RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 CKS2P33552 79 aa12.82□□□□□ -0.36
CHD1L-203ENST00000369259 CXCL12P48061 93 aa12.82□□□□□ -0.36
CHD1L-203ENST00000369259 MSMPQ1L6U9 139 aa12.82□□□□□ -0.36
CHD1L-203ENST00000369259 C12orf74Q32Q52 190 aa12.82□□□□□ -0.36
CHD1L-203ENST00000369259 HCP5Q6MZN7 132 aa12.82□□□□□ -0.36
CHD1L-203ENST00000369259 TTC9CQ8N5M4 171 aa12.82□□□□□ -0.36
CHD1L-203ENST00000369259 NAV3Q8IVL0 2385 aa12.82□□□□□ -0.36
CHD1L-203ENST00000369259 IGLV1-44P01699 117 aa12.81□□□□□ -0.36
CHD1L-203ENST00000369259 IGKCP01834 107 aa12.81□□□□□ -0.36
CHD1L-203ENST00000369259 DSCAML1Q8TD84 2053 aa12.81□□□□□ -0.36
CHD1L-203ENST00000369259 PRR14LQ5THK1 2151 aa12.81□□□□□ -0.36
CHD1L-203ENST00000369259 IGHV1-18A0A0C4DH31 117 aa12.81□□□□□ -0.36
CHD1L-203ENST00000369259 SMKR1H3BMG3 65 aa12.81□□□□□ -0.36
CHD1L-203ENST00000369259 HLA-DRB4P13762 266 aa12.81□□□□□ -0.36
CHD1L-203ENST00000369259 LYZP61626 148 aa12.81□□□□□ -0.36
CHD1L-203ENST00000369259 PVRIGQ6DKI7 326 aa12.81□□□□□ -0.36
CHD1L-203ENST00000369259 ZNF418Q8TF45 676 aaPredicted RBP12.81□□□□□ -0.36
CHD1L-203ENST00000369259 TMEM190Q8WZ59 177 aa12.81□□□□□ -0.36
CHD1L-203ENST00000369259 GAFA1Q96PS6 74 aa12.81□□□□□ -0.36
CHD1L-203ENST00000369259 SLC25A39Q9BZJ4 359 aaPredicted RBP12.81□□□□□ -0.36
CHD1L-203ENST00000369259 HLA-DRB4X5D2U9 266 aa12.81□□□□□ -0.36
CHD1L-203ENST00000369259 IGHV3-21A0A0B4J1V1 117 aa12.8□□□□□ -0.36
CHD1L-203ENST00000369259 IGLV2-23P01705 113 aa12.8□□□□□ -0.36
CHD1L-203ENST00000369259 TAL2Q16559 108 aa12.8□□□□□ -0.36
CHD1L-203ENST00000369259 KLF17Q5JT82 389 aaPredicted RBP12.8□□□□□ -0.36
CHD1L-203ENST00000369259 GTSCR1Q86UQ5 136 aa12.8□□□□□ -0.36
CHD1L-203ENST00000369259 CNEP1R1Q8N9A8 125 aa12.8□□□□□ -0.36
CHD1L-203ENST00000369259 C1orf162Q8NEQ5 155 aaPredicted RBP12.8□□□□□ -0.36
CHD1L-203ENST00000369259 C20orf78Q9BR46 151 aa12.8□□□□□ -0.36
CHD1L-203ENST00000369259 C8orf86Q6ZUL3 223 aa12.8□□□□□ -0.36
CHD1L-203ENST00000369259 MDS2Q8NDY4 140 aa12.8□□□□□ -0.36
CHD1L-203ENST00000369259 DEFB108BQ8NET1 73 aa12.8□□□□□ -0.36
CHD1L-203ENST00000369259 CCL13Q99616 98 aa12.8□□□□□ -0.36
CHD1L-203ENST00000369259 A0A1B0GWB2 263 aa12.79□□□□□ -0.36
CHD1L-203ENST00000369259 SPRY3O43610 288 aa12.79□□□□□ -0.36
CHD1L-203ENST00000369259 CFIP05156 583 aa12.79□□□□□ -0.36
CHD1L-203ENST00000369259 THBDP07204 575 aa12.79□□□□□ -0.36
CHD1L-203ENST00000369259 PRSS1P07477 247 aa12.79□□□□□ -0.36
CHD1L-203ENST00000369259 CYSLTR1Q9Y271 337 aa12.79□□□□□ -0.36
CHD1L-203ENST00000369259 LINC00312Q9Y6C7 94 aa12.79□□□□□ -0.36
CHD1L-203ENST00000369259 DSCAMO60469 2012 aa12.79□□□□□ -0.36
CHD1L-203ENST00000369259 TRBV19A0A075B6N1 114 aa12.79□□□□□ -0.36
CHD1L-203ENST00000369259 TMSB15BA0A087X1C1 80 aa12.79□□□□□ -0.36
CHD1L-203ENST00000369259 APOMO95445 188 aa12.79□□□□□ -0.36
CHD1L-203ENST00000369259 RRN3P1Q2M238 152 aa12.79□□□□□ -0.36
CHD1L-203ENST00000369259 FAM216BQ8N7L0 139 aa12.79□□□□□ -0.36
CHD1L-203ENST00000369259 LEPP41159 167 aa12.78□□□□□ -0.36
CHD1L-203ENST00000369259 SRSF6Q13247 344 aaKnown RBP12.78□□□□□ -0.36
CHD1L-203ENST00000369259 ZC2HC1BQ5TFG8 222 aa12.78□□□□□ -0.36
CHD1L-203ENST00000369259 C8orf49Q96NF6 230 aa12.78□□□□□ -0.36
CHD1L-203ENST00000369259 RNF7Q9UBF6 113 aa12.78□□□□□ -0.36
CHD1L-203ENST00000369259 TANC2Q9HCD6 1990 aa12.78□□□□□ -0.36
CHD1L-203ENST00000369259 DPM2O94777 84 aa12.78□□□□□ -0.36
CHD1L-203ENST00000369259 FCER1GP30273 86 aa12.78□□□□□ -0.36
CHD1L-203ENST00000369259 VMA21Q3ZAQ7 101 aa12.78□□□□□ -0.36
CHD1L-203ENST00000369259 TPSG1Q9NRR2 321 aa12.78□□□□□ -0.36
CHD1L-203ENST00000369259 LINC01546A6NGU7 62 aa12.77□□□□□ -0.36
CHD1L-203ENST00000369259 PRRG2O14669 202 aa12.77□□□□□ -0.36
CHD1L-203ENST00000369259 SPINK8P0C7L1 97 aa12.77□□□□□ -0.36
CHD1L-203ENST00000369259 PRB4P10163 310 aaPredicted RBP12.77□□□□□ -0.36
CHD1L-203ENST00000369259 FOXI1Q12951 378 aa12.77□□□□□ -0.36
CHD1L-203ENST00000369259 C17orf77Q96MU5 243 aa12.77□□□□□ -0.36
CHD1L-203ENST00000369259 CDIP1Q9H305 208 aa12.77□□□□□ -0.36
CHD1L-203ENST00000369259 NGBQ9NPG2 151 aa12.77□□□□□ -0.36
CHD1L-203ENST00000369259 CEP290O15078 2479 aa12.77□□□□□ -0.37
CHD1L-203ENST00000369259 TSPAN13O95857 204 aa12.77□□□□□ -0.37
CHD1L-203ENST00000369259 KLRD1Q13241 179 aa12.77□□□□□ -0.37
CHD1L-203ENST00000369259 SIGLEC15Q6ZMC9 328 aa12.77□□□□□ -0.37
CHD1L-203ENST00000369259 SYT8Q8NBV8 401 aa12.77□□□□□ -0.37
CHD1L-203ENST00000369259 MAP1LC3AQ9H492 121 aa12.77□□□□□ -0.37
CHD1L-203ENST00000369259 ARFGEF3Q5TH69 2177 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 C5orf64Q2M2E5 130 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 LINC01559Q495D7 138 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 LYPD1Q8N2G4 141 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 FOXC2Q99958 501 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 DKK4Q9UBT3 224 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 CELSR3Q9NYQ7 3312 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 DIAPH2-AS1Q14236 149 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 TWIST1Q15672 202 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 MRGPRG-AS1Q2M3A8 158 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 MAPKAPK5-AS1Q8N8E1 139 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 ATP6V0E2Q8NHE4 81 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 SCNM1Q9BWG6 230 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 C1QTNF4Q9BXJ3 329 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 TMEM133Q9H2Q1 129 aa12.76□□□□□ -0.37
CHD1L-203ENST00000369259 COLQQ9Y215 455 aaPredicted RBP12.76□□□□□ -0.37
CHD1L-203ENST00000369259 PRUNE2Q8WUY3 3088 aa12.75□□□□□ -0.37
CHD1L-203ENST00000369259 TMEM8BA6NDV4 472 aa12.75□□□□□ -0.37
CHD1L-203ENST00000369259 ATP5LO75964 103 aa12.75□□□□□ -0.37
CHD1L-203ENST00000369259 CCL11P51671 97 aa12.75□□□□□ -0.37
CHD1L-203ENST00000369259 SH2D1AO60880 128 aa12.74□□□□□ -0.37
CHD1L-203ENST00000369259 GATA4P43694 442 aa12.74□□□□□ -0.37
CHD1L-203ENST00000369259 TMEM178AQ8NBL3 297 aa12.74□□□□□ -0.37
CHD1L-203ENST00000369259 HIST1H4GQ99525 98 aa12.74□□□□□ -0.37
CHD1L-203ENST00000369259 OR11H12B2RN74 326 aa12.74□□□□□ -0.37
CHD1L-203ENST00000369259 APELAP0DMC3 54 aa12.74□□□□□ -0.37
CHD1L-203ENST00000369259 PMS2CLQ68D20 193 aa12.74□□□□□ -0.37
CHD1L-203ENST00000369259 Q6ZS92 163 aa12.74□□□□□ -0.37
CHD1L-203ENST00000369259 OR11H1Q8NG94 326 aa12.74□□□□□ -0.37
CHD1L-203ENST00000369259 OR11H2Q8NH07 326 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms