RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 AGPAT2O15120 278 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 TCAPO15273 167 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 YIF1AO95070 293 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 BRI3O95415 125 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 HIST1H1BP16401 226 aaKnown RBP2.72□□□□□ -1.97
MCF2-202ENST00000370573 GATA2P23769 480 aaPredicted RBP2.72□□□□□ -1.97
MCF2-202ENST00000370573 OR10J1P30954 320 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 ZNF90Q03938 601 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 AKR1C1Q04828 323 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 ZNF266Q14584 549 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 HAGHQ16775 308 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 TIGITQ495A1 244 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 MIC13Q5XKP0 118 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 MAPKAPK5-AS1Q8N8E1 139 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 OR1L6Q8NGR2 347 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 OR2G3Q8NGZ4 309 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 OR4X1Q8NH49 305 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 ZNF502Q8TBZ5 544 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 SCGB1C1Q8TD33 95 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 SLC35E1Q96K37 410 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 GGTLC1Q9BX51 225 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 VSIRQ9H7M9 311 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 ZNF355PQ9NSJ1 428 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 TENM1Q9UKZ4 2725 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 HELTA6NFD8 242 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 CORTO00230 105 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 GGCTO75223 188 aaKnown RBP2.72□□□□□ -1.97
MCF2-202ENST00000370573 IGKV1-17P01599 117 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 IGHG4P01861 327 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 TRGV3P03979 118 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 NMBP08949 121 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 SEC11BP0C7V7 166 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 IGLC1P0CG04 106 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 FHITP49789 147 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 RAB9AP51151 201 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 PKIAP61925 76 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 EIF5AP63241 154 aaKnown RBP2.72□□□□□ -1.97
MCF2-202ENST00000370573 ATP5G2Q06055 141 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 C15orf32Q32M92 178 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 GCSAMLQ5JQS6 135 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 TCTEX1D4Q5JR98 221 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 C10orf91Q5T1B1 145 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 COX8CQ7Z4L0 72 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 C15orf54Q8N8G6 183 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 NECAP1Q8NC96 275 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 LINC01006Q8NI28 216 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 VN1R17PQ8TDU5 208 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 GNPNAT1Q96EK6 184 aaPredicted RBP2.72□□□□□ -1.97
MCF2-202ENST00000370573 PHYHIPLQ96FC7 376 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 SGK494Q96LW2 274 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 C16orf95Q9H693 158 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 TUBA4BQ9H853 241 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 C21orf62Q9NYP8 219 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 TECRQ9NZ01 308 aaKnown RBP2.72□□□□□ -1.97
MCF2-202ENST00000370573 CARHSP1Q9Y2V2 147 aaKnown RBP2.72□□□□□ -1.97
MCF2-202ENST00000370573 TIMM9Q9Y5J7 89 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 PSMB11A5LHX3 300 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 H3BUA1 57 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 MPDU1O75352 247 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 CTSGP08311 255 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 PSMB8P28062 276 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 BMI1P35226 326 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 SULT1A2P50226 295 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 TPPP2P59282 170 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 PATE2Q6UY27 113 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 CYP2G1PQ6ZSU1 146 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 SSX7Q7RTT5 188 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 MYOZ3Q8TDC0 251 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 TRGV9Q99603 122 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 PSMG3Q9BT73 122 aaPredicted RBP2.71□□□□□ -1.98
MCF2-202ENST00000370573 CHRDL1Q9BU40 450 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 RPRMQ9NS64 109 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 THYN1Q9P016 225 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 PXMP4Q9Y6I8 212 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 TCRBV4S1A1TA0A5B7 111 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 OR2T8A6NH00 312 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 FAM223BA6NKX1 122 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 ZFP92A6NM28 416 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 H0Y8G0 127 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 CYB5BO43169 146 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 TCF21O43680 179 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 NDUFA7O95182 113 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 TRBV12-3P01733 135 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 IGHV3-11P01762 117 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 CRYBA1P05813 215 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 RPL29P47914 159 aaKnown RBP2.71□□□□□ -1.98
MCF2-202ENST00000370573 NUTF2P61970 127 aaKnown RBP2.71□□□□□ -1.98
MCF2-202ENST00000370573 ZNF726P1Q15940 193 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 Q56UQ5 140 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 FFAR4Q5NUL3 377 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 CLEC19AQ6UXS0 136 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 C18orf65Q6ZTR6 163 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 FAM223AQ8IWN6 122 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 RPP25LQ8N5L8 163 aaKnown RBP2.71□□□□□ -1.98
MCF2-202ENST00000370573 ZNF491Q8N8L2 437 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 BPIFCQ8NFQ6 507 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 EEF1AKMT3Q96AZ1 226 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 C14orf144Q96I85 54 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 USMG5Q96IX5 58 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms