RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 RFNGQ9Y644 331 aa6.15□□□□□ -1.42
BRCC3-205ENST00000399026 RNF222A6NCQ9 220 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 F6UB75 175 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 SLC17A3O00476 420 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 MRPS12O15235 138 aaKnown RBP6.14□□□□□ -1.43
BRCC3-205ENST00000399026 MPDU1O75352 247 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 CA1P00915 261 aaPredicted RBP6.14□□□□□ -1.43
BRCC3-205ENST00000399026 RPL7P18124 248 aaKnown RBP6.14□□□□□ -1.43
BRCC3-205ENST00000399026 C4BPBP20851 252 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 HLA-DMBP28068 263 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 S100A7P31151 101 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 RPL29P47914 159 aaKnown RBP6.14□□□□□ -1.43
BRCC3-205ENST00000399026 APOC4P55056 127 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 CMC4P56277 68 aaPredicted RBP6.14□□□□□ -1.43
BRCC3-205ENST00000399026 ANKRD39Q53RE8 183 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 PXDC1Q5TGL8 231 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 GDF5OSQ5U4N7 250 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 Q6ZRG5 221 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 TRPT1Q86TN4 253 aaKnown RBP6.14□□□□□ -1.43
BRCC3-205ENST00000399026 OR1L4Q8NGR5 311 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 C16orf92Q96LL3 132 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 GPR82Q96P67 336 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 PFDN5Q99471 154 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 AGRNO00468 2067 aa6.14□□□□□ -1.43
BRCC3-205ENST00000399026 A0A087X0K7 114 aa6.13□□□□□ -1.43
BRCC3-205ENST00000399026 TRAV8-2A0A0B4J237 113 aa6.13□□□□□ -1.43
BRCC3-205ENST00000399026 EIF3GO75821 320 aaKnown RBP eCLIP6.13□□□□□ -1.43
BRCC3-205ENST00000399026 IFNA5P01569 189 aa6.13□□□□□ -1.43
BRCC3-205ENST00000399026 IGKV3-20P01619 116 aa6.13□□□□□ -1.43
BRCC3-205ENST00000399026 ID1P41134 155 aa6.13□□□□□ -1.43
BRCC3-205ENST00000399026 MEOX2P50222 304 aa6.13□□□□□ -1.43
BRCC3-205ENST00000399026 ZNF709Q8N972 641 aa6.13□□□□□ -1.43
BRCC3-205ENST00000399026 ASB13Q8WXK3 278 aa6.13□□□□□ -1.43
BRCC3-205ENST00000399026 AQP10Q96PS8 301 aa6.13□□□□□ -1.43
BRCC3-205ENST00000399026 DNAJC4Q9NNZ3 241 aa6.13□□□□□ -1.43
BRCC3-205ENST00000399026 KCNIP2Q9NS61 270 aa6.13□□□□□ -1.43
BRCC3-205ENST00000399026 hCG_2014768A0A024R1R8 64 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 KIR2DL5BA0A0G2JN68 375 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 KIR2DL5BA0A0G2JPC4 375 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 C17orf112F2Z3M2 114 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 ISLRO14498 428 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 ARPC5O15511 151 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 PYYP10082 97 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 HLA-DRB4P13762 266 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 FXYD7P58549 80 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 FFAR4Q5NUL3 377 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 FAM78BQ5VT40 261 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 MIR17HGQ75NE6 70 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 S100A7AQ86SG5 101 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 BPIFA4PQ86YQ2 179 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 KIR2DL5AQ8N109 375 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 HSD17B11Q8NBQ5 300 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 KIR2DL5BQ8NHK3 375 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 SCGB1C1Q8TD33 95 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 WWC2-AS2Q96NR7 200 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 OVOL2Q9BRP0 275 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 SLC25A2Q9BXI2 301 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 CSTL1Q9H114 145 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 CLEC5AQ9NY25 188 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 TNFSF18Q9UNG2 199 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 HLA-DRB4X5D2U9 266 aa6.12□□□□□ -1.43
BRCC3-205ENST00000399026 H3BMM0 161 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 H3BQ15 152 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 SPRY2O43597 315 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 GIG44P09565 113 aaPredicted RBP6.11□□□□□ -1.43
BRCC3-205ENST00000399026 ZNF705DP0CH99 300 aaPredicted RBP6.11□□□□□ -1.43
BRCC3-205ENST00000399026 ZNF705BP0CI00 300 aaPredicted RBP6.11□□□□□ -1.43
BRCC3-205ENST00000399026 IGLC2P0DOY2 106 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 RAB2AP61019 212 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 SAMD13Q5VXD3 122 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 LCN15Q6UWW0 184 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 FOXI2Q6ZQN5 318 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 INO80EQ8NBZ0 244 aaPredicted RBP6.11□□□□□ -1.43
BRCC3-205ENST00000399026 ZNF738Q8NE65 137 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 OR4B1Q8NGF8 309 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 LRRC20Q8TCA0 184 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 GATAD1Q8WUU5 269 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 PARD6GQ9BYG4 376 aaPredicted RBP6.11□□□□□ -1.43
BRCC3-205ENST00000399026 SH3BGRL3Q9H299 93 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 SAV1Q9H4B6 383 aaPredicted RBP6.11□□□□□ -1.43
BRCC3-205ENST00000399026 SEPSECSQ9HD40 501 aaKnown RBP6.11□□□□□ -1.43
BRCC3-205ENST00000399026 RPRMQ9NS64 109 aa6.11□□□□□ -1.43
BRCC3-205ENST00000399026 A0A0J9YX75 114 aa6.1□□□□□ -1.43
BRCC3-205ENST00000399026 UBE2CO00762 179 aa6.1□□□□□ -1.43
BRCC3-205ENST00000399026 SPP1P10451 314 aa6.1□□□□□ -1.43
BRCC3-205ENST00000399026 CXCL2P19875 107 aa6.1□□□□□ -1.43
BRCC3-205ENST00000399026 HIST1H1AQ02539 215 aaPredicted RBP6.1□□□□□ -1.43
BRCC3-205ENST00000399026 ZNF266Q14584 549 aa6.1□□□□□ -1.43
BRCC3-205ENST00000399026 RPL7L1Q6DKI1 246 aaKnown RBP6.1□□□□□ -1.43
BRCC3-205ENST00000399026 Q6ZWC4 215 aa6.1□□□□□ -1.43
BRCC3-205ENST00000399026 BLNKQ8WV28 456 aa6.1□□□□□ -1.43
BRCC3-205ENST00000399026 RNF183Q96D59 192 aa6.1□□□□□ -1.43
BRCC3-205ENST00000399026 MRPL32Q9BYC8 188 aaKnown RBP6.1□□□□□ -1.43
BRCC3-205ENST00000399026 EDA2RQ9HAV5 297 aa6.1□□□□□ -1.43
BRCC3-205ENST00000399026 ZNF586Q9NXT0 402 aa6.1□□□□□ -1.43
BRCC3-205ENST00000399026 RNF24Q9Y225 148 aa6.1□□□□□ -1.43
BRCC3-205ENST00000399026 FUT9Q9Y231 359 aa6.1□□□□□ -1.43
BRCC3-205ENST00000399026 STARD9Q9P2P6 4700 aa6.1□□□□□ -1.43
BRCC3-205ENST00000399026 A0A0J9YWU9 116 aa6.09□□□□□ -1.43
BRCC3-205ENST00000399026 ZNF705FA8MVS1 300 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms