RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 OR13C6PQ8NH95 151 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 COPS9Q8WXC6 57 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 SLC25A2Q9BXI2 301 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 CSTL1Q9H114 145 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 TNFRSF18Q9Y5U5 241 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 TRBV6-6A0A0A6YYG2 114 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 A8MWV9 139 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 K7EN84 100 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 ARMS2P0C7Q2 107 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 IL15RAQ13261 267 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 TMEM158Q8WZ71 300 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 DDB2Q92466 427 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 RAX2Q96IS3 184 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 TMEM14BQ9NUH8 114 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 SMIM27A0A1W2PRY6 76 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 SMG1Q96Q15 3661 aaKnown RBP3.42□□□□□ -1.86
BRCA2-201ENST00000380152 NPFFO15130 113 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 NBR2O15453 112 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 KLF17Q5JT82 389 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-201ENST00000380152 ANAPC10Q9UM13 185 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 B9A039 149 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-201ENST00000380152 CSRP1P21291 193 aaKnown RBP3.42□□□□□ -1.86
BRCA2-201ENST00000380152 CD300EQ496F6 205 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-201ENST00000380152 ORMDL2Q53FV1 153 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 PSMG4Q5JS54 123 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 PLA2G2EQ9NZK7 142 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 GGTLC3B5MD39 225 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 CLEC2AQ6UVW9 174 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 ZNF329Q86UD4 541 aa3.42□□□□□ -1.86
BRCA2-201ENST00000380152 IGHV2-26A0A0B4J1V2 119 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 LYNX1G3V0Z9 82 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 PPBPP02775 128 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 SPINK8P0C7L1 97 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 LYNX1P0DP58 116 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 Q0VFX4 171 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 ACACAQ13085 2346 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 LTBP2Q14767 1821 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 IGKV1D-17A0A075B6S4 117 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 C9orf172C9J069 976 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 H0YJW9 148 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 TRGV3P03979 118 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 CEACAM8P31997 349 aaPredicted RBP3.41□□□□□ -1.86
BRCA2-201ENST00000380152 NDPQ00604 133 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 RRN3P1Q2M238 152 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 A0A0U1RRA0 63 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 ZNF503-AS2A6NEH8 195 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 CSMD2Q7Z408 3487 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 LINC01560Q8TB33 94 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 LY96Q9Y6Y9 160 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 MALRD1Q5VYJ5 2156 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 Q8TAT8 98 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 NOTCH3Q9UM47 2321 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 SMAD7O15105 426 aaKnown RBP3.41□□□□□ -1.86
BRCA2-201ENST00000380152 VDAC2P45880 294 aaPredicted RBP3.41□□□□□ -1.86
BRCA2-201ENST00000380152 SRSF6Q13247 344 aaKnown RBP3.41□□□□□ -1.86
BRCA2-201ENST00000380152 C17orf82Q86X59 251 aaPredicted RBP3.41□□□□□ -1.86
BRCA2-201ENST00000380152 RNF182Q8N6D2 247 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 H3BRM9 83 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 NUPR1O60356 82 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 IGKV1-39P01597 117 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 IGKV1D-39P04432 117 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 C1orf122Q6ZSJ8 110 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 SIGLEC15Q6ZMC9 328 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 RAI1Q7Z5J4 1906 aaPredicted RBP3.41□□□□□ -1.86
BRCA2-201ENST00000380152 PDLIM4P50479 330 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 GAGE2BQ13066 116 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 GAGE2EQ4V326 116 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 ADAMTSL5Q6ZMM2 481 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 GAGE2DQ9UEU5 116 aa3.41□□□□□ -1.86
BRCA2-201ENST00000380152 COLQQ9Y215 455 aaPredicted RBP3.41□□□□□ -1.86
BRCA2-201ENST00000380152 TRAV8-4A0A0B4J246 113 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 HAX1O00165 279 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 TIMM23O14925 209 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 AZU1P20160 251 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 C19orf54Q5BKX5 351 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 TMEM105Q8N8V8 129 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 ABHD17AQ96GS6 310 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 TRAV21A0A0B4J279 112 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 A0A1W2PPM0 123 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 FNDC10F2Z333 226 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 BVES-AS1Q5T3Y7 98 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 ZNF562Q6V9R5 426 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 TOMM7Q9P0U1 55 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 SH2D1AO60880 128 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 COX8AP10176 69 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 YPEL3P61236 119 aaPredicted RBP3.4□□□□□ -1.86
BRCA2-201ENST00000380152 FAM106AQ4KMX7 169 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 PAPPA-AS1Q5QFB9 102 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 ZC2HC1BQ5TFG8 222 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 FAM168AQ92567 244 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 DLX4Q92988 240 aaPredicted RBP3.4□□□□□ -1.86
BRCA2-201ENST00000380152 ERG28Q9UKR5 140 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 C9orf118A6NHY6 69 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 B3GALT5-AS1P59052 145 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 PVRIGQ6DKI7 326 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 COLCA1Q6ZS62 124 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 RNF166Q96A37 237 aaPredicted RBP3.4□□□□□ -1.86
BRCA2-201ENST00000380152 GFRA4Q9GZZ7 299 aa3.4□□□□□ -1.86
BRCA2-201ENST00000380152 BUB1B-PAK6H3BSN5 160 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms