RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 IGHV4-39P01824 125 aa15.18■□□□□ 0.02
CCDC50-202ENST00000392456 FCGR2BP31994 310 aaPredicted RBP15.18■□□□□ 0.02
CCDC50-202ENST00000392456 SLC25A48Q6ZT89 311 aaKnown RBP15.18■□□□□ 0.02
CCDC50-202ENST00000392456 SH2D6Q7Z4S9 175 aa15.18■□□□□ 0.02
CCDC50-202ENST00000392456 OR9G9P0C7N8 305 aa15.17■□□□□ 0.02
CCDC50-202ENST00000392456 PRR31Q5SQ13 230 aa15.17■□□□□ 0.02
CCDC50-202ENST00000392456 SIGLEC8Q9NYZ4 499 aa15.17■□□□□ 0.02
CCDC50-202ENST00000392456 RABAC1Q9UI14 185 aa15.17■□□□□ 0.02
CCDC50-202ENST00000392456 FGF6P10767 208 aa15.17■□□□□ 0.02
CCDC50-202ENST00000392456 G6PCP35575 357 aa15.17■□□□□ 0.02
CCDC50-202ENST00000392456 URB1-AS1Q96HZ7 61 aa15.17■□□□□ 0.02
CCDC50-202ENST00000392456 TM2D2Q9BX73 214 aa15.17■□□□□ 0.02
CCDC50-202ENST00000392456 RAB9BQ9NP90 201 aa15.17■□□□□ 0.02
CCDC50-202ENST00000392456 VPREB3Q9UKI3 123 aa15.17■□□□□ 0.02
CCDC50-202ENST00000392456 CELSR1Q9NYQ6 3014 aa15.16■□□□□ 0.02
CCDC50-202ENST00000392456 DIAPH2-AS1Q14236 149 aa15.16■□□□□ 0.02
CCDC50-202ENST00000392456 ETDBQ3ZM63 59 aa15.16■□□□□ 0.02
CCDC50-202ENST00000392456 HSD17B10Q99714 261 aaKnown RBP15.16■□□□□ 0.02
CCDC50-202ENST00000392456 C20orf78Q9BR46 151 aa15.16■□□□□ 0.02
CCDC50-202ENST00000392456 C9JCJ5 164 aa15.16■□□□□ 0.02
CCDC50-202ENST00000392456 IGHV1-8P0DP01 117 aa15.16■□□□□ 0.02
CCDC50-202ENST00000392456 INSL3P51460 131 aa15.16■□□□□ 0.02
CCDC50-202ENST00000392456 SPANXN5Q5MJ07 72 aa15.16■□□□□ 0.02
CCDC50-202ENST00000392456 M0QXV9 152 aa15.15■□□□□ 0.02
CCDC50-202ENST00000392456 FCGR3BO75015 233 aa15.15■□□□□ 0.02
CCDC50-202ENST00000392456 CATR1Q13166 79 aa15.15■□□□□ 0.02
CCDC50-202ENST00000392456 CCL19Q99731 98 aa15.15■□□□□ 0.02
CCDC50-202ENST00000392456 SH2D7A6NKC9 451 aaPredicted RBP15.15■□□□□ 0.02
CCDC50-202ENST00000392456 BPESC1Q9GZL8 116 aa15.15■□□□□ 0.02
CCDC50-202ENST00000392456 A0A087WX48 190 aa15.14■□□□□ 0.01
CCDC50-202ENST00000392456 ZFP36P26651 326 aaKnown RBP15.14■□□□□ 0.01
CCDC50-202ENST00000392456 VDAC2P45880 294 aaPredicted RBP15.14■□□□□ 0.01
CCDC50-202ENST00000392456 KLRD1Q13241 179 aa15.14■□□□□ 0.01
CCDC50-202ENST00000392456 OR4A16Q8NH70 328 aa15.14■□□□□ 0.01
CCDC50-202ENST00000392456 ARPC1AQ92747 370 aa15.14■□□□□ 0.01
CCDC50-202ENST00000392456 TCL1AP56279 114 aa15.14■□□□□ 0.01
CCDC50-202ENST00000392456 VKORC1L1Q8N0U8 176 aa15.14■□□□□ 0.01
CCDC50-202ENST00000392456 PDLIM3Q53GG5 364 aaPredicted RBP15.13■□□□□ 0.01
CCDC50-202ENST00000392456 Q6ZUT4 128 aa15.13■□□□□ 0.01
CCDC50-202ENST00000392456 ANKRD17O75179 2603 aaKnown RBP15.13■□□□□ 0.01
CCDC50-202ENST00000392456 A0A1W2PRD5 423 aa15.12■□□□□ 0.01
CCDC50-202ENST00000392456 A0A1W2PRF3 423 aa15.12■□□□□ 0.01
CCDC50-202ENST00000392456 A0A1W2PRM7 423 aa15.12■□□□□ 0.01
CCDC50-202ENST00000392456 NHLRC4P0CG21 123 aaPredicted RBP15.12■□□□□ 0.01
CCDC50-202ENST00000392456 CT45A6P0DMU7 189 aa15.12■□□□□ 0.01
CCDC50-202ENST00000392456 CT45A5P0DMU8 189 aa15.12■□□□□ 0.01
CCDC50-202ENST00000392456 CT45A7P0DMV0 189 aa15.12■□□□□ 0.01
CCDC50-202ENST00000392456 MGST1P10620 155 aaKnown RBP15.12■□□□□ 0.01
CCDC50-202ENST00000392456 ABHD12Q8N2K0 398 aa15.12■□□□□ 0.01
CCDC50-202ENST00000392456 C18orf15Q96N68 181 aa15.12■□□□□ 0.01
CCDC50-202ENST00000392456 ZFHX3Q15911 3703 aa15.12■□□□□ 0.01
CCDC50-202ENST00000392456 P0C879 139 aa15.12■□□□□ 0.01
CCDC50-202ENST00000392456 RPL8P62917 257 aaKnown RBP15.12■□□□□ 0.01
CCDC50-202ENST00000392456 LCNL1Q6ZST4 164 aa15.12■□□□□ 0.01
CCDC50-202ENST00000392456 LY6G5BQ8NDX9 201 aa15.12■□□□□ 0.01
CCDC50-202ENST00000392456 C8orf46Q8TAG6 207 aa15.12■□□□□ 0.01
CCDC50-202ENST00000392456 SSBP3Q9BWW4 388 aaPredicted RBP15.12■□□□□ 0.01
CCDC50-202ENST00000392456 A4D1N5 150 aa15.11■□□□□ 0.01
CCDC50-202ENST00000392456 LEPROTL1O95214 131 aa15.11■□□□□ 0.01
CCDC50-202ENST00000392456 XGP55808 180 aa15.11■□□□□ 0.01
CCDC50-202ENST00000392456 TMEM30BQ3MIR4 351 aa15.11■□□□□ 0.01
CCDC50-202ENST00000392456 TMEM14EPQ6UXP3 125 aa15.11■□□□□ 0.01
CCDC50-202ENST00000392456 WIPF2Q8TF74 440 aaPredicted RBP15.11■□□□□ 0.01
CCDC50-202ENST00000392456 TMEM147Q9BVK8 224 aa15.11■□□□□ 0.01
CCDC50-202ENST00000392456 TMEM133Q9H2Q1 129 aa15.11■□□□□ 0.01
CCDC50-202ENST00000392456 COX6B1P14854 86 aa15.11■□□□□ 0.01
CCDC50-202ENST00000392456 VWC2Q2TAL6 325 aa15.11■□□□□ 0.01
CCDC50-202ENST00000392456 C5orf47Q569G3 176 aa15.11■□□□□ 0.01
CCDC50-202ENST00000392456 Q8N7P7 452 aa15.11■□□□□ 0.01
CCDC50-202ENST00000392456 OSR1Q8TAX0 266 aaPredicted RBP15.11■□□□□ 0.01
CCDC50-202ENST00000392456 ONECUT1Q9UBC0 465 aa15.11■□□□□ 0.01
CCDC50-202ENST00000392456 NAV2Q8IVL1 2488 aa15.11■□□□□ 0.01
CCDC50-202ENST00000392456 IGHV1-24A0A0C4DH33 117 aa15.1■□□□□ 0.01
CCDC50-202ENST00000392456 SMIM27A0A1W2PRY6 76 aa15.1■□□□□ 0.01
CCDC50-202ENST00000392456 TEPPQ6URK8 271 aa15.1■□□□□ 0.01
CCDC50-202ENST00000392456 SYT8Q8NBV8 401 aa15.1■□□□□ 0.01
CCDC50-202ENST00000392456 S1PR3Q99500 378 aa15.1■□□□□ 0.01
CCDC50-202ENST00000392456 NPCDR1Q9BY65 106 aa15.1■□□□□ 0.01
CCDC50-202ENST00000392456 ZNF331Q9NQX6 463 aaPredicted RBP15.1■□□□□ 0.01
CCDC50-202ENST00000392456 OSTCQ9NRP0 149 aa15.1■□□□□ 0.01
CCDC50-202ENST00000392456 APCP25054 2843 aa15.1■□□□□ 0.01
CCDC50-202ENST00000392456 TNCP24821 2201 aa15.1■□□□□ 0.01
CCDC50-202ENST00000392456 IGKV1-16P04430 117 aa15.1■□□□□ 0.01
CCDC50-202ENST00000392456 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.1■□□□□ 0.01
CCDC50-202ENST00000392456 GTSF1Q8WW33 167 aa15.1■□□□□ 0.01
CCDC50-202ENST00000392456 MCRIP2Q9BUT9 160 aaKnown RBP15.1■□□□□ 0.01
CCDC50-202ENST00000392456 MRPL20Q9BYC9 149 aaKnown RBP15.1■□□□□ 0.01
CCDC50-202ENST00000392456 ABCA2Q9BZC7 2435 aa15.09■□□□□ 0.01
CCDC50-202ENST00000392456 IZUMO1RA6ND01 250 aa15.09■□□□□ 0.01
CCDC50-202ENST00000392456 FAM162BQ5T6X4 162 aa15.09■□□□□ 0.01
CCDC50-202ENST00000392456 C11orf52Q96A22 123 aa15.09■□□□□ 0.01
CCDC50-202ENST00000392456 PPDPFQ9H3Y8 114 aa15.09■□□□□ 0.01
CCDC50-202ENST00000392456 SMIM13P0DJ93 91 aa15.09■□□□□ 0.01
CCDC50-202ENST00000392456 COX7A1P24310 79 aa15.09■□□□□ 0.01
CCDC50-202ENST00000392456 KRTAP10-9P60411 292 aa15.09■□□□□ 0.01
CCDC50-202ENST00000392456 LINC01545Q5VT33 79 aa15.09■□□□□ 0.01
CCDC50-202ENST00000392456 RASL11AQ6T310 242 aa15.09■□□□□ 0.01
CCDC50-202ENST00000392456 ZNF833PQ6ZTB9 187 aa15.09■□□□□ 0.01
CCDC50-202ENST00000392456 SRSF8Q9BRL6 282 aaKnown RBP15.09■□□□□ 0.01
CCDC50-202ENST00000392456 OR2J3O76001 311 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms