RNA–Protein interactions for RNA: ENST00000407089.2

SPTLC1P2-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 2, humanhuman

BASIC

Gene SPTLC1P2, Length 121 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P2-201ENST00000407089 FAM219AQ8IW50 185 aa3.38□□□□□ -1.87
SPTLC1P2-201ENST00000407089 Q8N3U1 123 aa3.38□□□□□ -1.87
SPTLC1P2-201ENST00000407089 ATP6V0E2Q8NHE4 81 aa3.38□□□□□ -1.87
SPTLC1P2-201ENST00000407089 ZNF431Q8TF32 576 aaPredicted RBP3.38□□□□□ -1.87
SPTLC1P2-201ENST00000407089 ZNF479Q96JC4 524 aa3.38□□□□□ -1.87
SPTLC1P2-201ENST00000407089 SLC45A2Q9UMX9 530 aa3.38□□□□□ -1.87
SPTLC1P2-201ENST00000407089 COX11Q9Y6N1 276 aa3.38□□□□□ -1.87
SPTLC1P2-201ENST00000407089 TMEM56-RWDD3S4R434 201 aa3.38□□□□□ -1.87
SPTLC1P2-201ENST00000407089 TRAV8-1A0A0A6YYK1 113 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 LINC00854A0A1B0GVQ3 168 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 PRAC2D3DTV9 90 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 PTGES3LE9PB15 166 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 ATG12O94817 140 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 CT45A10P0DMU9 189 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 ORM2P19652 201 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 GPX4P36969 197 aaPredicted RBP3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 NMSQ5H8A3 153 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 GGNBP1Q5YKI7 109 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 ZFP1Q6P2D0 407 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 TEPPQ6URK8 271 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 LYSMD2Q8IV50 215 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 EIF4E3Q8N5X7 224 aaKnown RBP3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 OR5H2Q8NGV7 314 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 LRRC20Q8TCA0 184 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 TP53RKQ96S44 253 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 TRGV9Q99603 122 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 RHBDL2Q9NX52 303 aa3.37□□□□□ -1.87
SPTLC1P2-201ENST00000407089 IGKV1OR2-108A0A075B7D4 117 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 A0A0A6YYH2 397 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 A6NJ64 397 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 NOTOA8MTQ0 251 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 CEBPZOSA8MTT3 80 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 GABARAPH6UMI1 98 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 GABARAPO95166 117 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 CFDP00746 253 aaPredicted RBP3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 GNAO1P09471 354 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 MYL9P24844 172 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 LEPP41159 167 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 UCP3P55916 312 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 MLLT11Q13015 90 aaPredicted RBP3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 TRIM16LQ309B1 348 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 SP6Q3SY56 376 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 IBA57Q5T440 356 aaKnown RBP3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 TMEM182Q6ZP80 229 aaPredicted RBP3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 SDIM1Q6ZPB5 146 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 DAZ4Q86SG3 579 aaKnown RBP3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 C10orf67Q8IYJ2 551 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 DHRSXQ8N5I4 330 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 ZBTB8BQ8NAP8 495 aaPredicted RBP3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 NHLRC2Q8NBF2 726 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 OR10G4Q8NGN3 311 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 OR5H6Q8NGV6 325 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 SLC25A38Q96DW6 304 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 SLC35E1Q96K37 410 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 DNAJC30Q96LL9 226 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 IFT46Q9NQC8 304 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 DAZ3Q9NR90 486 aaKnown RBP3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 TP53TG3Q9ULZ0 132 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 ANAPC10Q9UM13 185 aa3.36□□□□□ -1.87
SPTLC1P2-201ENST00000407089 IGKV2D-24A0A075B6R9 120 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 A0A087X0K7 114 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 C3orf85A0A1B0GTC6 90 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 C7orf71A4D174 169 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 PHOX2AO14813 284 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 CIB2O75838 187 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 SLC25A5P05141 298 aaKnown RBP3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 PFN1P07737 140 aaKnown RBP3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 RPL7P18124 248 aaKnown RBP3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 TAS2R46P59540 309 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 RND3P61587 244 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 MEF2DQ14814 521 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 TOR2AQ5JU69 321 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 FAM122CQ6P4D5 195 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 REG3GQ6UW15 175 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 C8orf59Q8N0T1 100 aaPredicted RBP3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 C9orf163Q8N9P6 203 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 OR10P1Q8NGE3 313 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 ODF3Q96PU9 254 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 MGLLQ99685 303 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 SHANK2-AS3Q9BTD1 123 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 TMEM147Q9BVK8 224 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 VAX2Q9UIW0 290 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 KIF25-AS1Q9Y6Z4 181 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 U3KQ87 197 aa3.35□□□□□ -1.87
SPTLC1P2-201ENST00000407089 TRDV1A0A1B0GX56 115 aa3.34□□□□□ -1.87
SPTLC1P2-201ENST00000407089 CRYM-AS1A6NIL9 109 aa3.34□□□□□ -1.87
SPTLC1P2-201ENST00000407089 GGTLC3B5MD39 225 aa3.34□□□□□ -1.87
SPTLC1P2-201ENST00000407089 H3BRN7 92 aa3.34□□□□□ -1.87
SPTLC1P2-201ENST00000407089 MPDU1O75352 247 aa3.34□□□□□ -1.87
SPTLC1P2-201ENST00000407089 PITX3O75364 302 aa3.34□□□□□ -1.87
SPTLC1P2-201ENST00000407089 PGAM2P15259 253 aa3.34□□□□□ -1.87
SPTLC1P2-201ENST00000407089 PI3P19957 117 aa3.34□□□□□ -1.87
SPTLC1P2-201ENST00000407089 HLA-DMAP28067 261 aa3.34□□□□□ -1.87
SPTLC1P2-201ENST00000407089 S100A7P31151 101 aa3.34□□□□□ -1.87
SPTLC1P2-201ENST00000407089 RNASE4P34096 147 aaKnown RBP3.34□□□□□ -1.87
SPTLC1P2-201ENST00000407089 PIGPP57054 158 aa3.34□□□□□ -1.87
SPTLC1P2-201ENST00000407089 TSPAN5P62079 268 aa3.34□□□□□ -1.87
SPTLC1P2-201ENST00000407089 CIRBPQ14011 172 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms