RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 RPL7P18124 248 aaKnown RBP11.43□□□□□ -0.58
TRA2B-202ENST00000342294 GFI1BQ5VTD9 330 aa11.43□□□□□ -0.58
TRA2B-202ENST00000342294 RPUSD4Q96CM3 377 aaKnown RBP11.43□□□□□ -0.58
TRA2B-202ENST00000342294 Q9H521 79 aa11.43□□□□□ -0.58
TRA2B-202ENST00000342294 PITX3O75364 302 aa11.42□□□□□ -0.58
TRA2B-202ENST00000342294 NCS1P62166 190 aa11.42□□□□□ -0.58
TRA2B-202ENST00000342294 PARD6GQ9BYG4 376 aaPredicted RBP11.42□□□□□ -0.58
TRA2B-202ENST00000342294 KCNIP3Q9Y2W7 256 aa11.42□□□□□ -0.58
TRA2B-202ENST00000342294 HMCN2Q8NDA2 5059 aa11.42□□□□□ -0.58
TRA2B-202ENST00000342294 AKR1C4P17516 323 aa11.41□□□□□ -0.58
TRA2B-202ENST00000342294 IAPPP10997 89 aa11.4□□□□□ -0.58
TRA2B-202ENST00000342294 SSBP1Q04837 148 aaKnown RBP11.4□□□□□ -0.58
TRA2B-202ENST00000342294 MSRB1Q9NZV6 116 aa11.4□□□□□ -0.58
TRA2B-202ENST00000342294 EXTL2Q9UBQ6 330 aa11.4□□□□□ -0.58
TRA2B-202ENST00000342294 ICOSQ9Y6W8 199 aa11.4□□□□□ -0.58
TRA2B-202ENST00000342294 TRAV9-2A0A087WT02 112 aa11.39□□□□□ -0.59
TRA2B-202ENST00000342294 DISC1C4P0D8 188 aa11.39□□□□□ -0.59
TRA2B-202ENST00000342294 MRPS12O15235 138 aaKnown RBP11.39□□□□□ -0.59
TRA2B-202ENST00000342294 ZNF324O75467 553 aaPredicted RBP11.39□□□□□ -0.59
TRA2B-202ENST00000342294 PLP1P60201 277 aa11.39□□□□□ -0.59
TRA2B-202ENST00000342294 LYPD5Q6UWN5 251 aa11.39□□□□□ -0.59
TRA2B-202ENST00000342294 SYT8Q8NBV8 401 aa11.39□□□□□ -0.59
TRA2B-202ENST00000342294 LRRC20Q8TCA0 184 aa11.39□□□□□ -0.59
TRA2B-202ENST00000342294 C15orf40Q8WUR7 153 aa11.39□□□□□ -0.59
TRA2B-202ENST00000342294 LINC00467Q9BRT7 94 aa11.39□□□□□ -0.59
TRA2B-202ENST00000342294 FAM30AQ9NZY2 134 aa11.39□□□□□ -0.59
TRA2B-202ENST00000342294 PAIP2BQ9ULR5 123 aaKnown RBP11.39□□□□□ -0.59
TRA2B-202ENST00000342294 HIGD1AQ9Y241 93 aa11.39□□□□□ -0.59
TRA2B-202ENST00000342294 TRGV2A0A075B6R0 118 aa11.38□□□□□ -0.59
TRA2B-202ENST00000342294 IGLV5-52A0A0A0MRZ9 124 aa11.38□□□□□ -0.59
TRA2B-202ENST00000342294 K7EP13 123 aa11.38□□□□□ -0.59
TRA2B-202ENST00000342294 RAP2BP61225 183 aa11.38□□□□□ -0.59
TRA2B-202ENST00000342294 VBP1P61758 197 aa11.38□□□□□ -0.59
TRA2B-202ENST00000342294 MZT2AQ6P582 158 aa11.38□□□□□ -0.59
TRA2B-202ENST00000342294 ACOT7LQ6ZUV0 252 aa11.38□□□□□ -0.59
TRA2B-202ENST00000342294 C11orf72Q8NBR9 251 aa11.38□□□□□ -0.59
TRA2B-202ENST00000342294 PYGO2Q9BRQ0 406 aa11.38□□□□□ -0.59
TRA2B-202ENST00000342294 ZNF331Q9NQX6 463 aaPredicted RBP11.38□□□□□ -0.59
TRA2B-202ENST00000342294 LY96Q9Y6Y9 160 aa11.38□□□□□ -0.59
TRA2B-202ENST00000342294 PRAC2D3DTV9 90 aa11.37□□□□□ -0.59
TRA2B-202ENST00000342294 PAX4O43316 350 aa11.37□□□□□ -0.59
TRA2B-202ENST00000342294 HYPMO75409 117 aa11.37□□□□□ -0.59
TRA2B-202ENST00000342294 PLA2G1BP04054 148 aaKnown RBP11.37□□□□□ -0.59
TRA2B-202ENST00000342294 CYP2G1PQ6ZSU1 146 aa11.37□□□□□ -0.59
TRA2B-202ENST00000342294 OR51S1Q8NGJ8 323 aa11.37□□□□□ -0.59
TRA2B-202ENST00000342294 DEFB104AQ8WTQ1 72 aa11.37□□□□□ -0.59
TRA2B-202ENST00000342294 NTN5Q8WTR8 489 aaPredicted RBP11.37□□□□□ -0.59
TRA2B-202ENST00000342294 FUT9Q9Y231 359 aa11.37□□□□□ -0.59
TRA2B-202ENST00000342294 TRAV12-3A0A0B4J271 114 aa11.36□□□□□ -0.59
TRA2B-202ENST00000342294 LRCOL1A6NCL2 159 aa11.36□□□□□ -0.59
TRA2B-202ENST00000342294 NPIPB6E9PJ23 425 aa11.36□□□□□ -0.59
TRA2B-202ENST00000342294 CXCL2P19875 107 aa11.36□□□□□ -0.59
TRA2B-202ENST00000342294 AKR1C1Q04828 323 aa11.36□□□□□ -0.59
TRA2B-202ENST00000342294 ZBTB8BQ8NAP8 495 aaPredicted RBP11.36□□□□□ -0.59
TRA2B-202ENST00000342294 PRRT1Q99946 306 aa11.36□□□□□ -0.59
TRA2B-202ENST00000342294 GSN-AS1Q9NRJ2 163 aa11.36□□□□□ -0.59
TRA2B-202ENST00000342294 PMS2P5A8MQ11 134 aa11.35□□□□□ -0.59
TRA2B-202ENST00000342294 IL5P05113 134 aa11.35□□□□□ -0.59
TRA2B-202ENST00000342294 AKAIN1P0CW23 69 aa11.35□□□□□ -0.59
TRA2B-202ENST00000342294 SRPXP78539 464 aa11.35□□□□□ -0.59
TRA2B-202ENST00000342294 PATE2Q6UY27 113 aa11.35□□□□□ -0.59
TRA2B-202ENST00000342294 CCDC190Q86UF4 302 aa11.35□□□□□ -0.59
TRA2B-202ENST00000342294 ZNF431Q8TF32 576 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-202ENST00000342294 CIB3Q96Q77 187 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-202ENST00000342294 FUNDC2Q9BWH2 189 aa11.35□□□□□ -0.59
TRA2B-202ENST00000342294 LINC00854A0A1B0GVQ3 168 aa11.34□□□□□ -0.59
TRA2B-202ENST00000342294 C1QBP02746 253 aa11.34□□□□□ -0.59
TRA2B-202ENST00000342294 OR5G3P0C626 314 aa11.34□□□□□ -0.59
TRA2B-202ENST00000342294 LINC00869P0C866 280 aa11.34□□□□□ -0.59
TRA2B-202ENST00000342294 CT45A10P0DMU9 189 aa11.34□□□□□ -0.59
TRA2B-202ENST00000342294 SLC25A6P12236 298 aa11.34□□□□□ -0.59
TRA2B-202ENST00000342294 RPP30P78346 268 aaKnown RBP11.34□□□□□ -0.59
TRA2B-202ENST00000342294 C4orf46Q504U0 113 aa11.34□□□□□ -0.59
TRA2B-202ENST00000342294 LCN15Q6UWW0 184 aa11.34□□□□□ -0.59
TRA2B-202ENST00000342294 WFDC10BQ8IUB3 73 aa11.34□□□□□ -0.59
TRA2B-202ENST00000342294 SMIM4Q8WVI0 70 aa11.34□□□□□ -0.59
TRA2B-202ENST00000342294 ODF3Q96PU9 254 aa11.34□□□□□ -0.59
TRA2B-202ENST00000342294 SLC50A1Q9BRV3 221 aa11.34□□□□□ -0.59
TRA2B-202ENST00000342294 PRO0255Q9UI72 69 aa11.34□□□□□ -0.59
TRA2B-202ENST00000342294 TRGV1A0A0A0MS02 117 aa11.33□□□□□ -0.6
TRA2B-202ENST00000342294 DUXBA0A1W2PPF3 345 aa11.33□□□□□ -0.6
TRA2B-202ENST00000342294 J3KRW8 73 aa11.33□□□□□ -0.6
TRA2B-202ENST00000342294 SYNGR2O43760 224 aa11.33□□□□□ -0.6
TRA2B-202ENST00000342294 SPINK4O60575 86 aa11.33□□□□□ -0.6
TRA2B-202ENST00000342294 MED6O75586 246 aa11.33□□□□□ -0.6
TRA2B-202ENST00000342294 CRYBA4P53673 196 aa11.33□□□□□ -0.6
TRA2B-202ENST00000342294 MRPS10P82664 201 aaKnown RBP11.33□□□□□ -0.6
TRA2B-202ENST00000342294 MRPL23Q16540 153 aaKnown RBP11.33□□□□□ -0.6
TRA2B-202ENST00000342294 TEPPQ6URK8 271 aa11.33□□□□□ -0.6
TRA2B-202ENST00000342294 NEGR1Q7Z3B1 354 aa11.33□□□□□ -0.6
TRA2B-202ENST00000342294 CLVS1Q8IUQ0 354 aaPredicted RBP11.33□□□□□ -0.6
TRA2B-202ENST00000342294 AP3S1Q92572 193 aa11.33□□□□□ -0.6
TRA2B-202ENST00000342294 ST6GAL2Q96JF0 529 aa11.33□□□□□ -0.6
TRA2B-202ENST00000342294 MIXL1Q9H2W2 232 aa11.33□□□□□ -0.6
TRA2B-202ENST00000342294 WRBO00258 174 aa11.32□□□□□ -0.6
TRA2B-202ENST00000342294 ANXA3P12429 323 aa11.32□□□□□ -0.6
TRA2B-202ENST00000342294 EVI2AP22794 236 aa11.32□□□□□ -0.6
TRA2B-202ENST00000342294 LEPP41159 167 aa11.32□□□□□ -0.6
TRA2B-202ENST00000342294 SELENOTP62341 195 aa11.32□□□□□ -0.6
TRA2B-202ENST00000342294 SPANXN5Q5MJ07 72 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms