RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 RNASE8Q8TDE3 154 aaKnown RBP6.45□□□□□ -1.38
NEDD9-203ENST00000397378 TMEM263Q8WUH6 116 aaKnown RBP6.45□□□□□ -1.38
NEDD9-203ENST00000397378 GPR82Q96P67 336 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 KRTAP9-2Q9BYQ4 174 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 SLC25A39Q9BZJ4 359 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-203ENST00000397378 NAA60Q9H7X0 242 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 NOP10Q9NPE3 64 aaKnown RBP6.45□□□□□ -1.38
NEDD9-203ENST00000397378 COMMD3Q9UBI1 195 aa6.45□□□□□ -1.38
NEDD9-203ENST00000397378 IGKV1OR2-108A0A075B7D4 117 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 TRAV8-2A0A0B4J237 113 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 TNFAIP8O95379 198 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 OR2F1Q13607 317 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 NEDD8Q15843 81 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 TMEM268Q5VZI3 342 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 GGNBP1Q5YKI7 109 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 THAP8Q8NA92 274 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 OR4D10Q8NGI6 311 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 OR1B1Q8NGR6 318 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 DTD1Q8TEA8 209 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 RTBDNQ9BSG5 229 aaPredicted RBP6.44□□□□□ -1.38
NEDD9-203ENST00000397378 TMEM70Q9BUB7 260 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 SLC25A22Q9H936 323 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 HSPB7Q9UBY9 170 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 MTFP1Q9UDX5 166 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 C14orf166Q9Y224 244 aaKnown RBP6.44□□□□□ -1.38
NEDD9-203ENST00000397378 TMEM56-RWDD3S4R434 201 aa6.44□□□□□ -1.38
NEDD9-203ENST00000397378 LRP1Q07954 4544 aaKnown RBP6.44□□□□□ -1.38
NEDD9-203ENST00000397378 A0A0J9YY99 117 aa6.43□□□□□ -1.38
NEDD9-203ENST00000397378 PRB4P10163 310 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-203ENST00000397378 HTN1P15515 57 aa6.43□□□□□ -1.38
NEDD9-203ENST00000397378 HOXA5P20719 270 aa6.43□□□□□ -1.38
NEDD9-203ENST00000397378 S100A7P31151 101 aa6.43□□□□□ -1.38
NEDD9-203ENST00000397378 SURF2Q15527 256 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-203ENST00000397378 SCGB2B2Q4G0G5 96 aa6.43□□□□□ -1.38
NEDD9-203ENST00000397378 IGFL4Q6B9Z1 124 aa6.43□□□□□ -1.38
NEDD9-203ENST00000397378 LINC00528Q8N1L1 170 aa6.43□□□□□ -1.38
NEDD9-203ENST00000397378 RNF182Q8N6D2 247 aa6.43□□□□□ -1.38
NEDD9-203ENST00000397378 TMEM229BQ8NBD8 167 aa6.43□□□□□ -1.38
NEDD9-203ENST00000397378 OR8A1Q8NGG7 326 aa6.43□□□□□ -1.38
NEDD9-203ENST00000397378 OR52I2Q8NH67 350 aa6.43□□□□□ -1.38
NEDD9-203ENST00000397378 IL22RA2Q969J5 263 aa6.43□□□□□ -1.38
NEDD9-203ENST00000397378 C20orf144Q9BQM9 153 aa6.43□□□□□ -1.38
NEDD9-203ENST00000397378 A0A087WTM6 91 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 CRYM-AS1A6NIL9 109 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 H7BYZ3 331 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 SIVA1O15304 175 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 HPGDSO60760 199 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 RAB3DO95716 219 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 CDKN1BP46527 198 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 CCR6P51684 374 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 TAS2R19P59542 299 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 LSM3P62310 102 aaKnown RBP6.42□□□□□ -1.38
NEDD9-203ENST00000397378 RHOBP62745 196 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 SMCO1Q147U7 214 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 GPR107Q5VW38 600 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 STEAP1BQ6NZ63 245 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-203ENST00000397378 ZNF738Q8NE65 137 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 RBKSQ9H477 322 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 Q9H521 79 aa6.42□□□□□ -1.38
NEDD9-203ENST00000397378 A0A096LPF7 62 aa6.41□□□□□ -1.38
NEDD9-203ENST00000397378 WRBO00258 174 aa6.41□□□□□ -1.38
NEDD9-203ENST00000397378 ASIPP42127 132 aa6.41□□□□□ -1.38
NEDD9-203ENST00000397378 RAB11AP62491 216 aa6.41□□□□□ -1.38
NEDD9-203ENST00000397378 HIST1H1AQ02539 215 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-203ENST00000397378 NFE4Q86UQ8 179 aa6.41□□□□□ -1.38
NEDD9-203ENST00000397378 BPIFCQ8NFQ6 507 aa6.41□□□□□ -1.38
NEDD9-203ENST00000397378 YIPF6Q96EC8 236 aa6.41□□□□□ -1.38
NEDD9-203ENST00000397378 GPR132Q9UNW8 380 aa6.41□□□□□ -1.38
NEDD9-203ENST00000397378 A0A0B4J2A0 478 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 GAGE12BA1L429 117 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 GAGE7O76087 117 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 RLN2P04090 185 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 GAGE12FP0CL80 117 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 GAGE12GP0CL81 117 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 GAGE12IP0CL82 117 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 RPL7P18124 248 aaKnown RBP6.4□□□□□ -1.38
NEDD9-203ENST00000397378 ORM2P19652 201 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 CXCL3P19876 107 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 FGL1Q08830 312 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 PSG3Q16557 428 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 C15orf40Q8WUR7 153 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 CHAC2Q8WUX2 184 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 VSIG2Q96IQ7 327 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 TMEM147Q9BVK8 224 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 SHPKQ9UHJ6 478 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 KCNIP3Q9Y2W7 256 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 TNFRSF18Q9Y5U5 241 aa6.4□□□□□ -1.38
NEDD9-203ENST00000397378 A0A087X0K7 114 aa6.39□□□□□ -1.39
NEDD9-203ENST00000397378 IGLV5-52A0A0A0MRZ9 124 aa6.39□□□□□ -1.39
NEDD9-203ENST00000397378 SNURFLB1AK76 121 aa6.39□□□□□ -1.39
NEDD9-203ENST00000397378 FAM25AB3EWG3 89 aa6.39□□□□□ -1.39
NEDD9-203ENST00000397378 FAM25CB3EWG5 89 aa6.39□□□□□ -1.39
NEDD9-203ENST00000397378 FAM25GB3EWG6 89 aa6.39□□□□□ -1.39
NEDD9-203ENST00000397378 H3BRN7 92 aa6.39□□□□□ -1.39
NEDD9-203ENST00000397378 AKR1C4P17516 323 aa6.39□□□□□ -1.39
NEDD9-203ENST00000397378 SSBP1Q04837 148 aaKnown RBP6.39□□□□□ -1.39
NEDD9-203ENST00000397378 DAZ2Q13117 558 aaKnown RBP6.39□□□□□ -1.39
NEDD9-203ENST00000397378 TMEM182Q6ZP80 229 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms