RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 Q8TAT8 98 aa17.13■□□□□ 0.33
TGFBR1-202ENST00000374994 LRRK1Q38SD2 2015 aa17.13■□□□□ 0.33
TGFBR1-202ENST00000374994 POU2AF1Q16633 256 aa17.13■□□□□ 0.33
TGFBR1-202ENST00000374994 VWC2Q2TAL6 325 aa17.12■□□□□ 0.33
TGFBR1-202ENST00000374994 PRSS22Q9GZN4 317 aa17.12■□□□□ 0.33
TGFBR1-202ENST00000374994 TNFRSF6BO95407 300 aa17.12■□□□□ 0.33
TGFBR1-202ENST00000374994 ZNF114Q8NC26 417 aa17.12■□□□□ 0.33
TGFBR1-202ENST00000374994 NDUFB8O95169 186 aa17.12■□□□□ 0.33
TGFBR1-202ENST00000374994 SSC4DQ8WTU2 575 aa17.12■□□□□ 0.33
TGFBR1-202ENST00000374994 WDR86Q86TI4 376 aa17.12■□□□□ 0.33
TGFBR1-202ENST00000374994 LINC00311Q8N616 119 aa17.12■□□□□ 0.33
TGFBR1-202ENST00000374994 PLXNA2O75051 1894 aa17.11■□□□□ 0.33
TGFBR1-202ENST00000374994 WDR81Q562E7 1941 aa17.11■□□□□ 0.33
TGFBR1-202ENST00000374994 PRR31Q5SQ13 230 aa17.11■□□□□ 0.33
TGFBR1-202ENST00000374994 SLAQ13239 276 aa17.11■□□□□ 0.33
TGFBR1-202ENST00000374994 TOMM7Q9P0U1 55 aa17.11■□□□□ 0.33
TGFBR1-202ENST00000374994 FNDC1Q4ZHG4 1894 aaPredicted RBP17.11■□□□□ 0.33
TGFBR1-202ENST00000374994 TRBV19A0A075B6N1 114 aa17.11■□□□□ 0.33
TGFBR1-202ENST00000374994 ZNF474Q6S9Z5 364 aaPredicted RBP17.11■□□□□ 0.33
TGFBR1-202ENST00000374994 C15orf65H3BRN8 121 aa17.11■□□□□ 0.33
TGFBR1-202ENST00000374994 PRR20EP86478 221 aa17.1■□□□□ 0.33
TGFBR1-202ENST00000374994 PRR20CP86479 221 aa17.1■□□□□ 0.33
TGFBR1-202ENST00000374994 PRR20DP86480 221 aa17.1■□□□□ 0.33
TGFBR1-202ENST00000374994 PRR20BP86481 221 aa17.1■□□□□ 0.33
TGFBR1-202ENST00000374994 PRR20AP86496 221 aa17.1■□□□□ 0.33
TGFBR1-202ENST00000374994 TMEM155Q4W5P6 130 aa17.1■□□□□ 0.33
TGFBR1-202ENST00000374994 TMEM8BA6NDV4 472 aa17.1■□□□□ 0.33
TGFBR1-202ENST00000374994 LGALS9BQ3B8N2 356 aa17.1■□□□□ 0.33
TGFBR1-202ENST00000374994 LGALS9CQ6DKI2 356 aa17.1■□□□□ 0.33
TGFBR1-202ENST00000374994 TMEM95Q3KNT9 176 aa17.1■□□□□ 0.33
TGFBR1-202ENST00000374994 COX8AP10176 69 aa17.1■□□□□ 0.33
TGFBR1-202ENST00000374994 C9orf118A6NHY6 69 aa17.09■□□□□ 0.33
TGFBR1-202ENST00000374994 WIPF2Q8TF74 440 aaPredicted RBP17.09■□□□□ 0.33
TGFBR1-202ENST00000374994 IGLL1P15814 213 aa17.09■□□□□ 0.33
TGFBR1-202ENST00000374994 TRPM7Q96QT4 1865 aa17.09■□□□□ 0.33
TGFBR1-202ENST00000374994 KIR2DL5BA0A0G2JN68 375 aa17.09■□□□□ 0.33
TGFBR1-202ENST00000374994 KIR2DL5BA0A0G2JPC4 375 aa17.09■□□□□ 0.33
TGFBR1-202ENST00000374994 KIR2DL5AQ8N109 375 aa17.09■□□□□ 0.33
TGFBR1-202ENST00000374994 PGPEP1Q9NXJ5 209 aa17.09■□□□□ 0.33
TGFBR1-202ENST00000374994 EFNA4P52798 201 aa17.09■□□□□ 0.33
TGFBR1-202ENST00000374994 FXYD7P58549 80 aa17.09■□□□□ 0.33
TGFBR1-202ENST00000374994 Q6ZR03 302 aa17.09■□□□□ 0.33
TGFBR1-202ENST00000374994 SPACA3Q8IXA5 215 aa17.09■□□□□ 0.33
TGFBR1-202ENST00000374994 USMG5Q96IX5 58 aa17.09■□□□□ 0.33
TGFBR1-202ENST00000374994 NPSP0C0P6 89 aa17.08■□□□□ 0.33
TGFBR1-202ENST00000374994 Q6ZS92 163 aa17.08■□□□□ 0.33
TGFBR1-202ENST00000374994 Q5PR19 223 aa17.08■□□□□ 0.32
TGFBR1-202ENST00000374994 TRGV2A0A075B6R0 118 aa17.08■□□□□ 0.32
TGFBR1-202ENST00000374994 FAM223BA6NKX1 122 aa17.08■□□□□ 0.32
TGFBR1-202ENST00000374994 FAM223AQ8IWN6 122 aa17.08■□□□□ 0.32
TGFBR1-202ENST00000374994 CFAP161Q6P656 301 aa17.08■□□□□ 0.32
TGFBR1-202ENST00000374994 Q8N8P6 123 aa17.08■□□□□ 0.32
TGFBR1-202ENST00000374994 MDC1Q14676 2089 aaKnown RBP17.07■□□□□ 0.32
TGFBR1-202ENST00000374994 PRTN3P24158 256 aa17.07■□□□□ 0.32
TGFBR1-202ENST00000374994 C17orf58Q2M2W7 97 aa17.07■□□□□ 0.32
TGFBR1-202ENST00000374994 SPANXA1Q9NS26 97 aa17.07■□□□□ 0.32
TGFBR1-202ENST00000374994 ADAMTSL5Q6ZMM2 481 aa17.07■□□□□ 0.32
TGFBR1-202ENST00000374994 STPG4Q8N801 248 aa17.07■□□□□ 0.32
TGFBR1-202ENST00000374994 RNF138Q8WVD3 245 aa17.07■□□□□ 0.32
TGFBR1-202ENST00000374994 CSTL1Q9H114 145 aa17.07■□□□□ 0.32
TGFBR1-202ENST00000374994 THAP8Q8NA92 274 aa17.06■□□□□ 0.32
TGFBR1-202ENST00000374994 IGHV1-24A0A0C4DH33 117 aa17.06■□□□□ 0.32
TGFBR1-202ENST00000374994 CKS1BP61024 79 aa17.06■□□□□ 0.32
TGFBR1-202ENST00000374994 SRRM4A7MD48 611 aaKnown RBP17.06■□□□□ 0.32
TGFBR1-202ENST00000374994 SMKR1H3BMG3 65 aa17.06■□□□□ 0.32
TGFBR1-202ENST00000374994 SRSF6Q13247 344 aaKnown RBP17.05■□□□□ 0.32
TGFBR1-202ENST00000374994 ZNF876PQ49A33 203 aa17.05■□□□□ 0.32
TGFBR1-202ENST00000374994 LYPD2Q6UXB3 125 aa17.05■□□□□ 0.32
TGFBR1-202ENST00000374994 MCRIP2Q9BUT9 160 aaKnown RBP17.05■□□□□ 0.32
TGFBR1-202ENST00000374994 C14orf178Q8N769 122 aaPredicted RBP17.04■□□□□ 0.32
TGFBR1-202ENST00000374994 GTSF1LQ9H1H1 148 aa17.04■□□□□ 0.32
TGFBR1-202ENST00000374994 A0A0G2JNJ9 132 aa17.04■□□□□ 0.32
TGFBR1-202ENST00000374994 Q9UFV3 132 aa17.04■□□□□ 0.32
TGFBR1-202ENST00000374994 KLF5Q13887 457 aaPredicted RBP17.04■□□□□ 0.32
TGFBR1-202ENST00000374994 TMEM213A2RRL7 107 aa17.04■□□□□ 0.32
TGFBR1-202ENST00000374994 SSBP2P81877 361 aaPredicted RBP17.04■□□□□ 0.32
TGFBR1-202ENST00000374994 SIVA1O15304 175 aa17.04■□□□□ 0.32
TGFBR1-202ENST00000374994 TEX36Q5VZQ5 186 aa17.03■□□□□ 0.32
TGFBR1-202ENST00000374994 KLRD1Q13241 179 aa17.03■□□□□ 0.32
TGFBR1-202ENST00000374994 K7EP34 96 aa17.03■□□□□ 0.32
TGFBR1-202ENST00000374994 LY6G6EA0A0G2JKS1 128 aa17.03■□□□□ 0.32
TGFBR1-202ENST00000374994 STHQ8IWL8 128 aa17.03■□□□□ 0.32
TGFBR1-202ENST00000374994 U3KQA8 63 aa17.03■□□□□ 0.32
TGFBR1-202ENST00000374994 ZNF503-AS2A6NEH8 195 aa17.03■□□□□ 0.32
TGFBR1-202ENST00000374994 NEGR1Q7Z3B1 354 aa17.03■□□□□ 0.32
TGFBR1-202ENST00000374994 IGLV1-44P01699 117 aa17.02■□□□□ 0.32
TGFBR1-202ENST00000374994 TAL2Q16559 108 aa17.02■□□□□ 0.32
TGFBR1-202ENST00000374994 FAM110DQ8TAY7 271 aaPredicted RBP17.02■□□□□ 0.32
TGFBR1-202ENST00000374994 TRAV40A0A0B4J280 105 aa17.02■□□□□ 0.32
TGFBR1-202ENST00000374994 CMC4P56277 68 aaPredicted RBP17.02■□□□□ 0.31
TGFBR1-202ENST00000374994 WT1-ASQ06250 92 aa17.02■□□□□ 0.31
TGFBR1-202ENST00000374994 RASL10AQ92737 203 aa17.02■□□□□ 0.31
TGFBR1-202ENST00000374994 TRBV20-1A0A075B6N2 111 aa17.01■□□□□ 0.31
TGFBR1-202ENST00000374994 TRAV12-3A0A0B4J271 114 aa17.01■□□□□ 0.31
TGFBR1-202ENST00000374994 TMEM86BQ8N661 226 aa17.01■□□□□ 0.31
TGFBR1-202ENST00000374994 FXYD5Q96DB9 178 aa17.01■□□□□ 0.31
TGFBR1-202ENST00000374994 H3BRN7 92 aa17.01■□□□□ 0.31
TGFBR1-202ENST00000374994 PF4P02776 101 aa17.01■□□□□ 0.31
TGFBR1-202ENST00000374994 C2orf82Q6UX34 121 aa17.01■□□□□ 0.31
TGFBR1-202ENST00000374994 LSM4Q9Y4Z0 139 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms