RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 GPR132Q9UNW8 380 aa11.35□□□□□ -0.59
CHMP3-203ENST00000409225 NCS1P62166 190 aa11.34□□□□□ -0.59
CHMP3-203ENST00000409225 Q6ZTI0 123 aa11.34□□□□□ -0.59
CHMP3-203ENST00000409225 RPUSD4Q96CM3 377 aaKnown RBP11.34□□□□□ -0.59
CHMP3-203ENST00000409225 C20orf144Q9BQM9 153 aa11.34□□□□□ -0.59
CHMP3-203ENST00000409225 EXTL2Q9UBQ6 330 aa11.34□□□□□ -0.59
CHMP3-203ENST00000409225 A0A0B4J2A0 478 aa11.33□□□□□ -0.6
CHMP3-203ENST00000409225 DISC1C4P0D8 188 aa11.33□□□□□ -0.6
CHMP3-203ENST00000409225 RPL7P18124 248 aaKnown RBP11.33□□□□□ -0.6
CHMP3-203ENST00000409225 GFI1BQ5VTD9 330 aa11.33□□□□□ -0.6
CHMP3-203ENST00000409225 SHANK2-AS3Q9BTD1 123 aa11.33□□□□□ -0.6
CHMP3-203ENST00000409225 SHPKQ9UHJ6 478 aa11.33□□□□□ -0.6
CHMP3-203ENST00000409225 KCNIP3Q9Y2W7 256 aa11.33□□□□□ -0.6
CHMP3-203ENST00000409225 TRGV2A0A075B6R0 118 aa11.32□□□□□ -0.6
CHMP3-203ENST00000409225 KRTAP29-1A8MX34 341 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-203ENST00000409225 AKR1C4P17516 323 aa11.32□□□□□ -0.6
CHMP3-203ENST00000409225 VBP1P61758 197 aa11.32□□□□□ -0.6
CHMP3-203ENST00000409225 MZT2AQ6P582 158 aa11.32□□□□□ -0.6
CHMP3-203ENST00000409225 CCDC190Q86UF4 302 aa11.32□□□□□ -0.6
CHMP3-203ENST00000409225 HIGD1AQ9Y241 93 aa11.32□□□□□ -0.6
CHMP3-203ENST00000409225 J3KRW8 73 aa11.31□□□□□ -0.6
CHMP3-203ENST00000409225 RAP2BP61225 183 aa11.31□□□□□ -0.6
CHMP3-203ENST00000409225 AKR1C1Q04828 323 aa11.31□□□□□ -0.6
CHMP3-203ENST00000409225 TMEM70Q9BUB7 260 aa11.31□□□□□ -0.6
CHMP3-203ENST00000409225 ICOSQ9Y6W8 199 aa11.31□□□□□ -0.6
CHMP3-203ENST00000409225 A0A087X0K7 114 aa11.3□□□□□ -0.6
CHMP3-203ENST00000409225 PRSS46E5RG02 174 aa11.3□□□□□ -0.6
CHMP3-203ENST00000409225 DAZ2Q13117 558 aaKnown RBP11.3□□□□□ -0.6
CHMP3-203ENST00000409225 SERTAD4-AS1Q5TG53 156 aa11.3□□□□□ -0.6
CHMP3-203ENST00000409225 SYT8Q8NBV8 401 aa11.3□□□□□ -0.6
CHMP3-203ENST00000409225 MSRB1Q9NZV6 116 aa11.3□□□□□ -0.6
CHMP3-203ENST00000409225 TRAV9-2A0A087WT02 112 aa11.29□□□□□ -0.6
CHMP3-203ENST00000409225 IGLV5-52A0A0A0MRZ9 124 aa11.29□□□□□ -0.6
CHMP3-203ENST00000409225 LY96Q9Y6Y9 160 aa11.29□□□□□ -0.6
CHMP3-203ENST00000409225 TRGV1A0A0A0MS02 117 aa11.28□□□□□ -0.6
CHMP3-203ENST00000409225 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
CHMP3-203ENST00000409225 NPIPB6E9PJ23 425 aa11.28□□□□□ -0.6
CHMP3-203ENST00000409225 PAX4O43316 350 aa11.28□□□□□ -0.6
CHMP3-203ENST00000409225 HYPMO75409 117 aa11.28□□□□□ -0.6
CHMP3-203ENST00000409225 IL5P05113 134 aa11.28□□□□□ -0.6
CHMP3-203ENST00000409225 SNRPCP09234 159 aaKnown RBP11.28□□□□□ -0.6
CHMP3-203ENST00000409225 OR5G3P0C626 314 aa11.28□□□□□ -0.6
CHMP3-203ENST00000409225 CYP2G1PQ6ZSU1 146 aa11.28□□□□□ -0.6
CHMP3-203ENST00000409225 OR51S1Q8NGJ8 323 aa11.28□□□□□ -0.6
CHMP3-203ENST00000409225 C15orf40Q8WUR7 153 aa11.28□□□□□ -0.6
CHMP3-203ENST00000409225 LINC00467Q9BRT7 94 aa11.28□□□□□ -0.6
CHMP3-203ENST00000409225 GSN-AS1Q9NRJ2 163 aa11.28□□□□□ -0.6
CHMP3-203ENST00000409225 SMCO3A2RU48 225 aa11.27□□□□□ -0.61
CHMP3-203ENST00000409225 PRAC2D3DTV9 90 aa11.27□□□□□ -0.61
CHMP3-203ENST00000409225 PITX3O75364 302 aa11.27□□□□□ -0.61
CHMP3-203ENST00000409225 AKAIN1P0CW23 69 aa11.27□□□□□ -0.61
CHMP3-203ENST00000409225 RPP30P78346 268 aaKnown RBP11.27□□□□□ -0.61
CHMP3-203ENST00000409225 SSBP1Q04837 148 aaKnown RBP11.27□□□□□ -0.61
CHMP3-203ENST00000409225 LYPD5Q6UWN5 251 aa11.27□□□□□ -0.61
CHMP3-203ENST00000409225 ACOT7LQ6ZUV0 252 aa11.27□□□□□ -0.61
CHMP3-203ENST00000409225 PRRT1Q99946 306 aa11.27□□□□□ -0.61
CHMP3-203ENST00000409225 FUT9Q9Y231 359 aa11.27□□□□□ -0.61
CHMP3-203ENST00000409225 PMS2P5A8MQ11 134 aa11.26□□□□□ -0.61
CHMP3-203ENST00000409225 WRBO00258 174 aa11.26□□□□□ -0.61
CHMP3-203ENST00000409225 ZNF324O75467 553 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-203ENST00000409225 PLA2G1BP04054 148 aaKnown RBP11.26□□□□□ -0.61
CHMP3-203ENST00000409225 LINC00869P0C866 280 aa11.26□□□□□ -0.61
CHMP3-203ENST00000409225 ANXA7P20073 488 aaKnown RBP11.26□□□□□ -0.61
CHMP3-203ENST00000409225 CLVS1Q8IUQ0 354 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-203ENST00000409225 AP3S1Q92572 193 aa11.26□□□□□ -0.61
CHMP3-203ENST00000409225 PYGO2Q9BRQ0 406 aa11.26□□□□□ -0.61
CHMP3-203ENST00000409225 FUNDC2Q9BWH2 189 aa11.26□□□□□ -0.61
CHMP3-203ENST00000409225 VCX3AQ9NNX9 186 aa11.26□□□□□ -0.61
CHMP3-203ENST00000409225 FAM30AQ9NZY2 134 aa11.26□□□□□ -0.61
CHMP3-203ENST00000409225 MED6O75586 246 aa11.25□□□□□ -0.61
CHMP3-203ENST00000409225 IGHV3-53P01767 116 aa11.25□□□□□ -0.61
CHMP3-203ENST00000409225 ANXA3P12429 323 aa11.25□□□□□ -0.61
CHMP3-203ENST00000409225 SRPXP78539 464 aa11.25□□□□□ -0.61
CHMP3-203ENST00000409225 SPANXN5Q5MJ07 72 aa11.25□□□□□ -0.61
CHMP3-203ENST00000409225 CIB3Q96Q77 187 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-203ENST00000409225 ZNF331Q9NQX6 463 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-203ENST00000409225 LRP1Q07954 4544 aaKnown RBP11.25□□□□□ -0.61
CHMP3-203ENST00000409225 LINC00854A0A1B0GVQ3 168 aa11.24□□□□□ -0.61
CHMP3-203ENST00000409225 H3BP45 60 aa11.24□□□□□ -0.61
CHMP3-203ENST00000409225 H3BTX0 84 aa11.24□□□□□ -0.61
CHMP3-203ENST00000409225 MRPS12O15235 138 aaKnown RBP11.24□□□□□ -0.61
CHMP3-203ENST00000409225 CXCL2P19875 107 aa11.24□□□□□ -0.61
CHMP3-203ENST00000409225 LEPP41159 167 aa11.24□□□□□ -0.61
CHMP3-203ENST00000409225 LCN15Q6UWW0 184 aa11.24□□□□□ -0.61
CHMP3-203ENST00000409225 WFDC10BQ8IUB3 73 aa11.24□□□□□ -0.61
CHMP3-203ENST00000409225 C11orf72Q8NBR9 251 aa11.24□□□□□ -0.61
CHMP3-203ENST00000409225 ZNF431Q8TF32 576 aaPredicted RBP11.24□□□□□ -0.61
CHMP3-203ENST00000409225 SLC50A1Q9BRV3 221 aa11.24□□□□□ -0.61
CHMP3-203ENST00000409225 SYNGR2O43760 224 aa11.23□□□□□ -0.61
CHMP3-203ENST00000409225 CT45A10P0DMU9 189 aa11.23□□□□□ -0.61
CHMP3-203ENST00000409225 EVI2AP22794 236 aa11.23□□□□□ -0.61
CHMP3-203ENST00000409225 PLP1P60201 277 aa11.23□□□□□ -0.61
CHMP3-203ENST00000409225 ZNF680Q8NEM1 530 aa11.23□□□□□ -0.61
CHMP3-203ENST00000409225 DEFB104AQ8WTQ1 72 aa11.23□□□□□ -0.61
CHMP3-203ENST00000409225 NTN5Q8WTR8 489 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-203ENST00000409225 SMIM4Q8WVI0 70 aa11.23□□□□□ -0.61
CHMP3-203ENST00000409225 SCGB3A2Q96PL1 93 aa11.23□□□□□ -0.61
CHMP3-203ENST00000409225 ARL6Q9H0F7 186 aa11.23□□□□□ -0.61
CHMP3-203ENST00000409225 A0A087WXM4 84 aa11.22□□□□□ -0.61
CHMP3-203ENST00000409225 SLC17A3O00476 420 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 203.8 ms