RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 C5orf17Q8NAS9 161 aa18.73■□□□□ 0.59
ECHDC3-201ENST00000379215 HIST1H2BAQ96A08 127 aa18.73■□□□□ 0.59
ECHDC3-201ENST00000379215 NIPSNAP3BQ9BS92 247 aa18.73■□□□□ 0.59
ECHDC3-201ENST00000379215 RHPN1-AS1Q9BWJ2 59 aa18.73■□□□□ 0.59
ECHDC3-201ENST00000379215 AAMDCQ9H7C9 122 aa18.73■□□□□ 0.59
ECHDC3-201ENST00000379215 IGHV3-49A0A0A0MS15 119 aa18.72■□□□□ 0.59
ECHDC3-201ENST00000379215 IGHV3-66A0A0C4DH42 116 aa18.72■□□□□ 0.59
ECHDC3-201ENST00000379215 TMEM213A2RRL7 107 aa18.72■□□□□ 0.59
ECHDC3-201ENST00000379215 IGHV3OR16-13A0A075B7E8 117 aa18.71■□□□□ 0.59
ECHDC3-201ENST00000379215 IGHV3-74A0A0B4J1X5 117 aa18.71■□□□□ 0.59
ECHDC3-201ENST00000379215 PGPA6NDG6 321 aa18.71■□□□□ 0.59
ECHDC3-201ENST00000379215 M0QZ24 198 aa18.71■□□□□ 0.59
ECHDC3-201ENST00000379215 NDUFB4O95168 129 aa18.71■□□□□ 0.59
ECHDC3-201ENST00000379215 SNRPCP09234 159 aaKnown RBP18.71■□□□□ 0.59
ECHDC3-201ENST00000379215 SRSF2Q01130 221 aaKnown RBP18.71■□□□□ 0.59
ECHDC3-201ENST00000379215 SLC50A1Q9BRV3 221 aa18.71■□□□□ 0.59
ECHDC3-201ENST00000379215 PARLQ9H300 379 aa18.71■□□□□ 0.59
ECHDC3-201ENST00000379215 SMAD5-AS1Q9Y6J3 95 aa18.71■□□□□ 0.59
ECHDC3-201ENST00000379215 SCO2A0A1W2PP80 73 aa18.71■□□□□ 0.58
ECHDC3-201ENST00000379215 ZNF727A8MUV8 499 aa18.71■□□□□ 0.58
ECHDC3-201ENST00000379215 CHEK1O14757 476 aa18.71■□□□□ 0.58
ECHDC3-201ENST00000379215 FHL3Q13643 280 aa18.71■□□□□ 0.58
ECHDC3-201ENST00000379215 CMTM2Q8TAZ6 248 aa18.71■□□□□ 0.58
ECHDC3-201ENST00000379215 SMIM7Q9BQ49 75 aa18.71■□□□□ 0.58
ECHDC3-201ENST00000379215 NF1P21359 2839 aa18.7■□□□□ 0.58
ECHDC3-201ENST00000379215 H3BTX0 84 aa18.7■□□□□ 0.58
ECHDC3-201ENST00000379215 SLC25A5P05141 298 aaKnown RBP18.7■□□□□ 0.58
ECHDC3-201ENST00000379215 SLURP1P55000 103 aa18.7■□□□□ 0.58
ECHDC3-201ENST00000379215 SAMD13Q5VXD3 122 aa18.7■□□□□ 0.58
ECHDC3-201ENST00000379215 NDUFA11Q86Y39 141 aa18.7■□□□□ 0.58
ECHDC3-201ENST00000379215 ARL6IP6Q8N6S5 226 aa18.7■□□□□ 0.58
ECHDC3-201ENST00000379215 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.7■□□□□ 0.58
ECHDC3-201ENST00000379215 CLEC5AQ9NY25 188 aa18.7■□□□□ 0.58
ECHDC3-201ENST00000379215 CCL24O00175 119 aa18.69■□□□□ 0.58
ECHDC3-201ENST00000379215 EPDR1Q9UM22 224 aa18.69■□□□□ 0.58
ECHDC3-201ENST00000379215 A0A1W2PRX2 142 aa18.68■□□□□ 0.58
ECHDC3-201ENST00000379215 PEX7O00628 323 aa18.68■□□□□ 0.58
ECHDC3-201ENST00000379215 SNAPINO95295 136 aa18.68■□□□□ 0.58
ECHDC3-201ENST00000379215 ZNF674Q2M3X9 581 aa18.68■□□□□ 0.58
ECHDC3-201ENST00000379215 RAX2Q96IS3 184 aa18.68■□□□□ 0.58
ECHDC3-201ENST00000379215 C17orf77Q96MU5 243 aa18.68■□□□□ 0.58
ECHDC3-201ENST00000379215 PNRC1Q12796 327 aaPredicted RBP18.67■□□□□ 0.58
ECHDC3-201ENST00000379215 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.67■□□□□ 0.58
ECHDC3-201ENST00000379215 OR9G4Q8NGQ1 327 aa18.67■□□□□ 0.58
ECHDC3-201ENST00000379215 ATG101Q9BSB4 218 aa18.67■□□□□ 0.58
ECHDC3-201ENST00000379215 C2orf70A6NJV1 201 aa18.67■□□□□ 0.58
ECHDC3-201ENST00000379215 SLC17A3O00476 420 aa18.67■□□□□ 0.58
ECHDC3-201ENST00000379215 AKR1C3P42330 323 aa18.67■□□□□ 0.58
ECHDC3-201ENST00000379215 CSN1S1P47710 185 aa18.67■□□□□ 0.58
ECHDC3-201ENST00000379215 C2CD4CQ8TF44 421 aa18.67■□□□□ 0.58
ECHDC3-201ENST00000379215 ZNF331Q9NQX6 463 aaPredicted RBP18.67■□□□□ 0.58
ECHDC3-201ENST00000379215 NAT8Q9UHE5 227 aa18.67■□□□□ 0.58
ECHDC3-201ENST00000379215 PRELID1Q9Y255 219 aa18.67■□□□□ 0.58
ECHDC3-201ENST00000379215 S100A9P06702 114 aaKnown RBP18.66■□□□□ 0.58
ECHDC3-201ENST00000379215 CNN1P51911 297 aaKnown RBP18.66■□□□□ 0.58
ECHDC3-201ENST00000379215 EXOC3-AS1Q8N2X6 119 aa18.66■□□□□ 0.58
ECHDC3-201ENST00000379215 SERTM2A0A1B0GWG4 89 aa18.65■□□□□ 0.58
ECHDC3-201ENST00000379215 CBLN1P23435 193 aa18.65■□□□□ 0.58
ECHDC3-201ENST00000379215 GUCA2BQ16661 112 aa18.65■□□□□ 0.58
ECHDC3-201ENST00000379215 TVP23CQ96ET8 276 aa18.65■□□□□ 0.58
ECHDC3-201ENST00000379215 K7EQM0 130 aa18.64■□□□□ 0.57
ECHDC3-201ENST00000379215 TCRAP04437 139 aa18.64■□□□□ 0.57
ECHDC3-201ENST00000379215 TMEM241Q24JQ0 296 aa18.64■□□□□ 0.57
ECHDC3-201ENST00000379215 DUX3Q96PT4 197 aa18.64■□□□□ 0.57
ECHDC3-201ENST00000379215 NRN1Q9NPD7 142 aa18.64■□□□□ 0.57
ECHDC3-201ENST00000379215 C9JCJ5 164 aa18.63■□□□□ 0.57
ECHDC3-201ENST00000379215 FOLR2P14207 255 aa18.63■□□□□ 0.57
ECHDC3-201ENST00000379215 RPL35P42766 123 aaKnown RBP18.63■□□□□ 0.57
ECHDC3-201ENST00000379215 TAS2R60P59551 318 aa18.63■□□□□ 0.57
ECHDC3-201ENST00000379215 TCF24Q7RTU0 167 aa18.63■□□□□ 0.57
ECHDC3-201ENST00000379215 DLX4Q92988 240 aaPredicted RBP18.63■□□□□ 0.57
ECHDC3-201ENST00000379215 RPL11P62913 178 aaKnown RBP18.63■□□□□ 0.57
ECHDC3-201ENST00000379215 MRPL53Q96EL3 112 aaKnown RBP18.63■□□□□ 0.57
ECHDC3-201ENST00000379215 C2CD3Q4AC94 2353 aa18.63■□□□□ 0.57
ECHDC3-201ENST00000379215 ADARB2-AS1A8MUL3 147 aa18.62■□□□□ 0.57
ECHDC3-201ENST00000379215 CLRN3Q8NCR9 226 aa18.62■□□□□ 0.57
ECHDC3-201ENST00000379215 DERL1Q9BUN8 251 aa18.62■□□□□ 0.57
ECHDC3-201ENST00000379215 LY96Q9Y6Y9 160 aa18.62■□□□□ 0.57
ECHDC3-201ENST00000379215 M0R036 132 aa18.61■□□□□ 0.57
ECHDC3-201ENST00000379215 UBE2G1P62253 170 aa18.61■□□□□ 0.57
ECHDC3-201ENST00000379215 GNG5P63218 68 aa18.61■□□□□ 0.57
ECHDC3-201ENST00000379215 NSUN5P1Q3KNT7 163 aa18.61■□□□□ 0.57
ECHDC3-201ENST00000379215 AWAT1Q58HT5 328 aa18.61■□□□□ 0.57
ECHDC3-201ENST00000379215 FMC1Q96HJ9 113 aa18.61■□□□□ 0.57
ECHDC3-201ENST00000379215 C16orf92Q96LL3 132 aa18.61■□□□□ 0.57
ECHDC3-201ENST00000379215 SDF2L1Q9HCN8 221 aa18.61■□□□□ 0.57
ECHDC3-201ENST00000379215 KRTAP10-3P60369 221 aa18.6■□□□□ 0.57
ECHDC3-201ENST00000379215 RHEBQ15382 184 aa18.6■□□□□ 0.57
ECHDC3-201ENST00000379215 TMEM183BQ1AE95 376 aa18.6■□□□□ 0.57
ECHDC3-201ENST00000379215 RPH3ALQ9UNE2 315 aa18.6■□□□□ 0.57
ECHDC3-201ENST00000379215 KLF12Q9Y4X4 402 aa18.6■□□□□ 0.57
ECHDC3-201ENST00000379215 FBLL1A6NHQ2 334 aaKnown RBP18.6■□□□□ 0.57
ECHDC3-201ENST00000379215 GNG4P50150 75 aa18.6■□□□□ 0.57
ECHDC3-201ENST00000379215 HIST2H2BDQ6DRA6 164 aa18.6■□□□□ 0.57
ECHDC3-201ENST00000379215 MLXQ9UH92 298 aa18.6■□□□□ 0.57
ECHDC3-201ENST00000379215 B4DEV8 164 aa18.59■□□□□ 0.57
ECHDC3-201ENST00000379215 DIRC3C9JPN6 131 aa18.59■□□□□ 0.57
ECHDC3-201ENST00000379215 ISLRO14498 428 aa18.59■□□□□ 0.57
ECHDC3-201ENST00000379215 OVOL1O14753 267 aa18.59■□□□□ 0.57
ECHDC3-201ENST00000379215 EDN2P20800 178 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms