RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 SMLR1H3BR10 107 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 OR10J4P0C629 311 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 AKR1C3P42330 323 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 CD300EQ496F6 205 aaPredicted RBP3.9□□□□□ -1.79
LRIT3-201ENST00000327908 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 PATE2Q6UY27 113 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 CYB561D1Q8N8Q1 229 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 IL17DQ8TAD2 202 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 TMEM37Q8WXS4 190 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 FMC1Q96HJ9 113 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 SLC25A2Q9BXI2 301 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 ZFP30Q9Y2G7 519 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 GOLT1BQ9Y3E0 138 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 LY96Q9Y6Y9 160 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 COL12A1Q99715 3063 aa3.9□□□□□ -1.79
LRIT3-201ENST00000327908 LOC102724200A0A096LPH7 203 aaPredicted RBP3.89□□□□□ -1.79
LRIT3-201ENST00000327908 RPL19P84098 196 aaKnown RBP3.89□□□□□ -1.79
LRIT3-201ENST00000327908 CLLU1Q5K131 121 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 TEX261Q6UWH6 196 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 MIR17HGQ75NE6 70 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 TMEM61Q8N0U2 210 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 SFT2D1Q8WV19 159 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 FAM167A-AS1Q96KT0 104 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 MDFIQ99750 246 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 ATG101Q9BSB4 218 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 NDUFAF3Q9BU61 184 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 IGHV3-48P01763 117 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 ARL14EPLP0DKL9 152 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 HLA-DRB4P13762 266 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 CD81P60033 236 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 RPS20P60866 119 aaKnown RBP3.89□□□□□ -1.79
LRIT3-201ENST00000327908 C18orf65Q6ZTR6 163 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 TMEM75Q8N9X5 138 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 FXYD5Q96DB9 178 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 HLA-DRB4X5D2U9 266 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 TNCP24821 2201 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 BOLA2-SMG1P6H3BVE0 249 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 RGS13O14921 159 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 MRPS12O15235 138 aaKnown RBP3.89□□□□□ -1.79
LRIT3-201ENST00000327908 CXCL1P09341 107 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 UBE2G1P62253 170 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 IQCF2Q8IXL9 164 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 RPP25LQ8N5L8 163 aaKnown RBP3.89□□□□□ -1.79
LRIT3-201ENST00000327908 C11orf52Q96A22 123 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 LINC00467Q9BRT7 94 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 Q9H3A6 140 aa3.89□□□□□ -1.79
LRIT3-201ENST00000327908 SAV1Q9H4B6 383 aaPredicted RBP3.89□□□□□ -1.79
LRIT3-201ENST00000327908 A0A1B0GVG6 124 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 XKRY2A2RUG3 117 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 NPIPB6E9PJ23 425 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 CT45A10P0DMU9 189 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 BCL2P10415 239 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 IGLL1P15814 213 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 ZNF506Q5JVG8 444 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 C9orf47Q6ZRZ4 202 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 ZNF680Q8NEM1 530 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 LYPD6BQ8NI32 183 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 TMPRSS5Q9H3S3 457 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 MAP6D1Q9H9H5 199 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 HIVEP1P15822 2718 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 SOCS3O14543 225 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 ZNF207O43670 478 aaKnown RBP3.88□□□□□ -1.79
LRIT3-201ENST00000327908 CIDEAO60543 219 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 INSP01308 110 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 SRSF2Q01130 221 aaKnown RBP3.88□□□□□ -1.79
LRIT3-201ENST00000327908 DEFA5Q01523 94 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 OR8A1Q8NGG7 326 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 DCANP1Q8TF63 244 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 BTF3L4Q96K17 158 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 ASCL2Q99929 193 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 BOLA1Q9Y3E2 137 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 ADGRG4Q8IZF6 3080 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 ZNF138P52744 262 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 ZNF493Q6ZR52 646 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 KCNS1Q96KK3 526 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 SPATA25Q9BR10 227 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 ZMAT4Q9H898 229 aa3.88□□□□□ -1.79
LRIT3-201ENST00000327908 GATA2P23769 480 aaPredicted RBP3.87□□□□□ -1.79
LRIT3-201ENST00000327908 Q6ZWC4 215 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 NEU1Q99519 415 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 SH3BGRL3Q9H299 93 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 EPDR1Q9UM22 224 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 NSD1Q96L73 2696 aaPredicted RBP3.87□□□□□ -1.79
LRIT3-201ENST00000327908 A0A0J9YX75 114 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 LOC102723971A0A1B0GUV8 181 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 PGPA6NDG6 321 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 PEX7O00628 323 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 DEFB131AP59861 70 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 MEF2BQ02080 365 aaPredicted RBP3.87□□□□□ -1.79
LRIT3-201ENST00000327908 HIST1H1AQ02539 215 aaPredicted RBP3.87□□□□□ -1.79
LRIT3-201ENST00000327908 PSMG4Q5JS54 123 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 OR4B1Q8NGF8 309 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 LINC00052Q96N35 136 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 DUX3Q96PT4 197 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 SRD5A3Q9H8P0 318 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 ZNF586Q9NXT0 402 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 OTOGQ6ZRI0 2925 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 ASPMQ8IZT6 3477 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 CELSR2Q9HCU4 2923 aa3.87□□□□□ -1.79
LRIT3-201ENST00000327908 TRGV11A0A075B6L2 103 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms