RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 PYGO2Q9BRQ0 406 aa9.44□□□□□ -0.9
SPTBN1-203ENST00000389980 PAXXQ9BUH6 204 aa9.44□□□□□ -0.9
SPTBN1-203ENST00000389980 NSD1Q96L73 2696 aaPredicted RBP9.44□□□□□ -0.9
SPTBN1-203ENST00000389980 TRBV7-1A0A0A6YYK4 115 aa9.44□□□□□ -0.9
SPTBN1-203ENST00000389980 H3BTX0 84 aa9.44□□□□□ -0.9
SPTBN1-203ENST00000389980 AMBPP02760 352 aa9.44□□□□□ -0.9
SPTBN1-203ENST00000389980 HNF1AP20823 631 aa9.44□□□□□ -0.9
SPTBN1-203ENST00000389980 RAB9AP51151 201 aa9.44□□□□□ -0.9
SPTBN1-203ENST00000389980 TMEM241Q24JQ0 296 aa9.44□□□□□ -0.9
SPTBN1-203ENST00000389980 TMEM18Q96B42 140 aa9.44□□□□□ -0.9
SPTBN1-203ENST00000389980 AURKAIP1Q9NWT8 199 aaPredicted RBP9.44□□□□□ -0.9
SPTBN1-203ENST00000389980 FAM181BA6NEQ2 426 aa9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 FXYD5Q96DB9 178 aa9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 OR5B12Q96R08 314 aa9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 DERL1Q9BUN8 251 aa9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 TMEM167BQ9NRX6 74 aa9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 NAT8Q9UHE5 227 aa9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 H3BUA1 57 aa9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 ZNF25P17030 456 aaPredicted RBP9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 RPL23P62829 140 aaKnown RBP9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 PDZD11Q5EBL8 140 aa9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 C1orf194Q5T5A4 169 aa9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 TOMM20LQ6UXN7 152 aa9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 BLNKQ8WV28 456 aa9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 SNHG12Q9BXW3 62 aa9.43□□□□□ -0.9
SPTBN1-203ENST00000389980 TMEM250H0YL14 139 aa9.42□□□□□ -0.9
SPTBN1-203ENST00000389980 H3BRN7 92 aa9.42□□□□□ -0.9
SPTBN1-203ENST00000389980 NDUFB4O95168 129 aa9.42□□□□□ -0.9
SPTBN1-203ENST00000389980 GP9P14770 177 aa9.42□□□□□ -0.9
SPTBN1-203ENST00000389980 BTF3L4Q96K17 158 aa9.42□□□□□ -0.9
SPTBN1-203ENST00000389980 SCO2A0A1W2PP80 73 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 PGPEP1LA6NFU8 196 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 GGTLC3B5MD39 225 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 EREGO14944 169 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 SCGB2A1O75556 95 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 IGHG4P01861 327 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 RPLP1P05386 114 aaKnown RBP9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 PSMB8P28062 276 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 OR4X2Q8NGF9 303 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 USMG5Q96IX5 58 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 SHANK2-AS3Q9BTD1 123 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 ZFAND3Q9H8U3 227 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 ZNF207O43670 478 aaKnown RBP9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 BRI3O95415 125 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 ARL3P36405 182 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 TMEM86BQ8N661 226 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 TMEM208Q9BTX3 173 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 SERTAD4Q9NUC0 356 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 ZNF580Q9UK33 172 aa9.41□□□□□ -0.9
SPTBN1-203ENST00000389980 KIR2DL5BA0A0G2JN68 375 aa9.4□□□□□ -0.9
SPTBN1-203ENST00000389980 KIR2DL5BA0A0G2JPC4 375 aa9.4□□□□□ -0.9
SPTBN1-203ENST00000389980 SRD5A1P18405 259 aa9.4□□□□□ -0.9
SPTBN1-203ENST00000389980 RANP62826 216 aaKnown RBP9.4□□□□□ -0.9
SPTBN1-203ENST00000389980 SUMO1P63165 101 aaKnown RBP9.4□□□□□ -0.9
SPTBN1-203ENST00000389980 KIR2DL5AQ8N109 375 aa9.4□□□□□ -0.9
SPTBN1-203ENST00000389980 IGHV3OR16-13A0A075B7E8 117 aa9.4□□□□□ -0.91
SPTBN1-203ENST00000389980 IGHV3-74A0A0B4J1X5 117 aa9.4□□□□□ -0.91
SPTBN1-203ENST00000389980 PDE6DO43924 150 aa9.4□□□□□ -0.91
SPTBN1-203ENST00000389980 NBEAP1P0C6P0 100 aa9.4□□□□□ -0.91
SPTBN1-203ENST00000389980 FAM3BP58499 235 aaPredicted RBP9.4□□□□□ -0.91
SPTBN1-203ENST00000389980 RPL15P61313 204 aaKnown RBP9.4□□□□□ -0.91
SPTBN1-203ENST00000389980 C17orf77Q96MU5 243 aa9.4□□□□□ -0.91
SPTBN1-203ENST00000389980 IMMP2LQ96T52 175 aa9.4□□□□□ -0.91
SPTBN1-203ENST00000389980 RABAC1Q9UI14 185 aa9.4□□□□□ -0.91
SPTBN1-203ENST00000389980 FN1P02751 2386 aaKnown RBP9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 IGHV3-49A0A0A0MS15 119 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 IGHV3-66A0A0C4DH42 116 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 A0A0G2JLM5 398 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 CLPSL1A2RUU4 121 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 ZNF705GA8MUZ8 300 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 G0S2P27469 103 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 HIST2H2BDQ6DRA6 164 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 Q6ZSV7 163 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 Q8N2B8 174 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 STXBP6Q8NFX7 210 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 ZNF586Q9NXT0 402 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 NIPBLQ6KC79 2804 aaeCLIP9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 A0A1W2PRE2 83 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 BMPR1BO00238 502 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 CRYBB3P26998 211 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 SLC35B1P78383 322 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 TEX38Q6PEX7 206 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 ELOVL1Q9BW60 279 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 TMEM160Q9NX00 188 aa9.39□□□□□ -0.91
SPTBN1-203ENST00000389980 XKRY2A2RUG3 117 aa9.38□□□□□ -0.91
SPTBN1-203ENST00000389980 INAFM1C9JVW0 142 aa9.38□□□□□ -0.91
SPTBN1-203ENST00000389980 F6UZH7 168 aa9.38□□□□□ -0.91
SPTBN1-203ENST00000389980 APOHP02749 345 aaPredicted RBP9.38□□□□□ -0.91
SPTBN1-203ENST00000389980 PRB4P10163 310 aaPredicted RBP9.38□□□□□ -0.91
SPTBN1-203ENST00000389980 CD99P14209 185 aa9.38□□□□□ -0.91
SPTBN1-203ENST00000389980 COTL1Q14019 142 aa9.38□□□□□ -0.91
SPTBN1-203ENST00000389980 SAPCD1Q5SSQ6 148 aa9.38□□□□□ -0.91
SPTBN1-203ENST00000389980 UNQ9165/PRO28630Q6UXU0 137 aa9.38□□□□□ -0.91
SPTBN1-203ENST00000389980 BPIFA4PQ86YQ2 179 aa9.38□□□□□ -0.91
SPTBN1-203ENST00000389980 TXNDC17Q9BRA2 123 aa9.38□□□□□ -0.91
SPTBN1-203ENST00000389980 F8P00451 2351 aa9.38□□□□□ -0.91
SPTBN1-203ENST00000389980 MRPS12O15235 138 aaKnown RBP9.37□□□□□ -0.91
SPTBN1-203ENST00000389980 PFN1P07737 140 aaKnown RBP9.37□□□□□ -0.91
SPTBN1-203ENST00000389980 ATG101Q9BSB4 218 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms