RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 C1orf229Q6ZS94 237 aaPredicted RBP9.77□□□□□ -0.84
NCDN-202ENST00000373243 SPACA3Q8IXA5 215 aa9.77□□□□□ -0.84
NCDN-202ENST00000373243 GAFA1Q96PS6 74 aa9.77□□□□□ -0.84
NCDN-202ENST00000373243 TPSG1Q9NRR2 321 aa9.77□□□□□ -0.84
NCDN-202ENST00000373243 FAM90A9PA6NNJ1 464 aa9.77□□□□□ -0.85
NCDN-202ENST00000373243 RPL11P62913 178 aaKnown RBP9.77□□□□□ -0.85
NCDN-202ENST00000373243 GUSBP1Q15486 140 aa9.77□□□□□ -0.85
NCDN-202ENST00000373243 RPP21Q9H633 154 aaKnown RBP9.77□□□□□ -0.85
NCDN-202ENST00000373243 RABAC1Q9UI14 185 aa9.77□□□□□ -0.85
NCDN-202ENST00000373243 LINC00312Q9Y6C7 94 aa9.77□□□□□ -0.85
NCDN-202ENST00000373243 TCRBV4S1A1TA0A5B7 111 aa9.77□□□□□ -0.85
NCDN-202ENST00000373243 ZNF785A8K8V0 405 aa9.77□□□□□ -0.85
NCDN-202ENST00000373243 IL4P05112 153 aa9.77□□□□□ -0.85
NCDN-202ENST00000373243 PPIFP30405 207 aaKnown RBP9.77□□□□□ -0.85
NCDN-202ENST00000373243 TMEM249Q2WGJ8 235 aa9.77□□□□□ -0.85
NCDN-202ENST00000373243 TMEM200BQ69YZ2 307 aa9.77□□□□□ -0.85
NCDN-202ENST00000373243 C17orf100A8MU93 164 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 RIGQ13278 110 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 C2orf83Q53S99 150 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 KLF17Q5JT82 389 aaPredicted RBP9.76□□□□□ -0.85
NCDN-202ENST00000373243 SCRT2Q9NQ03 307 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 A1L4Q6 167 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 OR2J3O76001 311 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 P0C879 139 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 PRR20EP86478 221 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 PRR20CP86479 221 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 PRR20DP86480 221 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 PRR20BP86481 221 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 PRR20AP86496 221 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 A0A1B0GWB2 263 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 APOHP02749 345 aaPredicted RBP9.76□□□□□ -0.85
NCDN-202ENST00000373243 PRSS1P07477 247 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 TCTEX1D4Q5JR98 221 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 C18orf15Q96N68 181 aa9.76□□□□□ -0.85
NCDN-202ENST00000373243 IGKV3-7A0A075B6H7 116 aa9.75□□□□□ -0.85
NCDN-202ENST00000373243 K7EMI3 77 aa9.75□□□□□ -0.85
NCDN-202ENST00000373243 WT1-ASQ06250 92 aa9.75□□□□□ -0.85
NCDN-202ENST00000373243 TEX45Q8NA69 505 aa9.75□□□□□ -0.85
NCDN-202ENST00000373243 IGFBPL1Q8WX77 278 aa9.75□□□□□ -0.85
NCDN-202ENST00000373243 AP5S1Q9NUS5 200 aa9.75□□□□□ -0.85
NCDN-202ENST00000373243 K7ERJ3 54 aa9.75□□□□□ -0.85
NCDN-202ENST00000373243 SMIM13P0DJ93 91 aa9.75□□□□□ -0.85
NCDN-202ENST00000373243 ID1P41134 155 aa9.75□□□□□ -0.85
NCDN-202ENST00000373243 AMTNQ6UX39 209 aa9.75□□□□□ -0.85
NCDN-202ENST00000373243 IGHV3-49A0A0A0MS15 119 aa9.75□□□□□ -0.85
NCDN-202ENST00000373243 CNTFRP26992 372 aa9.75□□□□□ -0.85
NCDN-202ENST00000373243 SPAG8Q99932 426 aaPredicted RBP9.75□□□□□ -0.85
NCDN-202ENST00000373243 H3BMG7 143 aa9.74□□□□□ -0.85
NCDN-202ENST00000373243 SLC25A48Q6ZT89 311 aaKnown RBP9.74□□□□□ -0.85
NCDN-202ENST00000373243 TMUB1Q9BVT8 246 aa9.74□□□□□ -0.85
NCDN-202ENST00000373243 TM4SF5O14894 197 aa9.74□□□□□ -0.85
NCDN-202ENST00000373243 IGHG3P01860 377 aa9.74□□□□□ -0.85
NCDN-202ENST00000373243 CFHR2P36980 270 aa9.74□□□□□ -0.85
NCDN-202ENST00000373243 SYT8Q8NBV8 401 aa9.74□□□□□ -0.85
NCDN-202ENST00000373243 LINC01560Q8TB33 94 aa9.74□□□□□ -0.85
NCDN-202ENST00000373243 E7EUB6 86 aa9.74□□□□□ -0.85
NCDN-202ENST00000373243 M0R3E3 92 aa9.74□□□□□ -0.85
NCDN-202ENST00000373243 LIPFP07098 398 aa9.74□□□□□ -0.85
NCDN-202ENST00000373243 INSL3P51460 131 aa9.74□□□□□ -0.85
NCDN-202ENST00000373243 C20orf78Q9BR46 151 aa9.74□□□□□ -0.85
NCDN-202ENST00000373243 SCNM1Q9BWG6 230 aa9.74□□□□□ -0.85
NCDN-202ENST00000373243 NHP2Q9NX24 153 aaKnown RBP9.74□□□□□ -0.85
NCDN-202ENST00000373243 A0A1W2PPI3 338 aa9.73□□□□□ -0.85
NCDN-202ENST00000373243 LY6HO94772 140 aa9.73□□□□□ -0.85
NCDN-202ENST00000373243 CD3EP07766 207 aa9.73□□□□□ -0.85
NCDN-202ENST00000373243 TMPRSS3P57727 454 aa9.73□□□□□ -0.85
NCDN-202ENST00000373243 GAGE5Q13069 117 aa9.73□□□□□ -0.85
NCDN-202ENST00000373243 GAGE6Q13070 117 aa9.73□□□□□ -0.85
NCDN-202ENST00000373243 IGHV3-66A0A0C4DH42 116 aa9.73□□□□□ -0.85
NCDN-202ENST00000373243 FOXC1Q12948 553 aa9.73□□□□□ -0.85
NCDN-202ENST00000373243 TWIST1Q15672 202 aa9.73□□□□□ -0.85
NCDN-202ENST00000373243 RBPMS2Q6ZRY4 209 aaKnown RBP9.73□□□□□ -0.85
NCDN-202ENST00000373243 ZNF329Q86UD4 541 aa9.73□□□□□ -0.85
NCDN-202ENST00000373243 C11orf52Q96A22 123 aa9.73□□□□□ -0.85
NCDN-202ENST00000373243 IGHV1-24A0A0C4DH33 117 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 COX8AP10176 69 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 SLC25A2Q9BXI2 301 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 SPRY4Q9C004 299 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 PGPEP1Q9NXJ5 209 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 CYSLTR1Q9Y271 337 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 CKS2P33552 79 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 COL4A2P08572 1712 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 A0A1B0GUT8 65 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 TMEM189A5PLL7 270 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 FAM169BQ8N8A8 192 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 TIMD4Q96H15 378 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 LY96Q9Y6Y9 160 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 CSPG4Q6UVK1 2322 aa9.72□□□□□ -0.85
NCDN-202ENST00000373243 APOMO95445 188 aa9.71□□□□□ -0.85
NCDN-202ENST00000373243 IGFL4Q6B9Z1 124 aa9.71□□□□□ -0.85
NCDN-202ENST00000373243 NDFIP1Q9BT67 221 aa9.71□□□□□ -0.85
NCDN-202ENST00000373243 ARHGAP32A7KAX9 2087 aa9.71□□□□□ -0.85
NCDN-202ENST00000373243 ZNF418Q8TF45 676 aaPredicted RBP9.71□□□□□ -0.85
NCDN-202ENST00000373243 MS4A6AQ9H2W1 248 aa9.71□□□□□ -0.85
NCDN-202ENST00000373243 MRPL36Q9P0J6 103 aaKnown RBP9.71□□□□□ -0.85
NCDN-202ENST00000373243 PIEZO1Q92508 2521 aa9.71□□□□□ -0.85
NCDN-202ENST00000373243 IGLV1-44P01699 117 aa9.71□□□□□ -0.86
NCDN-202ENST00000373243 MT-ATP8P03928 68 aa9.71□□□□□ -0.86
NCDN-202ENST00000373243 ECSCRQ19T08 205 aa9.71□□□□□ -0.86
NCDN-202ENST00000373243 SFTA2Q6UW10 78 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms