RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 PAX4O43316 350 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 ZNF25P17030 456 aaPredicted RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 CDKN1BP46527 198 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 IGF2BP2-AS1Q96M15 143 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 PAM16Q9Y3D7 125 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 C15orf65H3BRN8 121 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 VCYO14598 125 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 LHBP01229 141 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 SCGB1A1P11684 91 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 SSBP2P81877 361 aaPredicted RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 IGHV3-16A0A0C4DH30 117 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 F8WEM9 126 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 LAGE3Q14657 143 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 SPRNQ5BIV9 151 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 LHFPL1Q86WI0 220 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 VPS25Q9BRG1 176 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 OSTCQ9NRP0 149 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 F8W735 103 aaPredicted RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 CCL18P55774 89 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 TRPT1Q86TN4 253 aaKnown RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 TSKUQ8WUA8 353 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 C1orf159Q96HA4 380 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 WFDC1Q9HC57 220 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 CCDC88CQ9P219 2028 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 SRP19P09132 144 aaKnown RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 STAG3L3P0CL85 134 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 SEC11AP67812 179 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 C6orf226Q5I0X4 101 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 LYZL1Q6UWQ5 148 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 RPP25LQ8N5L8 163 aaKnown RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 C14orf178Q8N769 122 aaPredicted RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 LIME1Q9H400 295 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 VSIRQ9H7M9 311 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 TPSG1Q9NRR2 321 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 CNTRLQ7Z7A1 2325 aa3.99□□□□□ -1.77
SCN3A-203ENST00000409101 HELZP42694 1942 aaKnown RBP3.99□□□□□ -1.77
SCN3A-203ENST00000409101 TRAV12-2A0A075B6T6 113 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 A8MWV9 139 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 MMP23AO75900 390 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 Q5BKY6 102 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 TMEM14EPQ6UXP3 125 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SPAG8Q99932 426 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-203ENST00000409101 RNF126Q9BV68 326 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 NMBP08949 121 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 MLANAQ16655 118 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 ATP6V0BQ99437 205 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 ZDBF2Q9HCK1 2354 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 C15orf62A8K5M9 175 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 CD300CQ08708 224 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 NPBQ8NG41 125 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SDHCQ99643 169 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SSBP4Q9BWG4 385 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-203ENST00000409101 CSTL1Q9H114 145 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 JPT2Q9H910 190 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 CABIN1Q9Y6J0 2220 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 A0A096LPF7 62 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 A0A0J9YY99 117 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SPART-AS1P0CW21 52 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 INSL3P51460 131 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SLC25A34Q6PIV7 304 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 TMEM75Q8N9X5 138 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SMPXQ9UHP9 88 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 TMEM256Q8N2U0 113 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 THAP8Q8NA92 274 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 CITED2Q99967 270 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-203ENST00000409101 SPXQ9BT56 116 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 MS4A6AQ9H2W1 248 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 IGHV3-64A0A075B6Q5 118 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 TRAV13-1A0A0B4J241 112 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 GGTLC3B5MD39 225 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 H3BRN7 92 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 HBDP02042 147 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 RPL24P83731 157 aaKnown RBP3.98□□□□□ -1.77
SCN3A-203ENST00000409101 BCL6BQ8N143 479 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-203ENST00000409101 DEFB104AQ8WTQ1 72 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 ZNF524Q96C55 264 aa3.98□□□□□ -1.77
SCN3A-203ENST00000409101 CD300EQ496F6 205 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-203ENST00000409101 ATP5L2Q7Z4Y8 100 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 IMMP2LQ96T52 175 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 NOP10Q9NPE3 64 aaKnown RBP3.97□□□□□ -1.77
SCN3A-203ENST00000409101 IGKV1-6A0A0C4DH72 117 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 FABP2P12104 132 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 ICOSQ9Y6W8 199 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 PTPRDP23468 1912 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 IGKV2D-24A0A075B6R9 120 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 IGHV4OR15-8A0A075B7B6 117 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 A0A087WW49 117 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 TMEM89A2RUT3 159 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 ZNF134P52741 427 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 RPL23P62829 140 aaKnown RBP3.97□□□□□ -1.77
SCN3A-203ENST00000409101 BLCAPP62952 87 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 Q86TA4 180 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 APRG1Q8IVJ8 170 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 NKAPP1Q8N9T2 125 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 C16orf74Q96GX8 76 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 RALGAPA1Q6GYQ0 2036 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 RNF222A6NCQ9 220 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 PFN1P07737 140 aaKnown RBP3.97□□□□□ -1.77
SCN3A-203ENST00000409101 C11orf53Q8IXP5 236 aa3.97□□□□□ -1.77
SCN3A-203ENST00000409101 C5orf56Q8N8D9 126 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms