RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 TMEM189A5PLL7 270 aa11.74□□□□□ -0.53
CLTA-203ENST00000396603 C17orf112F2Z3M2 114 aa11.74□□□□□ -0.53
CLTA-203ENST00000396603 COX7A2P2O60397 106 aa11.74□□□□□ -0.53
CLTA-203ENST00000396603 GATA2P23769 480 aaPredicted RBP11.74□□□□□ -0.53
CLTA-203ENST00000396603 GALR1P47211 349 aa11.74□□□□□ -0.53
CLTA-203ENST00000396603 RPL29P47914 159 aaKnown RBP11.74□□□□□ -0.53
CLTA-203ENST00000396603 OR1L4Q8NGR5 311 aa11.74□□□□□ -0.53
CLTA-203ENST00000396603 CLUHP3Q96NS8 147 aa11.74□□□□□ -0.53
CLTA-203ENST00000396603 PFDN5Q99471 154 aa11.74□□□□□ -0.53
CLTA-203ENST00000396603 ARL6Q9H0F7 186 aa11.74□□□□□ -0.53
CLTA-203ENST00000396603 TEX48A0A1B0GUV7 120 aa11.73□□□□□ -0.53
CLTA-203ENST00000396603 SMIM9A6NGZ8 99 aa11.73□□□□□ -0.53
CLTA-203ENST00000396603 H3BMM0 161 aa11.73□□□□□ -0.53
CLTA-203ENST00000396603 HLA-DRB4P13762 266 aa11.73□□□□□ -0.53
CLTA-203ENST00000396603 KIAA1109Q2LD37 5005 aa11.73□□□□□ -0.53
CLTA-203ENST00000396603 C12orf74Q32Q52 190 aa11.73□□□□□ -0.53
CLTA-203ENST00000396603 SCGB1C1Q8TD33 95 aa11.73□□□□□ -0.53
CLTA-203ENST00000396603 FAM210BQ96KR6 192 aa11.73□□□□□ -0.53
CLTA-203ENST00000396603 AQP10Q96PS8 301 aa11.73□□□□□ -0.53
CLTA-203ENST00000396603 HLA-DRB4X5D2U9 266 aa11.73□□□□□ -0.53
CLTA-203ENST00000396603 DEFB131BA0A096LNP1 70 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 ZNF98A6NK75 572 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 RPL7P18124 248 aaKnown RBP11.72□□□□□ -0.53
CLTA-203ENST00000396603 MEOX2P50222 304 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 B2MP61769 119 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 ZNF266Q14584 549 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 OPCMLQ14982 345 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 SPATA31B1PQ5VZV4 182 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 ZNF705AQ6ZN79 300 aaPredicted RBP11.72□□□□□ -0.53
CLTA-203ENST00000396603 TMEM182Q6ZP80 229 aaPredicted RBP11.72□□□□□ -0.53
CLTA-203ENST00000396603 POM121L12Q8N7R1 296 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 SHANK2-AS3Q9BTD1 123 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 NDUFAF3Q9BU61 184 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 SLC25A39Q9BZJ4 359 aaPredicted RBP11.72□□□□□ -0.53
CLTA-203ENST00000396603 ARV1Q9H2C2 271 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 SLC25A22Q9H936 323 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 CLEC5AQ9NY25 188 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 DOK5Q9P104 306 aa11.72□□□□□ -0.53
CLTA-203ENST00000396603 FXYD6-FXYD2A0A087WZ82 144 aa11.71□□□□□ -0.53
CLTA-203ENST00000396603 ZNF705FA8MVS1 300 aaPredicted RBP11.71□□□□□ -0.53
CLTA-203ENST00000396603 H3BRN7 92 aa11.71□□□□□ -0.53
CLTA-203ENST00000396603 ZNF705DP0CH99 300 aaPredicted RBP11.71□□□□□ -0.53
CLTA-203ENST00000396603 ZNF705BP0CI00 300 aaPredicted RBP11.71□□□□□ -0.53
CLTA-203ENST00000396603 ID1P41134 155 aa11.71□□□□□ -0.53
CLTA-203ENST00000396603 C10orf113Q5VZT2 155 aa11.71□□□□□ -0.53
CLTA-203ENST00000396603 NPCDR1Q9BY65 106 aa11.71□□□□□ -0.53
CLTA-203ENST00000396603 PARD6GQ9BYG4 376 aaPredicted RBP11.71□□□□□ -0.53
CLTA-203ENST00000396603 WDR61Q9GZS3 305 aaKnown RBP11.71□□□□□ -0.53
CLTA-203ENST00000396603 DNAJC4Q9NNZ3 241 aa11.71□□□□□ -0.53
CLTA-203ENST00000396603 SLC39A9Q9NUM3 307 aa11.71□□□□□ -0.53
CLTA-203ENST00000396603 CELA1Q9UNI1 258 aa11.71□□□□□ -0.53
CLTA-203ENST00000396603 PXMP4Q9Y6I8 212 aa11.71□□□□□ -0.53
CLTA-203ENST00000396603 MIC13Q5XKP0 118 aa11.7□□□□□ -0.54
CLTA-203ENST00000396603 SMIM3Q9BZL3 60 aa11.7□□□□□ -0.54
CLTA-203ENST00000396603 SPART-AS1P0CW21 52 aa11.69□□□□□ -0.54
CLTA-203ENST00000396603 PSMB3P49720 205 aa11.69□□□□□ -0.54
CLTA-203ENST00000396603 FOXI2Q6ZQN5 318 aa11.69□□□□□ -0.54
CLTA-203ENST00000396603 LINC00305Q7Z4B0 112 aa11.69□□□□□ -0.54
CLTA-203ENST00000396603 SCRT1Q9BWW7 348 aa11.69□□□□□ -0.54
CLTA-203ENST00000396603 XCL2Q9UBD3 114 aa11.69□□□□□ -0.54
CLTA-203ENST00000396603 PCLOQ9Y6V0 5065 aa11.69□□□□□ -0.54
CLTA-203ENST00000396603 A0A1B0GVY2 172 aa11.68□□□□□ -0.54
CLTA-203ENST00000396603 LGALS9BQ3B8N2 356 aa11.68□□□□□ -0.54
CLTA-203ENST00000396603 SLC25A32Q9H2D1 315 aa11.68□□□□□ -0.54
CLTA-203ENST00000396603 SAV1Q9H4B6 383 aaPredicted RBP11.68□□□□□ -0.54
CLTA-203ENST00000396603 PKHD1P08F94 4074 aa11.68□□□□□ -0.54
CLTA-203ENST00000396603 AGRNO00468 2067 aa11.67□□□□□ -0.54
CLTA-203ENST00000396603 DNAH11Q96DT5 4516 aa11.67□□□□□ -0.54
CLTA-203ENST00000396603 Q5BKY6 102 aa11.67□□□□□ -0.54
CLTA-203ENST00000396603 Q6ZNX1 250 aa11.67□□□□□ -0.54
CLTA-203ENST00000396603 BPIFA4PQ86YQ2 179 aa11.67□□□□□ -0.54
CLTA-203ENST00000396603 UHRF2Q96PU4 802 aa11.67□□□□□ -0.54
CLTA-203ENST00000396603 TNFSF18Q9UNG2 199 aa11.67□□□□□ -0.54
CLTA-203ENST00000396603 RFNGQ9Y644 331 aa11.67□□□□□ -0.54
CLTA-203ENST00000396603 BORCS7-ASMTA0A0B4J1R7 106 aa11.66□□□□□ -0.54
CLTA-203ENST00000396603 ISLRO14498 428 aa11.66□□□□□ -0.54
CLTA-203ENST00000396603 MED14OSP0DP75 135 aa11.66□□□□□ -0.54
CLTA-203ENST00000396603 PATE2Q6UY27 113 aa11.66□□□□□ -0.54
CLTA-203ENST00000396603 TMEM37Q8WXS4 190 aa11.66□□□□□ -0.54
CLTA-203ENST00000396603 RSG1Q9BU20 258 aa11.66□□□□□ -0.54
CLTA-203ENST00000396603 DYNC1H1Q14204 4646 aaKnown RBP11.66□□□□□ -0.54
CLTA-203ENST00000396603 SOCS3O14543 225 aa11.65□□□□□ -0.54
CLTA-203ENST00000396603 TAAR5O14804 337 aa11.65□□□□□ -0.54
CLTA-203ENST00000396603 C16orf92Q96LL3 132 aa11.65□□□□□ -0.54
CLTA-203ENST00000396603 MRPL32Q9BYC8 188 aaKnown RBP11.65□□□□□ -0.54
CLTA-203ENST00000396603 TIMM9Q9Y5J7 89 aa11.65□□□□□ -0.54
CLTA-203ENST00000396603 A0A087X0K7 114 aa11.64□□□□□ -0.55
CLTA-203ENST00000396603 ARPC5O15511 151 aa11.64□□□□□ -0.55
CLTA-203ENST00000396603 CXCL2P19875 107 aa11.64□□□□□ -0.55
CLTA-203ENST00000396603 RNF212Q495C1 297 aa11.64□□□□□ -0.55
CLTA-203ENST00000396603 FFAR4Q5NUL3 377 aa11.64□□□□□ -0.55
CLTA-203ENST00000396603 LRRC20Q8TCA0 184 aa11.64□□□□□ -0.55
CLTA-203ENST00000396603 DKK2Q9UBU2 259 aa11.64□□□□□ -0.55
CLTA-203ENST00000396603 PKD1P98161 4303 aa11.64□□□□□ -0.55
CLTA-203ENST00000396603 RNF222A6NCQ9 220 aa11.63□□□□□ -0.55
CLTA-203ENST00000396603 PRSS29PA6NIE9 313 aa11.63□□□□□ -0.55
CLTA-203ENST00000396603 HMSDA8MTL9 139 aa11.63□□□□□ -0.55
CLTA-203ENST00000396603 ZNF345Q14585 488 aa11.63□□□□□ -0.55
CLTA-203ENST00000396603 GUK1Q16774 197 aa11.63□□□□□ -0.55
CLTA-203ENST00000396603 ACOT6Q3I5F7 207 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms