RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TRAV8-2A0A0B4J237 113 aa11.91□□□□□ -0.5
SNRPB-201ENST00000381342 H3BQ15 152 aa11.91□□□□□ -0.5
SNRPB-201ENST00000381342 SLC17A3O00476 420 aa11.91□□□□□ -0.5
SNRPB-201ENST00000381342 PYYP10082 97 aa11.91□□□□□ -0.5
SNRPB-201ENST00000381342 CXCL2P19875 107 aa11.91□□□□□ -0.5
SNRPB-201ENST00000381342 HLA-DMBP28068 263 aa11.91□□□□□ -0.5
SNRPB-201ENST00000381342 RAB2AP61019 212 aa11.91□□□□□ -0.5
SNRPB-201ENST00000381342 STHQ8IWL8 128 aa11.91□□□□□ -0.5
SNRPB-201ENST00000381342 TENM3Q9P273 2699 aa11.9□□□□□ -0.5
SNRPB-201ENST00000381342 A0A0D9SG52 128 aa11.9□□□□□ -0.5
SNRPB-201ENST00000381342 TAAR5O14804 337 aa11.9□□□□□ -0.5
SNRPB-201ENST00000381342 EIF3GO75821 320 aaKnown RBP eCLIP11.9□□□□□ -0.51e-9■■■□□ 16.4
SNRPB-201ENST00000381342 APOC4P55056 127 aa11.9□□□□□ -0.5
SNRPB-201ENST00000381342 ACOT6Q3I5F7 207 aaPredicted RBP11.9□□□□□ -0.5
SNRPB-201ENST00000381342 LGALSLQ3ZCW2 172 aaPredicted RBP11.9□□□□□ -0.5
SNRPB-201ENST00000381342 GDF5OSQ5U4N7 250 aa11.9□□□□□ -0.5
SNRPB-201ENST00000381342 LCN15Q6UWW0 184 aa11.9□□□□□ -0.5
SNRPB-201ENST00000381342 OR2G3Q8NGZ4 309 aa11.9□□□□□ -0.5
SNRPB-201ENST00000381342 LRRC20Q8TCA0 184 aa11.9□□□□□ -0.5
SNRPB-201ENST00000381342 FAM167A-AS1Q96KT0 104 aa11.9□□□□□ -0.5
SNRPB-201ENST00000381342 PSMG3Q9BT73 122 aaPredicted RBP11.9□□□□□ -0.5
SNRPB-201ENST00000381342 CYTL1Q9NRR1 136 aa11.9□□□□□ -0.5
SNRPB-201ENST00000381342 F6UB75 175 aa11.89□□□□□ -0.51
SNRPB-201ENST00000381342 M6PRP20645 277 aa11.89□□□□□ -0.51
SNRPB-201ENST00000381342 C4BPBP20851 252 aa11.89□□□□□ -0.51
SNRPB-201ENST00000381342 RHOBP62745 196 aa11.89□□□□□ -0.51
SNRPB-201ENST00000381342 TRPT1Q86TN4 253 aaKnown RBP11.89□□□□□ -0.51
SNRPB-201ENST00000381342 ARPC5LQ9BPX5 153 aa11.89□□□□□ -0.51
SNRPB-201ENST00000381342 HRH4Q9H3N8 390 aa11.89□□□□□ -0.51
SNRPB-201ENST00000381342 RPRMQ9NS64 109 aa11.89□□□□□ -0.51
SNRPB-201ENST00000381342 ZNF586Q9NXT0 402 aa11.89□□□□□ -0.51
SNRPB-201ENST00000381342 TMEM14CQ9P0S9 112 aa11.89□□□□□ -0.51
SNRPB-201ENST00000381342 BCL2L11O43521 198 aa11.88□□□□□ -0.51
SNRPB-201ENST00000381342 JTBO76095 146 aa11.88□□□□□ -0.51
SNRPB-201ENST00000381342 PRB4P10163 310 aaPredicted RBP11.88□□□□□ -0.51
SNRPB-201ENST00000381342 FAM122CQ6P4D5 195 aa11.88□□□□□ -0.51
SNRPB-201ENST00000381342 ZNF738Q8NE65 137 aa11.88□□□□□ -0.51
SNRPB-201ENST00000381342 GNPNAT1Q96EK6 184 aaPredicted RBP11.88□□□□□ -0.51
SNRPB-201ENST00000381342 SLC50A1Q9BRV3 221 aa11.88□□□□□ -0.51
SNRPB-201ENST00000381342 ZNF331Q9NQX6 463 aaPredicted RBP11.88□□□□□ -0.51
SNRPB-201ENST00000381342 NBEAL2Q6ZNJ1 2754 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 KIR2DL5BA0A0G2JN68 375 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 KIR2DL5BA0A0G2JPC4 375 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 OR7C2O60412 319 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 OR10J4P0C629 311 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 HLA-DRB4P13762 266 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 GUK1Q16774 197 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 DEFB135Q30KP9 77 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 KHDC3LQ587J8 217 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 FOXI2Q6ZQN5 318 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 TMUB2Q71RG4 321 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 KIR2DL5AQ8N109 375 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 OR10G4Q8NGN3 311 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 OR10G9Q8NGN4 311 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 OR10G7Q8NGN6 311 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 KIR2DL5BQ8NHK3 375 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 SAT2Q96F10 170 aaPredicted RBP11.87□□□□□ -0.51
SNRPB-201ENST00000381342 PAXXQ9BUH6 204 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 SAV1Q9H4B6 383 aaPredicted RBP11.87□□□□□ -0.51
SNRPB-201ENST00000381342 HLA-DRB4X5D2U9 266 aa11.87□□□□□ -0.51
SNRPB-201ENST00000381342 TRBV19A0A075B6N1 114 aa11.86□□□□□ -0.51
SNRPB-201ENST00000381342 KANTRA0A1W2PQU2 76 aa11.86□□□□□ -0.51
SNRPB-201ENST00000381342 H3BMM0 161 aa11.86□□□□□ -0.51
SNRPB-201ENST00000381342 CA1P00915 261 aaPredicted RBP11.86□□□□□ -0.51
SNRPB-201ENST00000381342 IGKV3-20P01619 116 aa11.86□□□□□ -0.51
SNRPB-201ENST00000381342 HIST1H1EP10412 219 aaKnown RBP11.86□□□□□ -0.51
SNRPB-201ENST00000381342 SERF2P84101 59 aa11.86□□□□□ -0.51
SNRPB-201ENST00000381342 IL17DQ8TAD2 202 aa11.86□□□□□ -0.51
SNRPB-201ENST00000381342 BLNKQ8WV28 456 aa11.86□□□□□ -0.51
SNRPB-201ENST00000381342 ZNF503Q96F45 646 aa11.86□□□□□ -0.51
SNRPB-201ENST00000381342 OR51M1Q9H341 326 aa11.86□□□□□ -0.51
SNRPB-201ENST00000381342 A0A0J9YX75 114 aa11.85□□□□□ -0.51
SNRPB-201ENST00000381342 A0A1W2PPV4 95 aa11.85□□□□□ -0.51
SNRPB-201ENST00000381342 HMGB3O15347 200 aaKnown RBP11.85□□□□□ -0.51
SNRPB-201ENST00000381342 NDUFB4O95168 129 aa11.85□□□□□ -0.51
SNRPB-201ENST00000381342 CDC34P49427 236 aaPredicted RBP11.85□□□□□ -0.51
SNRPB-201ENST00000381342 TAS2R45P59539 299 aa11.85□□□□□ -0.51
SNRPB-201ENST00000381342 UBE2L3P68036 154 aaKnown RBP11.85□□□□□ -0.51
SNRPB-201ENST00000381342 PSG3Q16557 428 aa11.85□□□□□ -0.51
SNRPB-201ENST00000381342 TMEM41BQ5BJD5 291 aa11.85□□□□□ -0.51
SNRPB-201ENST00000381342 CASC10Q5T4H9 136 aa11.85□□□□□ -0.51
SNRPB-201ENST00000381342 EBLN2Q6P2I7 272 aa11.85□□□□□ -0.51
SNRPB-201ENST00000381342 RPP25LQ8N5L8 163 aaKnown RBP11.85□□□□□ -0.51
SNRPB-201ENST00000381342 FXYD5Q96DB9 178 aa11.85□□□□□ -0.51
SNRPB-201ENST00000381342 ZNF471Q9BX82 626 aaPredicted RBP11.85□□□□□ -0.51
SNRPB-201ENST00000381342 CSTL1Q9H114 145 aa11.85□□□□□ -0.51
SNRPB-201ENST00000381342 UBE2CO00762 179 aa11.84□□□□□ -0.51
SNRPB-201ENST00000381342 ZNF253O75346 499 aa11.84□□□□□ -0.51
SNRPB-201ENST00000381342 ZNF705DP0CH99 300 aaPredicted RBP11.84□□□□□ -0.51
SNRPB-201ENST00000381342 ZNF705BP0CI00 300 aaPredicted RBP11.84□□□□□ -0.51
SNRPB-201ENST00000381342 SPP1P10451 314 aa11.84□□□□□ -0.51
SNRPB-201ENST00000381342 OR4B1Q8NGF8 309 aa11.84□□□□□ -0.51
SNRPB-201ENST00000381342 RNF141Q8WVD5 230 aa11.84□□□□□ -0.51
SNRPB-201ENST00000381342 PHYHIPLQ96FC7 376 aa11.84□□□□□ -0.51
SNRPB-201ENST00000381342 EDA2RQ9HAV5 297 aa11.84□□□□□ -0.51
SNRPB-201ENST00000381342 ZNF705FA8MVS1 300 aaPredicted RBP11.83□□□□□ -0.52
SNRPB-201ENST00000381342 MBP02144 154 aa11.83□□□□□ -0.52
SNRPB-201ENST00000381342 GIG44P09565 113 aaPredicted RBP11.83□□□□□ -0.52
SNRPB-201ENST00000381342 NBEAP1P0C6P0 100 aa11.83□□□□□ -0.52
SNRPB-201ENST00000381342 PDE6HQ13956 83 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms