RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 SNRPCP09234 159 aaKnown RBP14.53□□□□□ -0.08
PDLIM2-207ENST00000409417 NUTF2P61970 127 aaKnown RBP14.53□□□□□ -0.08
PDLIM2-207ENST00000409417 GUK1Q16774 197 aa14.53□□□□□ -0.08
PDLIM2-207ENST00000409417 TMEM41BQ5BJD5 291 aa14.53□□□□□ -0.08
PDLIM2-207ENST00000409417 EBLN2Q6P2I7 272 aa14.53□□□□□ -0.08
PDLIM2-207ENST00000409417 MRPL32Q9BYC8 188 aaKnown RBP14.53□□□□□ -0.08
PDLIM2-207ENST00000409417 ZNF331Q9NQX6 463 aaPredicted RBP14.53□□□□□ -0.08
PDLIM2-207ENST00000409417 TIMM9Q9Y5J7 89 aa14.53□□□□□ -0.08
PDLIM2-207ENST00000409417 A0A0J9YX75 114 aa14.52□□□□□ -0.08
PDLIM2-207ENST00000409417 SMLR1H3BR10 107 aa14.52□□□□□ -0.08
PDLIM2-207ENST00000409417 Q6ZNX1 250 aa14.52□□□□□ -0.08
PDLIM2-207ENST00000409417 CLUHP3Q96NS8 147 aa14.52□□□□□ -0.08
PDLIM2-207ENST00000409417 SLC50A1Q9BRV3 221 aa14.52□□□□□ -0.08
PDLIM2-207ENST00000409417 EDA2RQ9HAV5 297 aa14.52□□□□□ -0.08
PDLIM2-207ENST00000409417 F6UB75 175 aa14.51□□□□□ -0.09
PDLIM2-207ENST00000409417 ARPC5O15511 151 aa14.51□□□□□ -0.09
PDLIM2-207ENST00000409417 PSG3Q16557 428 aa14.51□□□□□ -0.09
PDLIM2-207ENST00000409417 MIR17HGQ75NE6 70 aa14.51□□□□□ -0.09
PDLIM2-207ENST00000409417 SAT2Q96F10 170 aaPredicted RBP14.51□□□□□ -0.09
PDLIM2-207ENST00000409417 FAM167A-AS1Q96KT0 104 aa14.51□□□□□ -0.09
PDLIM2-207ENST00000409417 SLC25A2Q9BXI2 301 aa14.51□□□□□ -0.09
PDLIM2-207ENST00000409417 FUT9Q9Y231 359 aa14.51□□□□□ -0.09
PDLIM2-207ENST00000409417 H3BTX0 84 aa14.5□□□□□ -0.09
PDLIM2-207ENST00000409417 C4BPBP20851 252 aa14.5□□□□□ -0.09
PDLIM2-207ENST00000409417 HSD17B11Q8NBQ5 300 aa14.5□□□□□ -0.09
PDLIM2-207ENST00000409417 ZNF738Q8NE65 137 aa14.5□□□□□ -0.09
PDLIM2-207ENST00000409417 ZNF586Q9NXT0 402 aa14.5□□□□□ -0.09
PDLIM2-207ENST00000409417 RFNGQ9Y644 331 aa14.5□□□□□ -0.09
PDLIM2-207ENST00000409417 SLC17A3O00476 420 aa14.5□□□□□ -0.09
PDLIM2-207ENST00000409417 ZNF253O75346 499 aa14.5□□□□□ -0.09
PDLIM2-207ENST00000409417 HIST1H1EP10412 219 aaKnown RBP14.5□□□□□ -0.09
PDLIM2-207ENST00000409417 OR4B1Q8NGF8 309 aa14.5□□□□□ -0.09
PDLIM2-207ENST00000409417 MFFQ9GZY8 342 aa14.5□□□□□ -0.09
PDLIM2-207ENST00000409417 CLEC5AQ9NY25 188 aa14.5□□□□□ -0.09
PDLIM2-207ENST00000409417 TRBV19A0A075B6N1 114 aa14.49□□□□□ -0.09
PDLIM2-207ENST00000409417 IGKV3-20P01619 116 aa14.49□□□□□ -0.09
PDLIM2-207ENST00000409417 PYYP10082 97 aa14.49□□□□□ -0.09
PDLIM2-207ENST00000409417 HLA-DMBP28068 263 aa14.49□□□□□ -0.09
PDLIM2-207ENST00000409417 RHOBP62745 196 aa14.49□□□□□ -0.09
PDLIM2-207ENST00000409417 ACOT6Q3I5F7 207 aaPredicted RBP14.49□□□□□ -0.09
PDLIM2-207ENST00000409417 OR2G3Q8NGZ4 309 aa14.49□□□□□ -0.09
PDLIM2-207ENST00000409417 PSMG3Q9BT73 122 aaPredicted RBP14.49□□□□□ -0.09
PDLIM2-207ENST00000409417 C1QTNF4Q9BXJ3 329 aa14.49□□□□□ -0.09
PDLIM2-207ENST00000409417 BORCS7-ASMTA0A0B4J1R7 106 aa14.48□□□□□ -0.09
PDLIM2-207ENST00000409417 M6PRP20645 277 aa14.48□□□□□ -0.09
PDLIM2-207ENST00000409417 ATP6V0CP27449 155 aa14.48□□□□□ -0.09
PDLIM2-207ENST00000409417 PDE6HQ13956 83 aa14.48□□□□□ -0.09
PDLIM2-207ENST00000409417 RPL7L1Q6DKI1 246 aaKnown RBP14.48□□□□□ -0.09
PDLIM2-207ENST00000409417 RPUSD4Q96CM3 377 aaKnown RBP14.48□□□□□ -0.09
PDLIM2-207ENST00000409417 OR51M1Q9H341 326 aa14.48□□□□□ -0.09
PDLIM2-207ENST00000409417 A8MTW9 85 aa14.47□□□□□ -0.09
PDLIM2-207ENST00000409417 TAAR5O14804 337 aa14.47□□□□□ -0.09
PDLIM2-207ENST00000409417 DUSP14O95147 198 aaKnown RBP14.47□□□□□ -0.09
PDLIM2-207ENST00000409417 PSG9Q00887 426 aa14.47□□□□□ -0.09
PDLIM2-207ENST00000409417 CSNK1G2-AS1Q8NCQ2 148 aa14.47□□□□□ -0.09
PDLIM2-207ENST00000409417 OR11H2Q8NH07 326 aa14.47□□□□□ -0.09
PDLIM2-207ENST00000409417 RARRES2Q99969 163 aa14.47□□□□□ -0.09
PDLIM2-207ENST00000409417 HMSDA8MTL9 139 aa14.46□□□□□ -0.09
PDLIM2-207ENST00000409417 CNN1P51911 297 aaKnown RBP14.46□□□□□ -0.09
PDLIM2-207ENST00000409417 SERF2P84101 59 aa14.46□□□□□ -0.09
PDLIM2-207ENST00000409417 OR11H4Q8NGC9 324 aa14.46□□□□□ -0.09
PDLIM2-207ENST00000409417 OR8A1Q8NGG7 326 aa14.46□□□□□ -0.09
PDLIM2-207ENST00000409417 GNPNAT1Q96EK6 184 aaPredicted RBP14.46□□□□□ -0.09
PDLIM2-207ENST00000409417 PAXXQ9BUH6 204 aa14.46□□□□□ -0.09
PDLIM2-207ENST00000409417 XCL2Q9UBD3 114 aa14.46□□□□□ -0.09
PDLIM2-207ENST00000409417 JTBO76095 146 aa14.45□□□□□ -0.1
PDLIM2-207ENST00000409417 NDUFB4O95168 129 aa14.45□□□□□ -0.1
PDLIM2-207ENST00000409417 NBEAP1P0C6P0 100 aa14.45□□□□□ -0.1
PDLIM2-207ENST00000409417 TAS2R45P59539 299 aa14.45□□□□□ -0.1
PDLIM2-207ENST00000409417 RAB2AP61019 212 aa14.45□□□□□ -0.1
PDLIM2-207ENST00000409417 ZNF345Q14585 488 aa14.45□□□□□ -0.1
PDLIM2-207ENST00000409417 BLNKQ8WV28 456 aa14.45□□□□□ -0.1
PDLIM2-207ENST00000409417 RNF141Q8WVD5 230 aa14.45□□□□□ -0.1
PDLIM2-207ENST00000409417 ZNF705FA8MVS1 300 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 OR7C2O60412 319 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 ZNF705DP0CH99 300 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 ZNF705BP0CI00 300 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 KHDC3LQ587J8 217 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 AMTNQ6UX39 209 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 OR10G4Q8NGN3 311 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 OR10G9Q8NGN4 311 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 OR10G7Q8NGN6 311 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 MUC7Q8TAX7 377 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 FXYD5Q96DB9 178 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 ST6GAL2Q96JF0 529 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 SLC35B3Q9H1N7 401 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 SH3BGRL3Q9H299 93 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 A0A1W2PPV4 95 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 MBP02144 154 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 OR10J4P0C629 311 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 HIST1H1AQ02539 215 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 KCNRGQ8N5I3 272 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 ZNF503Q96F45 646 aa14.44□□□□□ -0.1
PDLIM2-207ENST00000409417 A0A0J9YWU9 116 aa14.43□□□□□ -0.1
PDLIM2-207ENST00000409417 FXYD7P58549 80 aa14.43□□□□□ -0.1
PDLIM2-207ENST00000409417 MRPL53Q96EL3 112 aaKnown RBP14.43□□□□□ -0.1
PDLIM2-207ENST00000409417 CYTL1Q9NRR1 136 aa14.43□□□□□ -0.1
PDLIM2-207ENST00000409417 ZNF705EA8MWA4 302 aaPredicted RBP14.42□□□□□ -0.1
PDLIM2-207ENST00000409417 UBE2L3P68036 154 aaKnown RBP14.42□□□□□ -0.1
PDLIM2-207ENST00000409417 RPP25LQ8N5L8 163 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 413 ms