RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 KLRD1Q13241 179 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 AMTNQ6UX39 209 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 COL4A1P02462 1669 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 CD28P10747 220 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 TTTY12Q9BZ98 90 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 ZNF581Q9P0T4 197 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 TEX48A0A1B0GUV7 120 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 TDRG1Q3Y452 100 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 C21orf62Q9NYP8 219 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 TDHQ8IZJ6 230 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 PRCDQ00LT1 54 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 PAX1P15863 534 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 C8orf86Q6ZUL3 223 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 DEFB109BQ30KR1 87 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 C12orf74Q32Q52 190 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 Q6ZS52 159 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 PLAURQ03405 335 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 CHCHD2P9Q5T1J5 151 aaPredicted RBP5□□□□□ -1.61
VPS13B-203ENST00000358544 FAM90A1Q86YD7 464 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 CYYR1Q96J86 154 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 H3BMM0 161 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 IGKV1D-33P01593 117 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 IGKV1-33P01594 117 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 INAFM2P0DMQ5 153 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 EBLN2Q6P2I7 272 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 C15orf53Q8NAA6 179 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 UBE2WQ96B02 151 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 HES7Q9BYE0 225 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 ADAMTS20P59510 1910 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 TEX15Q9BXT5 2789 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 GGTLC3B5MD39 225 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 C22orf46C9J442 243 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 SH2D1AO60880 128 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 LGALS1P09382 135 aaKnown RBP4.99□□□□□ -1.61
VPS13B-203ENST00000358544 Q6ZRM9 215 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 OR11H6Q8NGC7 330 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 ATP5G2Q06055 141 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 RAX2Q96IS3 184 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 C1orf147Q96MC9 270 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-203ENST00000358544 KLF14Q8TD94 323 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-203ENST00000358544 TRGV8A0A0C4DH27 118 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 CNTFRP26992 372 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 CFHR2P36980 270 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 IGLV3-32A0A0A0MS00 114 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 NTF4P34130 210 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 VDAC2P45880 294 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-203ENST00000358544 RNF125Q96EQ8 232 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 SVIPQ8NHG7 77 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 ZNF837Q96EG3 531 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-203ENST00000358544 SMKR1H3BMG3 65 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 TMEM158Q8WZ71 300 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 PAPPA2Q9BXP8 1791 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 MRAPQ8TCY5 172 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 UTF1Q5T230 341 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 LINC01545Q5VT33 79 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 S4R3C0 116 aa4.99□□□□□ -1.61
VPS13B-203ENST00000358544 A0A0G2JRQ6 117 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 H3BMG7 143 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 NPFFO15130 113 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 AMN1Q8IY45 258 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 RNF183Q96D59 192 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 SCRT2Q9NQ03 307 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 IGHV1-45A0A0A0MS14 117 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 FAM104BQ5XKR9 115 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 VWC2Q2TAL6 325 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 PPP1R27Q86WC6 154 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 NDUFS7O75251 213 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 SLC50A1Q9BRV3 221 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 TRAV40A0A0B4J280 105 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 TMEM213A2RRL7 107 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 CHCHD2Q9Y6H1 151 aaPredicted RBP4.98□□□□□ -1.61
VPS13B-203ENST00000358544 TRAV8-3A0A0A6YYJ7 113 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 COL5A3P25940 1745 aaPredicted RBP4.98□□□□□ -1.61
VPS13B-203ENST00000358544 IGKV1-6A0A0C4DH72 117 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 TMEM42Q69YG0 159 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 SHISA5Q8N114 240 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 PRADC1Q9BSG0 188 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 TMEM126AQ9H061 195 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 TRAV3A0A0B4J244 114 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 MYMXA0A1B0GTQ4 84 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 FABP5P3A8MUU1 101 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 GFRA3O60609 400 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 CD3EP07766 207 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 ARMS2P0C7Q2 107 aa4.98□□□□□ -1.61
VPS13B-203ENST00000358544 Q8N8P6 123 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 PAX9P55771 341 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 ETV2O00321 342 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-203ENST00000358544 LGALS9BQ3B8N2 356 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 TMEM240Q5SV17 173 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 LGALS9CQ6DKI2 356 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 SIGLEC8Q9NYZ4 499 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 PRSS29PA6NIE9 313 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 C8orf46Q8TAG6 207 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 K7EN84 100 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 TCF15Q12870 199 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 CITED2Q99967 270 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-203ENST00000358544 C2CD4DB7Z1M9 353 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 SLC22A18ASQ8N1D0 253 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 IQCF6A8MYZ5 107 aa4.97□□□□□ -1.61
VPS13B-203ENST00000358544 SLC25A20O43772 301 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms