RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 PRNTQ86SH4 94 aa14.24□□□□□ -0.13
PDLIM7-203ENST00000359895 BCL6BQ8N143 479 aaPredicted RBP14.24□□□□□ -0.13
PDLIM7-203ENST00000359895 OR4B1Q8NGF8 309 aa14.24□□□□□ -0.13
PDLIM7-203ENST00000359895 SH2D7A6NKC9 451 aaPredicted RBP14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 FAM223BA6NKX1 122 aa14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 DIRC3C9JPN6 131 aa14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 M0QZK8 103 aa14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 ZNF253O75346 499 aa14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 CLEC3BP05452 202 aa14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 RAB4BP61018 213 aa14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 SLC35B1P78383 322 aa14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 Q0VG73 95 aa14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 PSG3Q16557 428 aa14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 ATP5L2Q7Z4Y8 100 aa14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 FAM223AQ8IWN6 122 aa14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 NUP35Q8NFH5 326 aa14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 GFRA4Q9GZZ7 299 aa14.23□□□□□ -0.13
PDLIM7-203ENST00000359895 FRMD6-AS1P0C7T7 363 aa14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 ATP5G2Q06055 141 aa14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 TOMM20LQ6UXN7 152 aa14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 NEU1Q99519 415 aa14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 GSN-AS1Q9NRJ2 163 aa14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 HIF1ANQ9NWT6 349 aa14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 SOX21Q9Y651 276 aaPredicted RBP14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 HECTD1Q9ULT8 2610 aa14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 TRAV8-1A0A0A6YYK1 113 aa14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 FAM231BA6NCW3 169 aa14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 A6NDX4 124 aa14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 FBLL1A6NHQ2 334 aaKnown RBP14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 RELQ04864 619 aaPredicted RBP14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 CCDC140Q96MF4 163 aa14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 ZFAND3Q9H8U3 227 aa14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 PSG8Q9UQ74 426 aa14.22□□□□□ -0.13
PDLIM7-203ENST00000359895 HIGD1CA8MV81 97 aa14.21□□□□□ -0.14
PDLIM7-203ENST00000359895 NPIPB6E9PJ23 425 aa14.21□□□□□ -0.14
PDLIM7-203ENST00000359895 BRI3O95415 125 aa14.21□□□□□ -0.14
PDLIM7-203ENST00000359895 ESDP10768 282 aa14.21□□□□□ -0.14
PDLIM7-203ENST00000359895 JOSD1Q15040 202 aaPredicted RBP14.21□□□□□ -0.14
PDLIM7-203ENST00000359895 CLEC19AQ6UXS0 136 aa14.21□□□□□ -0.14
PDLIM7-203ENST00000359895 LINC00322Q6ZN03 302 aaPredicted RBP14.21□□□□□ -0.14
PDLIM7-203ENST00000359895 GNB4Q9HAV0 340 aa14.21□□□□□ -0.14
PDLIM7-203ENST00000359895 GRIFINA4D1Z8 144 aa14.2□□□□□ -0.14
PDLIM7-203ENST00000359895 H3BUX3 64 aa14.2□□□□□ -0.14
PDLIM7-203ENST00000359895 APCSP02743 223 aa14.2□□□□□ -0.14
PDLIM7-203ENST00000359895 IGF1P05019 195 aa14.2□□□□□ -0.14
PDLIM7-203ENST00000359895 COL8A1P27658 744 aa14.2□□□□□ -0.14
PDLIM7-203ENST00000359895 OR10J3Q5JRS4 329 aa14.2□□□□□ -0.14
PDLIM7-203ENST00000359895 TMEM256Q8N2U0 113 aa14.2□□□□□ -0.14
PDLIM7-203ENST00000359895 CIARTQ8N365 385 aaPredicted RBP14.2□□□□□ -0.14
PDLIM7-203ENST00000359895 LINC01356Q8N9X3 169 aa14.2□□□□□ -0.14
PDLIM7-203ENST00000359895 OR5R1Q8NH85 324 aa14.2□□□□□ -0.14
PDLIM7-203ENST00000359895 MS4A10Q96PG2 267 aa14.2□□□□□ -0.14
PDLIM7-203ENST00000359895 H3BUA1 57 aa14.19□□□□□ -0.14
PDLIM7-203ENST00000359895 PAFAH1B2P68402 229 aa14.19□□□□□ -0.14
PDLIM7-203ENST00000359895 C9orf152Q5JTZ5 239 aa14.19□□□□□ -0.14
PDLIM7-203ENST00000359895 NRGNQ92686 78 aa14.19□□□□□ -0.14
PDLIM7-203ENST00000359895 A0A087X0K7 114 aa14.18□□□□□ -0.14
PDLIM7-203ENST00000359895 J3QLI3 93 aa14.18□□□□□ -0.14
PDLIM7-203ENST00000359895 IGHG2P01859 326 aa14.18□□□□□ -0.14
PDLIM7-203ENST00000359895 C1orf194Q5T5A4 169 aa14.18□□□□□ -0.14
PDLIM7-203ENST00000359895 C16orf54Q6UWD8 224 aa14.18□□□□□ -0.14
PDLIM7-203ENST00000359895 BAGE3Q86Y29 109 aa14.18□□□□□ -0.14
PDLIM7-203ENST00000359895 PSMG3-AS1Q96PY0 264 aa14.18□□□□□ -0.14
PDLIM7-203ENST00000359895 M0R3E3 92 aa14.17□□□□□ -0.14
PDLIM7-203ENST00000359895 TPPP2P59282 170 aa14.17□□□□□ -0.14
PDLIM7-203ENST00000359895 LY6EQ16553 131 aa14.17□□□□□ -0.14
PDLIM7-203ENST00000359895 RBPMS2Q6ZRY4 209 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-203ENST00000359895 SMAD5-AS1Q9Y6J3 95 aa14.17□□□□□ -0.14
PDLIM7-203ENST00000359895 NBPF19A0A087WUL8 3843 aa14.17□□□□□ -0.14
PDLIM7-203ENST00000359895 A0A1B0GXF2 115 aa14.17□□□□□ -0.14
PDLIM7-203ENST00000359895 BUB3O43684 328 aa14.17□□□□□ -0.14
PDLIM7-203ENST00000359895 TRGV3P03979 118 aa14.17□□□□□ -0.14
PDLIM7-203ENST00000359895 ZC2HC1AQ96GY0 325 aa14.17□□□□□ -0.14
PDLIM7-203ENST00000359895 METTL26Q96S19 204 aa14.17□□□□□ -0.14
PDLIM7-203ENST00000359895 TP53TG3Q9ULZ0 132 aa14.17□□□□□ -0.14
PDLIM7-203ENST00000359895 IGHV3-35A0A0C4DH35 117 aa14.16□□□□□ -0.14
PDLIM7-203ENST00000359895 A0A1B0GUS0 222 aa14.16□□□□□ -0.14
PDLIM7-203ENST00000359895 HBBP68871 147 aa14.16□□□□□ -0.14
PDLIM7-203ENST00000359895 HIST2H2BCQ6DN03 193 aa14.16□□□□□ -0.14
PDLIM7-203ENST00000359895 TCF24Q7RTU0 167 aa14.16□□□□□ -0.14
PDLIM7-203ENST00000359895 OR2D3Q8NGH3 330 aa14.16□□□□□ -0.14
PDLIM7-203ENST00000359895 A0A096LNT2 108 aa14.15□□□□□ -0.14
PDLIM7-203ENST00000359895 ZNF785A8K8V0 405 aa14.15□□□□□ -0.14
PDLIM7-203ENST00000359895 SERF1AO75920 110 aa14.15□□□□□ -0.14
PDLIM7-203ENST00000359895 CT45A10P0DMU9 189 aa14.15□□□□□ -0.14
PDLIM7-203ENST00000359895 SAPCD1Q5SSQ6 148 aa14.15□□□□□ -0.14
PDLIM7-203ENST00000359895 USMG5Q96IX5 58 aa14.15□□□□□ -0.14
PDLIM7-203ENST00000359895 NOL4LQ96MY1 436 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-203ENST00000359895 SLC50A1Q9BRV3 221 aa14.15□□□□□ -0.14
PDLIM7-203ENST00000359895 CRYBG3Q68DQ2 2970 aa14.15□□□□□ -0.14
PDLIM7-203ENST00000359895 CLPSL1A2RUU4 121 aa14.14□□□□□ -0.15
PDLIM7-203ENST00000359895 NUPR1O60356 82 aa14.14□□□□□ -0.15
PDLIM7-203ENST00000359895 AVPP01185 164 aa14.14□□□□□ -0.15
PDLIM7-203ENST00000359895 GZMBP10144 247 aa14.14□□□□□ -0.15
PDLIM7-203ENST00000359895 SRIP30626 198 aa14.14□□□□□ -0.15
PDLIM7-203ENST00000359895 KIAA1644Q3SXP7 199 aa14.14□□□□□ -0.15
PDLIM7-203ENST00000359895 COX8CQ7Z4L0 72 aa14.14□□□□□ -0.15
PDLIM7-203ENST00000359895 GTSF1Q8WW33 167 aa14.14□□□□□ -0.15
PDLIM7-203ENST00000359895 IGHV3OR16-8A0A075B7F1 116 aa14.13□□□□□ -0.15
PDLIM7-203ENST00000359895 CHEK1O14757 476 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms