RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SLC17A3O00476 420 aa16.37■□□□□ 0.21
PTCD3-203ENST00000409783 CXCL2P19875 107 aa16.37■□□□□ 0.21
PTCD3-203ENST00000409783 HLA-DMBP28068 263 aa16.37■□□□□ 0.21
PTCD3-203ENST00000409783 LCN15Q6UWW0 184 aa16.37■□□□□ 0.21
PTCD3-203ENST00000409783 OR11H4Q8NGC9 324 aa16.37■□□□□ 0.21
PTCD3-203ENST00000409783 RNF183Q96D59 192 aa16.37■□□□□ 0.21
PTCD3-203ENST00000409783 SLC25A2Q9BXI2 301 aa16.37■□□□□ 0.21
PTCD3-203ENST00000409783 MRPL32Q9BYC8 188 aaKnown RBP16.37■□□□□ 0.21
PTCD3-203ENST00000409783 ZNF331Q9NQX6 463 aaPredicted RBP16.37■□□□□ 0.21
PTCD3-203ENST00000409783 RPRMQ9NS64 109 aa16.37■□□□□ 0.21
PTCD3-203ENST00000409783 A0A0J9YX75 114 aa16.36■□□□□ 0.21
PTCD3-203ENST00000409783 H3BTX0 84 aa16.36■□□□□ 0.21
PTCD3-203ENST00000409783 ARPC5O15511 151 aa16.36■□□□□ 0.21
PTCD3-203ENST00000409783 C4BPBP20851 252 aa16.36■□□□□ 0.21
PTCD3-203ENST00000409783 ST6GAL2Q96JF0 529 aa16.36■□□□□ 0.21
PTCD3-203ENST00000409783 ZNF586Q9NXT0 402 aa16.36■□□□□ 0.21
PTCD3-203ENST00000409783 FUT9Q9Y231 359 aa16.36■□□□□ 0.21
PTCD3-203ENST00000409783 SPRY2O43597 315 aa16.35■□□□□ 0.21
PTCD3-203ENST00000409783 CA1P00915 261 aaPredicted RBP16.35■□□□□ 0.21
PTCD3-203ENST00000409783 SPP1P10451 314 aa16.35■□□□□ 0.21
PTCD3-203ENST00000409783 RPL7L1Q6DKI1 246 aaKnown RBP16.35■□□□□ 0.21
PTCD3-203ENST00000409783 MORN3Q6PF18 240 aaPredicted RBP16.35■□□□□ 0.21
PTCD3-203ENST00000409783 HSD17B11Q8NBQ5 300 aa16.35■□□□□ 0.21
PTCD3-203ENST00000409783 WWC2-AS2Q96NR7 200 aa16.35■□□□□ 0.21
PTCD3-203ENST00000409783 CLUHP3Q96NS8 147 aa16.35■□□□□ 0.21
PTCD3-203ENST00000409783 SLC50A1Q9BRV3 221 aa16.35■□□□□ 0.21
PTCD3-203ENST00000409783 EDA2RQ9HAV5 297 aa16.35■□□□□ 0.21
PTCD3-203ENST00000409783 A8MTW9 85 aa16.34■□□□□ 0.21
PTCD3-203ENST00000409783 PYYP10082 97 aa16.34■□□□□ 0.21
PTCD3-203ENST00000409783 ATP6V0CP27449 155 aa16.34■□□□□ 0.21
PTCD3-203ENST00000409783 PSG3Q16557 428 aa16.34■□□□□ 0.21
PTCD3-203ENST00000409783 PSMG3Q9BT73 122 aaPredicted RBP16.34■□□□□ 0.21
PTCD3-203ENST00000409783 MFFQ9GZY8 342 aa16.34■□□□□ 0.21
PTCD3-203ENST00000409783 HMSDA8MTL9 139 aa16.33■□□□□ 0.2
PTCD3-203ENST00000409783 HIST1H1EP10412 219 aaKnown RBP16.33■□□□□ 0.2
PTCD3-203ENST00000409783 GUK1Q16774 197 aa16.33■□□□□ 0.2
PTCD3-203ENST00000409783 OR2G3Q8NGZ4 309 aa16.33■□□□□ 0.2
PTCD3-203ENST00000409783 LRRC20Q8TCA0 184 aa16.33■□□□□ 0.2
PTCD3-203ENST00000409783 CYTL1Q9NRR1 136 aa16.33■□□□□ 0.2
PTCD3-203ENST00000409783 DNAH7Q8WXX0 4024 aa16.32■□□□□ 0.2
PTCD3-203ENST00000409783 TRBV19A0A075B6N1 114 aa16.32■□□□□ 0.2
PTCD3-203ENST00000409783 ZNF253O75346 499 aa16.32■□□□□ 0.2
PTCD3-203ENST00000409783 NDUFB4O95168 129 aa16.32■□□□□ 0.2
PTCD3-203ENST00000409783 RAB2AP61019 212 aa16.32■□□□□ 0.2
PTCD3-203ENST00000409783 EBLN2Q6P2I7 272 aa16.32■□□□□ 0.2
PTCD3-203ENST00000409783 ZNF503Q96F45 646 aa16.32■□□□□ 0.2
PTCD3-203ENST00000409783 M6PRP20645 277 aa16.31■□□□□ 0.2
PTCD3-203ENST00000409783 RHOBP62745 196 aa16.31■□□□□ 0.2
PTCD3-203ENST00000409783 ACOT6Q3I5F7 207 aaPredicted RBP16.31■□□□□ 0.2
PTCD3-203ENST00000409783 CSNK1G2-AS1Q8NCQ2 148 aa16.31■□□□□ 0.2
PTCD3-203ENST00000409783 ZNF738Q8NE65 137 aa16.31■□□□□ 0.2
PTCD3-203ENST00000409783 SH3BGRL3Q9H299 93 aa16.31■□□□□ 0.2
PTCD3-203ENST00000409783 IGKV3-20P01619 116 aa16.3■□□□□ 0.2
PTCD3-203ENST00000409783 ZNF345Q14585 488 aa16.3■□□□□ 0.2
PTCD3-203ENST00000409783 TMEM41BQ5BJD5 291 aa16.3■□□□□ 0.2
PTCD3-203ENST00000409783 AMTNQ6UX39 209 aa16.3■□□□□ 0.2
PTCD3-203ENST00000409783 KCNRGQ8N5I3 272 aa16.3■□□□□ 0.2
PTCD3-203ENST00000409783 FXYD5Q96DB9 178 aa16.3■□□□□ 0.2
PTCD3-203ENST00000409783 OR51M1Q9H341 326 aa16.3■□□□□ 0.2
PTCD3-203ENST00000409783 BORCS7-ASMTA0A0B4J1R7 106 aa16.29■□□□□ 0.2
PTCD3-203ENST00000409783 TAAR5O14804 337 aa16.29■□□□□ 0.2
PTCD3-203ENST00000409783 EIF3GO75821 320 aaKnown RBP eCLIP16.29■□□□□ 0.2
PTCD3-203ENST00000409783 ZNF705DP0CH99 300 aaPredicted RBP16.29■□□□□ 0.2
PTCD3-203ENST00000409783 ZNF705BP0CI00 300 aaPredicted RBP16.29■□□□□ 0.2
PTCD3-203ENST00000409783 PRB4P10163 310 aaPredicted RBP16.29■□□□□ 0.2
PTCD3-203ENST00000409783 PDE6HQ13956 83 aa16.29■□□□□ 0.2
PTCD3-203ENST00000409783 OR4B1Q8NGF8 309 aa16.29■□□□□ 0.2
PTCD3-203ENST00000409783 PAXXQ9BUH6 204 aa16.29■□□□□ 0.2
PTCD3-203ENST00000409783 ZNF705FA8MVS1 300 aaPredicted RBP16.28■□□□□ 0.2
PTCD3-203ENST00000409783 CNN1P51911 297 aaKnown RBP16.28■□□□□ 0.2
PTCD3-203ENST00000409783 NUTF2P61970 127 aaKnown RBP16.28■□□□□ 0.2
PTCD3-203ENST00000409783 SERF2P84101 59 aa16.28■□□□□ 0.2
PTCD3-203ENST00000409783 TCTE3Q8IZS6 198 aa16.28■□□□□ 0.2
PTCD3-203ENST00000409783 OR8A1Q8NGG7 326 aa16.28■□□□□ 0.2
PTCD3-203ENST00000409783 OR10G4Q8NGN3 311 aa16.28■□□□□ 0.2
PTCD3-203ENST00000409783 OR10G9Q8NGN4 311 aa16.28■□□□□ 0.2
PTCD3-203ENST00000409783 OR10G7Q8NGN6 311 aa16.28■□□□□ 0.2
PTCD3-203ENST00000409783 RPUSD4Q96CM3 377 aaKnown RBP16.28■□□□□ 0.2
PTCD3-203ENST00000409783 SLC35B3Q9H1N7 401 aa16.28■□□□□ 0.2
PTCD3-203ENST00000409783 CLEC5AQ9NY25 188 aa16.28■□□□□ 0.2
PTCD3-203ENST00000409783 PRAC2D3DTV9 90 aa16.27■□□□□ 0.2
PTCD3-203ENST00000409783 JTBO76095 146 aa16.27■□□□□ 0.2
PTCD3-203ENST00000409783 OR10J4P0C629 311 aa16.27■□□□□ 0.2
PTCD3-203ENST00000409783 NBEAP1P0C6P0 100 aa16.27■□□□□ 0.2
PTCD3-203ENST00000409783 PSG9Q00887 426 aa16.27■□□□□ 0.2
PTCD3-203ENST00000409783 RPP25LQ8N5L8 163 aaKnown RBP16.27■□□□□ 0.2
PTCD3-203ENST00000409783 BLNKQ8WV28 456 aa16.27■□□□□ 0.2
PTCD3-203ENST00000409783 RNF141Q8WVD5 230 aa16.27■□□□□ 0.2
PTCD3-203ENST00000409783 GNPNAT1Q96EK6 184 aaPredicted RBP16.27■□□□□ 0.2
PTCD3-203ENST00000409783 XCL2Q9UBD3 114 aa16.27■□□□□ 0.2
PTCD3-203ENST00000409783 hCG_2014768A0A024R1R8 64 aa16.26■□□□□ 0.19
PTCD3-203ENST00000409783 DUSP14O95147 198 aaKnown RBP16.26■□□□□ 0.19
PTCD3-203ENST00000409783 FXYD7P58549 80 aa16.26■□□□□ 0.19
PTCD3-203ENST00000409783 KHDC3LQ587J8 217 aa16.26■□□□□ 0.19
PTCD3-203ENST00000409783 FAM122CQ6P4D5 195 aa16.26■□□□□ 0.19
PTCD3-203ENST00000409783 OR7C2O60412 319 aa16.25■□□□□ 0.19
PTCD3-203ENST00000409783 TAS2R45P59539 299 aa16.25■□□□□ 0.19
PTCD3-203ENST00000409783 OR11H2Q8NH07 326 aa16.25■□□□□ 0.19
PTCD3-203ENST00000409783 RARRES2Q99969 163 aa16.25■□□□□ 0.19
PTCD3-203ENST00000409783 ARPC5LQ9BPX5 153 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms