RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 GUSBP1Q15486 140 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 HEPN1Q6WQI6 88 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 PRIMA1Q86XR5 153 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 TICRRQ7Z2Z1 1910 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 MSMBP08118 114 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 HAPLN4Q86UW8 402 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 A8MWV9 139 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 CR1LQ2VPA4 569 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 PSG3Q16557 428 aa11.16□□□□□ -0.62
VAPA-202ENST00000400000 GAGE2EQ4V326 116 aa11.16□□□□□ -0.62
VAPA-202ENST00000400000 MTURNQ8N3F0 131 aa11.16□□□□□ -0.62
VAPA-202ENST00000400000 OSTCQ9NRP0 149 aa11.16□□□□□ -0.62
VAPA-202ENST00000400000 GAGE2DQ9UEU5 116 aa11.16□□□□□ -0.62
VAPA-202ENST00000400000 IGKV1-5P01602 117 aa11.16□□□□□ -0.62
VAPA-202ENST00000400000 PTPRDP23468 1912 aa11.16□□□□□ -0.62
VAPA-202ENST00000400000 LINC00587B1AMM8 73 aa11.16□□□□□ -0.62
VAPA-202ENST00000400000 CFHR2P36980 270 aa11.16□□□□□ -0.62
VAPA-202ENST00000400000 GTF3C1Q12789 2109 aa11.16□□□□□ -0.62
VAPA-202ENST00000400000 CARHSP1Q9Y2V2 147 aaKnown RBP11.16□□□□□ -0.62
VAPA-202ENST00000400000 TRAV9-2A0A087WT02 112 aa11.16□□□□□ -0.62
VAPA-202ENST00000400000 BCL6BQ8N143 479 aaPredicted RBP11.16□□□□□ -0.62
VAPA-202ENST00000400000 AGMATQ9BSE5 352 aa11.16□□□□□ -0.62
VAPA-202ENST00000400000 HIST1H2BKO60814 126 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 HIST1H2BJP06899 126 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 HIST1H2BOP23527 126 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 HIST1H2BBP33778 126 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 HIST1H2BDP58876 126 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 HIST1H2BCP62807 126 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 HIST2H2BEQ16778 126 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.15□□□□□ -0.62
VAPA-202ENST00000400000 FAM120AOSQ5T036 256 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 HIST1H2BHQ93079 126 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 RNF166Q96A37 237 aaPredicted RBP11.15□□□□□ -0.62
VAPA-202ENST00000400000 ATP6V0BQ99437 205 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 HIST1H2BNQ99877 126 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 HIST1H2BMQ99879 126 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 TNFRSF6BO95407 300 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 RASL10AQ92737 203 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 AZU1P20160 251 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 IGF2BP2-AS1Q96M15 143 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 Q9HAA7 133 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 LEPROTO15243 131 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 DEFB105AQ8NG35 78 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 NRGNQ92686 78 aa11.15□□□□□ -0.62
VAPA-202ENST00000400000 RALGAPA2Q2PPJ7 1873 aa11.15□□□□□ -0.63
VAPA-202ENST00000400000 TMEM213A2RRL7 107 aa11.15□□□□□ -0.63
VAPA-202ENST00000400000 GNB1LQ9BYB4 327 aa11.15□□□□□ -0.63
VAPA-202ENST00000400000 C2orf82Q6UX34 121 aa11.14□□□□□ -0.63
VAPA-202ENST00000400000 TMEM256Q8N2U0 113 aa11.14□□□□□ -0.63
VAPA-202ENST00000400000 TMEM126AQ9H061 195 aa11.14□□□□□ -0.63
VAPA-202ENST00000400000 GVINP1Q7Z2Y8 2422 aa11.14□□□□□ -0.63
VAPA-202ENST00000400000 LINC01619G3V211 115 aa11.14□□□□□ -0.63
VAPA-202ENST00000400000 MINOS1Q5TGZ0 78 aa11.14□□□□□ -0.63
VAPA-202ENST00000400000 MINOS1-NBL1R4GNA1 71 aa11.14□□□□□ -0.63
VAPA-202ENST00000400000 IGHV4-4A0A075B6R2 117 aa11.14□□□□□ -0.63
VAPA-202ENST00000400000 PRB2P02812 416 aaPredicted RBP11.14□□□□□ -0.63
VAPA-202ENST00000400000 MDS2Q8NDY4 140 aa11.14□□□□□ -0.63
VAPA-202ENST00000400000 A0A087WWC5 75 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 SPRY2O43597 315 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 A0A0G2JRQ6 117 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 K7ENP7 123 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 EP300Q09472 2414 aaPredicted RBP11.13□□□□□ -0.63
VAPA-202ENST00000400000 TRAV12-1A0A0B4J245 112 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 IGKV1-39P01597 117 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 IGKV1D-39P04432 117 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 ARMS2P0C7Q2 107 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 CSRP3P50461 194 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 PMVKQ15126 192 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 PRSS57Q6UWY2 283 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 STPG4Q8N801 248 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 TIMM21Q9BVV7 248 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 WDR83OSQ9Y284 106 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 TMEM238C9JI98 176 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 DEFB136Q30KP8 78 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 THAP8Q8NA92 274 aa11.13□□□□□ -0.63
VAPA-202ENST00000400000 DLX4Q92988 240 aaPredicted RBP11.12□□□□□ -0.63
VAPA-202ENST00000400000 DYSFO75923 2080 aa11.12□□□□□ -0.63
VAPA-202ENST00000400000 PNRC2Q9NPJ4 139 aaKnown RBP11.12□□□□□ -0.63
VAPA-202ENST00000400000 CNOT1A5YKK6 2376 aaKnown RBP11.12□□□□□ -0.63
VAPA-202ENST00000400000 VCYO14598 125 aa11.12□□□□□ -0.63
VAPA-202ENST00000400000 ID3Q02535 119 aa11.12□□□□□ -0.63
VAPA-202ENST00000400000 FAM90A2PQ658T7 463 aa11.12□□□□□ -0.63
VAPA-202ENST00000400000 Q6P435 159 aa11.12□□□□□ -0.63
VAPA-202ENST00000400000 RASL11AQ6T310 242 aa11.12□□□□□ -0.63
VAPA-202ENST00000400000 SNHG12Q9BXW3 62 aa11.12□□□□□ -0.63
VAPA-202ENST00000400000 DOCK11Q5JSL3 2073 aa11.12□□□□□ -0.63
VAPA-202ENST00000400000 NDUFS5O43920 106 aa11.12□□□□□ -0.63
VAPA-202ENST00000400000 SLC25A16P16260 332 aa11.12□□□□□ -0.63
VAPA-202ENST00000400000 NKAPP1Q8N9T2 125 aa11.12□□□□□ -0.63
VAPA-202ENST00000400000 CHCHD1Q96BP2 118 aaKnown RBP11.12□□□□□ -0.63
VAPA-202ENST00000400000 LTBP1Q14766 1721 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 LGALS1P09382 135 aaKnown RBP11.11□□□□□ -0.63
VAPA-202ENST00000400000 DAZ1Q9NQZ3 744 aaKnown RBP11.11□□□□□ -0.63
VAPA-202ENST00000400000 TMEM242Q9NWH2 141 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 ADAMTS7Q9UKP4 1686 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 IGLV3-32A0A0A0MS00 114 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 FAM223BA6NKX1 122 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 M0R1W7 72 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms