P51911 297 aaKnown RBP6.72□□□□□ -1.33
NUP50-205ENST00000419387 CYCSP99999 105 aaKnown RBP6.72□□□□□ -1.33
NUP50-205ENST00000419387 NHLH2Q02577 135 aa6.72□□□□□ -1.33
NUP50-205ENST00000419387 VWC2Q2TAL6 325 aa6.72□□□□□ -1.33
NUP50-205ENST00000419387 S100A7AQ86SG5 101 aa6.72□□□□□ -1.33
NUP50-205ENST00000419387 RNF182Q8N6D2 247 aa6.72□□□□□ -1.33
NUP50-205ENST00000419387 OR10P1Q8NGE3 313 aa6.72□□□□□ -1.33
NUP50-205ENST00000419387 FAM210BQ96KR6 192 aa6.72□□□□□ -1.33
NUP50-205ENST00000419387 TMEM208Q9BTX3 173 aa6.72□□□□□ -1.33
NUP50-205ENST00000419387 YTHDF2Q9Y5A9 579 aaKnown RBP6.72□□□□□ -1.33
NUP50-205ENST00000419387 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
NUP50-205ENST00000419387 S100A10P60903 97 aa6.71□□□□□ -1.34
NUP50-205ENST00000419387 LRRC37A5PQ49AS3 106 aa6.71□□□□□ -1.34
NUP50-205ENST00000419387 TEPPQ6URK8 271 aa6.71□□□□□ -1.34
NUP50-205ENST00000419387 PATE2Q6UY27 113 aa6.71□□□□□ -1.34
NUP50-205ENST00000419387 Q6ZNX1 250 aa6.71□□□□□ -1.34
NUP50-205ENST00000419387 UHRF2Q96PU4 802 aa6.71□□□□□ -1.34
NUP50-205ENST00000419387 ARL6Q9H0F7 186 aa6.71□□□□□ -1.34
NUP50-205ENST00000419387 MED28Q9H204 178 aa6.71□□□□□ -1.34
NUP50-205ENST00000419387 RNF24Q9Y225 148 aa6.71□□□□□ -1.34
NUP50-205ENST00000419387 HECTD4Q9Y4D8 3996 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 A0A087X0K7 114 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 E5RGE8 158 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 M0R2Z0 102 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 CRXO43186 299 aaPredicted RBP6.7□□□□□ -1.34
NUP50-205ENST00000419387 INSP01308 110 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 SULT1A1P50225 295 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 B2MP61769 119 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 DAD1P61803 113 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 SPINK13Q1W4C9 94 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 PXDC1Q5TGL8 231 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 LINC00336Q6ZUF6 198 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 ZNF738Q8NE65 137 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 LRRC20Q8TCA0 184 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 GGACTQ9BVM4 153 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 ARV1Q9H2C2 271 aa6.7□□□□□ -1.34
NUP50-205ENST00000419387 ZNF705GA8MUZ8 300 aaPredicted RBP6.69□□□□□ -1.34
NUP50-205ENST00000419387 L7N2F9 121 aa6.69□□□□□ -1.34
NUP50-205ENST00000419387 AGPAT2O15120 278 aa6.69□□□□□ -1.34
NUP50-205ENST00000419387 MRPS12O15235 138 aaKnown RBP6.69□□□□□ -1.34
NUP50-205ENST00000419387 PRM2P04554 102 aa6.69□□□□□ -1.34
NUP50-205ENST00000419387 HTN3P15516 51 aa6.69□□□□□ -1.34
NUP50-205ENST00000419387 CAV2P51636 162 aa6.69□□□□□ -1.34
NUP50-205ENST00000419387 RHOBP62745 196 aa6.69□□□□□ -1.34
NUP50-205ENST00000419387 VAMP2P63027 116 aa6.69□□□□□ -1.34
NUP50-205ENST00000419387 HIST1H1AQ02539 215 aaPredicted RBP6.69□□□□□ -1.34
NUP50-205ENST00000419387 SLC38A11Q08AI6 406 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms