RNA–Protein interactions for RNA: ENST00000378746.8

KIF3A-202, Transcript of kinesin family member 3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene KIF3A, Length 6,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-202ENST00000378746 KLRD1Q13241 179 aa12.65□□□□□ -0.38
KIF3A-202ENST00000378746 CST9LQ9H4G1 147 aa12.65□□□□□ -0.38
KIF3A-202ENST00000378746 PRR31Q5SQ13 230 aa12.65□□□□□ -0.38
KIF3A-202ENST00000378746 TRAV40A0A0B4J280 105 aa12.65□□□□□ -0.38
KIF3A-202ENST00000378746 WIPF3A6NGB9 483 aa12.65□□□□□ -0.38
KIF3A-202ENST00000378746 A0A1B0GUS0 222 aa12.65□□□□□ -0.39
KIF3A-202ENST00000378746 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.39
KIF3A-202ENST00000378746 LGALS9CQ6DKI2 356 aa12.65□□□□□ -0.39
KIF3A-202ENST00000378746 C2orf82Q6UX34 121 aa12.65□□□□□ -0.39
KIF3A-202ENST00000378746 HAPLN4Q86UW8 402 aa12.65□□□□□ -0.39
KIF3A-202ENST00000378746 DTX1Q86Y01 620 aa12.65□□□□□ -0.39
KIF3A-202ENST00000378746 LINC00311Q8N616 119 aa12.65□□□□□ -0.39
KIF3A-202ENST00000378746 TRBV19A0A075B6N1 114 aa12.64□□□□□ -0.39
KIF3A-202ENST00000378746 A0A0G2JNJ9 132 aa12.64□□□□□ -0.39
KIF3A-202ENST00000378746 Q9UFV3 132 aa12.64□□□□□ -0.39
KIF3A-202ENST00000378746 SMKR1H3BMG3 65 aa12.64□□□□□ -0.39
KIF3A-202ENST00000378746 LSM4Q9Y4Z0 139 aaKnown RBP12.64□□□□□ -0.39
KIF3A-202ENST00000378746 IGHV3-64A0A075B6Q5 118 aa12.64□□□□□ -0.39
KIF3A-202ENST00000378746 TRGV4A0A0C4DH28 118 aa12.64□□□□□ -0.39
KIF3A-202ENST00000378746 TMEM141Q96I45 108 aa12.64□□□□□ -0.39
KIF3A-202ENST00000378746 NEGR1Q7Z3B1 354 aa12.64□□□□□ -0.39
KIF3A-202ENST00000378746 LGALS1P09382 135 aaKnown RBP12.64□□□□□ -0.39
KIF3A-202ENST00000378746 COX8AP10176 69 aa12.64□□□□□ -0.39
KIF3A-202ENST00000378746 ZNF474Q6S9Z5 364 aaPredicted RBP12.64□□□□□ -0.39
KIF3A-202ENST00000378746 PROK2Q9HC23 129 aa12.64□□□□□ -0.39
KIF3A-202ENST00000378746 RP1L1Q8IWN7 2480 aaPredicted RBP12.63□□□□□ -0.39
KIF3A-202ENST00000378746 C14orf178Q8N769 122 aaPredicted RBP12.63□□□□□ -0.39
KIF3A-202ENST00000378746 Q8NFD4 153 aa12.63□□□□□ -0.39
KIF3A-202ENST00000378746 MYMXA0A1B0GTQ4 84 aa12.63□□□□□ -0.39
KIF3A-202ENST00000378746 PTPRDP23468 1912 aa12.63□□□□□ -0.39
KIF3A-202ENST00000378746 PRTN3P24158 256 aa12.63□□□□□ -0.39
KIF3A-202ENST00000378746 LYPD2Q6UXB3 125 aa12.63□□□□□ -0.39
KIF3A-202ENST00000378746 CRPP02741 224 aa12.63□□□□□ -0.39
KIF3A-202ENST00000378746 RSPO1Q2MKA7 263 aaPredicted RBP12.63□□□□□ -0.39
KIF3A-202ENST00000378746 FAM110DQ8TAY7 271 aaPredicted RBP12.63□□□□□ -0.39
KIF3A-202ENST00000378746 C11orf68Q9H3H3 251 aaKnown RBP12.62□□□□□ -0.39
KIF3A-202ENST00000378746 RPL36AP83881 106 aaKnown RBP12.62□□□□□ -0.39
KIF3A-202ENST00000378746 S100A7L2Q5SY68 101 aa12.62□□□□□ -0.39
KIF3A-202ENST00000378746 Q6ZS92 163 aa12.62□□□□□ -0.39
KIF3A-202ENST00000378746 THAP8Q8NA92 274 aa12.62□□□□□ -0.39
KIF3A-202ENST00000378746 RPL36ALQ969Q0 106 aaKnown RBP12.62□□□□□ -0.39
KIF3A-202ENST00000378746 IGHV1-24A0A0C4DH33 117 aa12.62□□□□□ -0.39
KIF3A-202ENST00000378746 C17orf58Q2M2W7 97 aa12.62□□□□□ -0.39
KIF3A-202ENST00000378746 C15orf65H3BRN8 121 aa12.62□□□□□ -0.39
KIF3A-202ENST00000378746 SLAQ13239 276 aa12.62□□□□□ -0.39
KIF3A-202ENST00000378746 WDR86Q86TI4 376 aa12.62□□□□□ -0.39
KIF3A-202ENST00000378746 SPACA3Q8IXA5 215 aa12.62□□□□□ -0.39
KIF3A-202ENST00000378746 STPG4Q8N801 248 aa12.62□□□□□ -0.39
KIF3A-202ENST00000378746 PRADC1Q9BSG0 188 aa12.62□□□□□ -0.39
KIF3A-202ENST00000378746 TP53BP1Q12888 1972 aaPredicted RBP12.62□□□□□ -0.39
KIF3A-202ENST00000378746 LINC00158P58513 81 aa12.61□□□□□ -0.39
KIF3A-202ENST00000378746 VWC2Q2TAL6 325 aa12.61□□□□□ -0.39
KIF3A-202ENST00000378746 ZNF524Q96C55 264 aa12.61□□□□□ -0.39
KIF3A-202ENST00000378746 GTSF1LQ9H1H1 148 aa12.61□□□□□ -0.39
KIF3A-202ENST00000378746 WIPF2Q8TF74 440 aaPredicted RBP12.61□□□□□ -0.39
KIF3A-202ENST00000378746 TRBV20-1A0A075B6N2 111 aa12.61□□□□□ -0.39
KIF3A-202ENST00000378746 TIMM21Q9BVV7 248 aa12.61□□□□□ -0.39
KIF3A-202ENST00000378746 CFHR2P36980 270 aa12.61□□□□□ -0.39
KIF3A-202ENST00000378746 POU2AF1Q16633 256 aa12.61□□□□□ -0.39
KIF3A-202ENST00000378746 COA6Q5JTJ3 125 aaKnown RBP12.61□□□□□ -0.39
KIF3A-202ENST00000378746 TRPT1Q86TN4 253 aaKnown RBP12.61□□□□□ -0.39
KIF3A-202ENST00000378746 DTX2Q86UW9 622 aa12.61□□□□□ -0.39
KIF3A-202ENST00000378746 LY6G5BQ8NDX9 201 aa12.61□□□□□ -0.39
KIF3A-202ENST00000378746 WDR81Q562E7 1941 aa12.61□□□□□ -0.39
KIF3A-202ENST00000378746 TMEM213A2RRL7 107 aa12.6□□□□□ -0.39
KIF3A-202ENST00000378746 SIVA1O15304 175 aa12.6□□□□□ -0.39
KIF3A-202ENST00000378746 TAL2Q16559 108 aa12.6□□□□□ -0.39
KIF3A-202ENST00000378746 H3BRN7 92 aa12.6□□□□□ -0.39
KIF3A-202ENST00000378746 K7EP34 96 aa12.6□□□□□ -0.39
KIF3A-202ENST00000378746 ZNF114Q8NC26 417 aa12.6□□□□□ -0.39
KIF3A-202ENST00000378746 SRD5A1P18405 259 aa12.6□□□□□ -0.39
KIF3A-202ENST00000378746 CHCHD5Q9BSY4 110 aa12.6□□□□□ -0.39
KIF3A-202ENST00000378746 WISP1O95388 367 aa12.6□□□□□ -0.39
KIF3A-202ENST00000378746 MCRIP2Q9BUT9 160 aaKnown RBP12.6□□□□□ -0.39
KIF3A-202ENST00000378746 TEX36Q5VZQ5 186 aa12.59□□□□□ -0.39
KIF3A-202ENST00000378746 IGLL1P15814 213 aa12.59□□□□□ -0.39
KIF3A-202ENST00000378746 ERCC8Q13216 396 aa12.59□□□□□ -0.39
KIF3A-202ENST00000378746 OR11H6Q8NGC7 330 aa12.59□□□□□ -0.39
KIF3A-202ENST00000378746 NDPQ00604 133 aa12.59□□□□□ -0.39
KIF3A-202ENST00000378746 Q6ZR03 302 aa12.59□□□□□ -0.39
KIF3A-202ENST00000378746 ARHGEF17Q96PE2 2063 aaPredicted RBP12.59□□□□□ -0.39
KIF3A-202ENST00000378746 PTPRZ1P23471 2315 aaPredicted RBP12.59□□□□□ -0.39
KIF3A-202ENST00000378746 F8W1H4 67 aa12.59□□□□□ -0.39
KIF3A-202ENST00000378746 SPINK8P0C7L1 97 aa12.59□□□□□ -0.39
KIF3A-202ENST00000378746 KLF5Q13887 457 aaPredicted RBP12.59□□□□□ -0.39
KIF3A-202ENST00000378746 LINC00527Q9UJ94 153 aa12.59□□□□□ -0.39
KIF3A-202ENST00000378746 ABCA7Q8IZY2 2146 aa12.59□□□□□ -0.39
KIF3A-202ENST00000378746 PRB4P10163 310 aaPredicted RBP12.59□□□□□ -0.39
KIF3A-202ENST00000378746 PRR20EP86478 221 aa12.58□□□□□ -0.39
KIF3A-202ENST00000378746 PRR20CP86479 221 aa12.58□□□□□ -0.39
KIF3A-202ENST00000378746 PRR20DP86480 221 aa12.58□□□□□ -0.39
KIF3A-202ENST00000378746 PRR20BP86481 221 aa12.58□□□□□ -0.39
KIF3A-202ENST00000378746 PRR20AP86496 221 aa12.58□□□□□ -0.39
KIF3A-202ENST00000378746 C8orf49Q96NF6 230 aa12.58□□□□□ -0.39
KIF3A-202ENST00000378746 SPANXDQ9BXN6 97 aa12.58□□□□□ -0.39
KIF3A-202ENST00000378746 MRPL51Q4U2R6 128 aaKnown RBP12.58□□□□□ -0.4
KIF3A-202ENST00000378746 TCF20Q9UGU0 1960 aaKnown RBP12.58□□□□□ -0.4
KIF3A-202ENST00000378746 PYGO2Q9BRQ0 406 aa12.58□□□□□ -0.4
KIF3A-202ENST00000378746 RHPN1-AS1Q9BWJ2 59 aa12.58□□□□□ -0.4
KIF3A-202ENST00000378746 LEPROTO15243 131 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms