RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 ZNF429Q86V71 674 aa3.97□□□□□ -1.77
VCAM1-202ENST00000347652 C2orf50Q96LR7 162 aa3.97□□□□□ -1.77
VCAM1-202ENST00000347652 NIT2Q9NQR4 276 aa3.97□□□□□ -1.77
VCAM1-202ENST00000347652 BIN3Q9NQY0 253 aa3.97□□□□□ -1.77
VCAM1-202ENST00000347652 PLA2G2EQ9NZK7 142 aa3.97□□□□□ -1.77
VCAM1-202ENST00000347652 CACNG5Q9UF02 275 aa3.97□□□□□ -1.77
VCAM1-202ENST00000347652 A0A0G2JLM5 398 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 TEX50A0A1B0GTY4 177 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 SNAPC5O75971 98 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 CA2P00918 260 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 CXCL2P19875 107 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 H2BFSP57053 126 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 GNG5P63218 68 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 IL15RAQ13261 267 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 IAH1Q2TAA2 248 aaPredicted RBP3.96□□□□□ -1.78
VCAM1-202ENST00000347652 KRTAP21-3Q3LHN1 58 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 TMEM97Q5BJF2 176 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 ASB13Q8WXK3 278 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 SPIN2AQ99865 258 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 SPIN2BQ9BPZ2 258 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 NMES1Q9C002 83 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 FKBP11Q9NYL4 201 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 PRNDQ9UKY0 176 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 IGHV7-81A0A0B4J1V7 117 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 MAP1LC3B2A6NCE7 125 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 DIRC3C9JPN6 131 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 PPP5D1E7EU14 171 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 MRPS12O15235 138 aaKnown RBP3.96□□□□□ -1.78
VCAM1-202ENST00000347652 TRAPPC2P0DI81 140 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 TRAPPC2BP0DI82 140 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 TSPOP30536 169 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 BLCAPP62952 87 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 C15orf54Q8N8G6 183 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 OR51G1Q8NGK1 321 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 OR1N2Q8NGR9 330 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 OR4X1Q8NH49 305 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 OR1S1Q8NH92 325 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 HSPB9Q9BQS6 159 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 ZNF436Q9C0F3 470 aaPredicted RBP3.96□□□□□ -1.78
VCAM1-202ENST00000347652 MAP1LC3BQ9GZQ8 125 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 NDUFA4L2Q9NRX3 87 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 ZNF257Q9Y2Q1 563 aa3.96□□□□□ -1.78
VCAM1-202ENST00000347652 FAM181BA6NEQ2 426 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 E7EUB6 86 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 TSPAN15O95858 294 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 IGHG2P01859 326 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 EGR2P11161 476 aaPredicted RBP3.95□□□□□ -1.78
VCAM1-202ENST00000347652 HSPE1P61604 102 aaKnown RBP3.95□□□□□ -1.78
VCAM1-202ENST00000347652 GNB1P62873 340 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 CACNG7P62955 275 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 CYCSP99999 105 aaKnown RBP3.95□□□□□ -1.78
VCAM1-202ENST00000347652 NSUN5P1Q3KNT7 163 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 GINS3Q9BRX5 216 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 CARHSP1Q9Y2V2 147 aaKnown RBP3.95□□□□□ -1.78
VCAM1-202ENST00000347652 A0A1B0GW64 132 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 LINC01548A6NM66 108 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 SMIM6P0DI80 62 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 GPR183P32249 361 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 NDPQ00604 133 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 PRCDQ00LT1 54 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 FXYD3Q14802 87 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 C10orf55Q5SWW7 151 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 Q8N2B8 174 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 SRSF12Q8WXF0 261 aaKnown RBP3.95□□□□□ -1.78
VCAM1-202ENST00000347652 TMEM158Q8WZ71 300 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 PDCD10Q9BUL8 212 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 COMMD5Q9GZQ3 224 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 ZNF702PQ9H963 129 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 CACFD1Q9UGQ2 172 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 PAM16Q9Y3D7 125 aa3.95□□□□□ -1.78
VCAM1-202ENST00000347652 MSGN1A6NI15 193 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 INS-IGF2F8WCM5 200 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 GNG7O60262 68 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 IFNA17P01571 189 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 RPL27AP46776 148 aaKnown RBP3.94□□□□□ -1.78
VCAM1-202ENST00000347652 CRIP2P52943 208 aaPredicted RBP3.94□□□□□ -1.78
VCAM1-202ENST00000347652 RHOBP62745 196 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 FAM106AQ4KMX7 169 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 SGMS2Q8NHU3 365 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 FBXO7Q9Y3I1 522 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 ZNF705EA8MWA4 302 aaPredicted RBP3.94□□□□□ -1.78
VCAM1-202ENST00000347652 K7EPK0 472 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 HMGB3O15347 200 aaKnown RBP3.94□□□□□ -1.78
VCAM1-202ENST00000347652 PFN1P07737 140 aaKnown RBP3.94□□□□□ -1.78
VCAM1-202ENST00000347652 MDKP21741 143 aaPredicted RBP3.94□□□□□ -1.78
VCAM1-202ENST00000347652 VDAC2P45880 294 aaPredicted RBP3.94□□□□□ -1.78
VCAM1-202ENST00000347652 CLINT1Q14677 625 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 SPINK9Q5DT21 86 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 SLC35E3Q7Z769 313 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 ST6GAL2Q96JF0 529 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 FAM103A1Q9BTL3 118 aaKnown RBP3.94□□□□□ -1.78
VCAM1-202ENST00000347652 C11orf1Q9H5F2 150 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 C16orf95Q9H693 158 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 SPANXB1Q9NS25 103 aaPredicted RBP3.94□□□□□ -1.78
VCAM1-202ENST00000347652 DKK2Q9UBU2 259 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 ZNF580Q9UK33 172 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 TRAV14DV4A0A0A6YYC5 116 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 IGLC7A0M8Q6 106 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 CEBPZOSA8MTT3 80 aa3.94□□□□□ -1.78
VCAM1-202ENST00000347652 ATP6V0E1O15342 81 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms