RNA–Protein interactions for RNA: ENST00000371974.7

SURF1-201, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SURF1, Length 1,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-201ENST00000371974 TRAV5A0A0B4J249 113 aa18.46■□□□□ 0.55
SURF1-201ENST00000371974 GIPP09681 153 aaPredicted RBP18.46■□□□□ 0.55
SURF1-201ENST00000371974 CSNK1G2-AS1Q8NCQ2 148 aa18.46■□□□□ 0.55
SURF1-201ENST00000371974 ZNF738Q8NE65 137 aa18.46■□□□□ 0.55
SURF1-201ENST00000371974 SCGB1C1Q8TD33 95 aa18.46■□□□□ 0.55
SURF1-201ENST00000371974 SLC50A1Q9BRV3 221 aa18.46■□□□□ 0.55
SURF1-201ENST00000371974 XCL2Q9UBD3 114 aa18.46■□□□□ 0.55
SURF1-201ENST00000371974 DUSP14O95147 198 aaKnown RBP18.45■□□□□ 0.54
SURF1-201ENST00000371974 PSG9Q00887 426 aa18.45■□□□□ 0.54
SURF1-201ENST00000371974 HRH4Q9H3N8 390 aa18.45■□□□□ 0.54
SURF1-201ENST00000371974 PSG3Q16557 428 aa18.44■□□□□ 0.54
SURF1-201ENST00000371974 GUK1Q16774 197 aa18.44■□□□□ 0.54
SURF1-201ENST00000371974 SNRPCP09234 159 aaKnown RBP18.43■□□□□ 0.54
SURF1-201ENST00000371974 IGLC2P0DOY2 106 aa18.43■□□□□ 0.54
SURF1-201ENST00000371974 GCSAMLQ5JQS6 135 aa18.43■□□□□ 0.54
SURF1-201ENST00000371974 C11orf68Q9H3H3 251 aaKnown RBP18.43■□□□□ 0.54
SURF1-201ENST00000371974 ZNF331Q9NQX6 463 aaPredicted RBP18.43■□□□□ 0.54
SURF1-201ENST00000371974 ZNF705EA8MWA4 302 aaPredicted RBP18.42■□□□□ 0.54
SURF1-201ENST00000371974 FXYD7P58549 80 aa18.42■□□□□ 0.54
SURF1-201ENST00000371974 PARD6GQ9BYG4 376 aaPredicted RBP18.42■□□□□ 0.54
SURF1-201ENST00000371974 H3BQ15 152 aa18.41■□□□□ 0.54
SURF1-201ENST00000371974 MIFP14174 115 aa18.41■□□□□ 0.54
SURF1-201ENST00000371974 HLA-DMBP28068 263 aa18.41■□□□□ 0.54
SURF1-201ENST00000371974 TMEM14CQ9P0S9 112 aa18.41■□□□□ 0.54
SURF1-201ENST00000371974 A8MTW9 85 aa18.4■□□□□ 0.54
SURF1-201ENST00000371974 H3BTX0 84 aa18.4■□□□□ 0.54
SURF1-201ENST00000371974 CNN1P51911 297 aaKnown RBP18.4■□□□□ 0.54
SURF1-201ENST00000371974 SAT2Q96F10 170 aaPredicted RBP18.4■□□□□ 0.54
SURF1-201ENST00000371974 MFFQ9GZY8 342 aa18.4■□□□□ 0.54
SURF1-201ENST00000371974 SLC35B3Q9H1N7 401 aa18.4■□□□□ 0.54
SURF1-201ENST00000371974 WFDC1Q9HC57 220 aa18.4■□□□□ 0.54
SURF1-201ENST00000371974 OR8A1Q8NGG7 326 aa18.39■□□□□ 0.53
SURF1-201ENST00000371974 RPUSD4Q96CM3 377 aaKnown RBP18.39■□□□□ 0.53
SURF1-201ENST00000371974 AQP10Q96PS8 301 aa18.39■□□□□ 0.53
SURF1-201ENST00000371974 MRPL32Q9BYC8 188 aaKnown RBP18.39■□□□□ 0.53
SURF1-201ENST00000371974 X6R8D5 127 aa18.39■□□□□ 0.53
SURF1-201ENST00000371974 SLC17A3O00476 420 aa18.38■□□□□ 0.53
SURF1-201ENST00000371974 DEFB4AO15263 64 aa18.38■□□□□ 0.53
SURF1-201ENST00000371974 ZNF705DP0CH99 300 aaPredicted RBP18.38■□□□□ 0.53
SURF1-201ENST00000371974 ZNF705BP0CI00 300 aaPredicted RBP18.38■□□□□ 0.53
SURF1-201ENST00000371974 HIST1H1EP10412 219 aaKnown RBP18.38■□□□□ 0.53
SURF1-201ENST00000371974 Q5BKY6 102 aa18.38■□□□□ 0.53
SURF1-201ENST00000371974 FFAR4Q5NUL3 377 aa18.38■□□□□ 0.53
SURF1-201ENST00000371974 Q8NAQ8 132 aa18.38■□□□□ 0.53
SURF1-201ENST00000371974 ZNF586Q9NXT0 402 aa18.38■□□□□ 0.53
SURF1-201ENST00000371974 IGHV4-28A0A0C4DH34 117 aa18.37■□□□□ 0.53
SURF1-201ENST00000371974 ZNF253O75346 499 aa18.37■□□□□ 0.53
SURF1-201ENST00000371974 HIST1H1AQ02539 215 aaPredicted RBP18.37■□□□□ 0.53
SURF1-201ENST00000371974 AMTNQ6UX39 209 aa18.37■□□□□ 0.53
SURF1-201ENST00000371974 MIR17HGQ75NE6 70 aa18.37■□□□□ 0.53
SURF1-201ENST00000371974 INO80EQ8NBZ0 244 aaPredicted RBP18.37■□□□□ 0.53
SURF1-201ENST00000371974 OR2T35Q8NGX2 323 aa18.37■□□□□ 0.53
SURF1-201ENST00000371974 DNAH7Q8WXX0 4024 aa18.37■□□□□ 0.53
SURF1-201ENST00000371974 CXorf65A6NEN9 183 aa18.36■□□□□ 0.53
SURF1-201ENST00000371974 AMBPP02760 352 aa18.36■□□□□ 0.53
SURF1-201ENST00000371974 PMS2P11Q13670 270 aa18.36■□□□□ 0.53
SURF1-201ENST00000371974 ZNF266Q14584 549 aa18.36■□□□□ 0.53
SURF1-201ENST00000371974 SLC25A2Q9BXI2 301 aa18.36■□□□□ 0.53
SURF1-201ENST00000371974 PPP1R14DQ9NXH3 145 aa18.36■□□□□ 0.53
SURF1-201ENST00000371974 FUT9Q9Y231 359 aa18.36■□□□□ 0.53
SURF1-201ENST00000371974 TIMM9Q9Y5J7 89 aa18.36■□□□□ 0.53
SURF1-201ENST00000371974 TRBV19A0A075B6N1 114 aa18.35■□□□□ 0.53
SURF1-201ENST00000371974 PYYP10082 97 aa18.35■□□□□ 0.53
SURF1-201ENST00000371974 RHOBP62745 196 aa18.35■□□□□ 0.53
SURF1-201ENST00000371974 ZNF705AQ6ZN79 300 aaPredicted RBP18.35■□□□□ 0.53
SURF1-201ENST00000371974 C11orf45Q8TAV5 145 aa18.35■□□□□ 0.53
SURF1-201ENST00000371974 GOLT1BQ9Y3E0 138 aa18.35■□□□□ 0.53
SURF1-201ENST00000371974 ZNF705FA8MVS1 300 aaPredicted RBP18.34■□□□□ 0.53
SURF1-201ENST00000371974 RBMY1A1P0DJD3 496 aaKnown RBP18.34■□□□□ 0.53
SURF1-201ENST00000371974 RBMY1CP0DJD4 496 aa18.34■□□□□ 0.53
SURF1-201ENST00000371974 PDE6HQ13956 83 aa18.34■□□□□ 0.53
SURF1-201ENST00000371974 RBMY1FQ15415 496 aaKnown RBP18.34■□□□□ 0.53
SURF1-201ENST00000371974 FAM167A-AS1Q96KT0 104 aa18.34■□□□□ 0.53
SURF1-201ENST00000371974 NEU1Q99519 415 aa18.34■□□□□ 0.53
SURF1-201ENST00000371974 OR51M1Q9H341 326 aa18.34■□□□□ 0.53
SURF1-201ENST00000371974 IGHV3OR16-12A0A075B7B8 117 aa18.33■□□□□ 0.52
SURF1-201ENST00000371974 FXYD6-FXYD2A0A087WZ82 144 aa18.33■□□□□ 0.52
SURF1-201ENST00000371974 OR10J6PQ8NGY7 276 aa18.33■□□□□ 0.52
SURF1-201ENST00000371974 BLNKQ8WV28 456 aa18.33■□□□□ 0.52
SURF1-201ENST00000371974 IGF2BP2-AS1Q96M15 143 aa18.33■□□□□ 0.52
SURF1-201ENST00000371974 SMIM9A6NGZ8 99 aa18.32■□□□□ 0.52
SURF1-201ENST00000371974 SPINK13Q1W4C9 94 aa18.32■□□□□ 0.52
SURF1-201ENST00000371974 PAXXQ9BUH6 204 aa18.32■□□□□ 0.52
SURF1-201ENST00000371974 NUPR2A6NF83 97 aa18.31■□□□□ 0.52
SURF1-201ENST00000371974 BOLA2-SMG1P6H3BVE0 249 aa18.31■□□□□ 0.52
SURF1-201ENST00000371974 M0R2Z0 102 aa18.31■□□□□ 0.52
SURF1-201ENST00000371974 NBEAP1P0C6P0 100 aa18.31■□□□□ 0.52
SURF1-201ENST00000371974 ACOT6Q3I5F7 207 aaPredicted RBP18.31■□□□□ 0.52
SURF1-201ENST00000371974 TNFSF18Q9UNG2 199 aa18.31■□□□□ 0.52
SURF1-201ENST00000371974 PRELID1Q9Y255 219 aa18.31■□□□□ 0.52
SURF1-201ENST00000371974 OR7C2O60412 319 aa18.3■□□□□ 0.52
SURF1-201ENST00000371974 NDUFB4O95168 129 aa18.3■□□□□ 0.52
SURF1-201ENST00000371974 PRB4P10163 310 aaPredicted RBP18.3■□□□□ 0.52
SURF1-201ENST00000371974 TAS2R45P59539 299 aa18.3■□□□□ 0.52
SURF1-201ENST00000371974 MRPL53Q96EL3 112 aaKnown RBP18.3■□□□□ 0.52
SURF1-201ENST00000371974 TMEM208Q9BTX3 173 aa18.3■□□□□ 0.52
SURF1-201ENST00000371974 AAMDCQ9H7C9 122 aa18.3■□□□□ 0.52
SURF1-201ENST00000371974 INSP01308 110 aa18.29■□□□□ 0.52
SURF1-201ENST00000371974 M6PRP20645 277 aa18.29■□□□□ 0.52
SURF1-201ENST00000371974 NANOS2P60321 138 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms