RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 LINC00527Q9UJ94 153 aa11.53□□□□□ -0.56
CLK4-201ENST00000316308 FAM208BQ5VWN6 2430 aa11.53□□□□□ -0.56
CLK4-201ENST00000316308 IGHV3OR16-13A0A075B7E8 117 aa11.53□□□□□ -0.56
CLK4-201ENST00000316308 IGHV3-74A0A0B4J1X5 117 aa11.53□□□□□ -0.56
CLK4-201ENST00000316308 IGHV2-70DA0A0C4DH43 119 aa11.53□□□□□ -0.56
CLK4-201ENST00000316308 TMEM219Q86XT9 240 aa11.53□□□□□ -0.56
CLK4-201ENST00000316308 TTC9CQ8N5M4 171 aa11.53□□□□□ -0.56
CLK4-201ENST00000316308 SIGLECL1Q8N7X8 197 aa11.53□□□□□ -0.56
CLK4-201ENST00000316308 KCNS1Q96KK3 526 aa11.53□□□□□ -0.56
CLK4-201ENST00000316308 C21orf62Q9NYP8 219 aa11.53□□□□□ -0.56
CLK4-201ENST00000316308 NPIPB5A8MRT5 1133 aa11.52□□□□□ -0.56
CLK4-201ENST00000316308 RNF224P0DH78 156 aa11.52□□□□□ -0.56
CLK4-201ENST00000316308 COL8A1P27658 744 aa11.52□□□□□ -0.56
CLK4-201ENST00000316308 EFNA4P52798 201 aa11.52□□□□□ -0.56
CLK4-201ENST00000316308 PAFAH1B2P68402 229 aa11.52□□□□□ -0.56
CLK4-201ENST00000316308 TMUB1Q9BVT8 246 aa11.52□□□□□ -0.56
CLK4-201ENST00000316308 IGHV3-66A0A0C4DH42 116 aa11.52□□□□□ -0.57
CLK4-201ENST00000316308 IGHV4-39P01824 125 aa11.52□□□□□ -0.57
CLK4-201ENST00000316308 OR10J3Q5JRS4 329 aa11.52□□□□□ -0.57
CLK4-201ENST00000316308 LCN12Q6JVE5 192 aa11.52□□□□□ -0.57
CLK4-201ENST00000316308 SRSF8Q9BRL6 282 aaKnown RBP11.52□□□□□ -0.57
CLK4-201ENST00000316308 ALKBH7Q9BT30 221 aaPredicted RBP11.52□□□□□ -0.57
CLK4-201ENST00000316308 ATP6V0E1O15342 81 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 MFAP4P55083 255 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 EBI3Q14213 229 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 MAJINQ3KP22 176 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 C1orf122Q6ZSJ8 110 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 ATOH7Q8N100 152 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 WIPF2Q8TF74 440 aaPredicted RBP11.51□□□□□ -0.57
CLK4-201ENST00000316308 NDUFAF3Q9BU61 184 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 C1RLQ9NZP8 487 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 MUC21A0A0G2JKD1 596 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 MUC21A0A140T8X8 626 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 ZNF324O75467 553 aaPredicted RBP11.51□□□□□ -0.57
CLK4-201ENST00000316308 ZNF138P52744 262 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 MUC21Q5SSG8 566 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 C1orf194Q5T5A4 169 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 BRD3OSQ6XYD6 125 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 OR4F17Q8NGA8 305 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 SMAD5-AS1Q9Y6J3 95 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 LRRK2Q5S007 2527 aa11.51□□□□□ -0.57
CLK4-201ENST00000316308 IGKV2-40A0A087WW87 121 aaPredicted RBP11.5□□□□□ -0.57
CLK4-201ENST00000316308 IGKV2D-40P01614 121 aaPredicted RBP11.5□□□□□ -0.57
CLK4-201ENST00000316308 GPR183P32249 361 aa11.5□□□□□ -0.57
CLK4-201ENST00000316308 CUBNO60494 3623 aa11.5□□□□□ -0.57
CLK4-201ENST00000316308 TMSB15BA0A087X1C1 80 aa11.5□□□□□ -0.57
CLK4-201ENST00000316308 IGHV3-49A0A0A0MS15 119 aa11.5□□□□□ -0.57
CLK4-201ENST00000316308 CCDC144NLQ6NUI1 221 aa11.5□□□□□ -0.57
CLK4-201ENST00000316308 DAZAP1Q96EP5 407 aaKnown RBP11.5□□□□□ -0.57
CLK4-201ENST00000316308 PSG8Q9UQ74 426 aa11.5□□□□□ -0.57
CLK4-201ENST00000316308 KIR2DL5BA0A0G2JN68 375 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 KIR2DL5BA0A0G2JPC4 375 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 DIRC3C9JPN6 131 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 C3orf79P0CE67 100 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 C15orf32Q32M92 178 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 TEX43Q6ZNM6 134 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 SPATA12Q7Z6I5 190 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 KIR2DL5AQ8N109 375 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 Q8TAT8 98 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 USP24Q9UPU5 2620 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 CENPVL3A0A0U1RRI6 287 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 IGHG4P01861 327 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 APOHP02749 345 aaPredicted RBP11.49□□□□□ -0.57
CLK4-201ENST00000316308 RNASEKQ6P5S7 137 aaKnown RBP11.49□□□□□ -0.57
CLK4-201ENST00000316308 UNQ5815/PRO19632Q6UWF5 114 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 TPPP3Q9BW30 176 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 ZNF462Q96JM2 2506 aa11.49□□□□□ -0.57
CLK4-201ENST00000316308 A8MWL6 223 aa11.48□□□□□ -0.57
CLK4-201ENST00000316308 NPIPB6E9PJ23 425 aa11.48□□□□□ -0.57
CLK4-201ENST00000316308 ARMS2P0C7Q2 107 aa11.48□□□□□ -0.57
CLK4-201ENST00000316308 UBE2E1P51965 193 aa11.48□□□□□ -0.57
CLK4-201ENST00000316308 MINOS1Q5TGZ0 78 aa11.48□□□□□ -0.57
CLK4-201ENST00000316308 NRGNQ92686 78 aa11.48□□□□□ -0.57
CLK4-201ENST00000316308 SNHG12Q9BXW3 62 aa11.48□□□□□ -0.57
CLK4-201ENST00000316308 ZNF492Q9P255 531 aa11.48□□□□□ -0.57
CLK4-201ENST00000316308 MINOS1-NBL1R4GNA1 71 aa11.48□□□□□ -0.57
CLK4-201ENST00000316308 ZNF207O43670 478 aaKnown RBP11.48□□□□□ -0.57
CLK4-201ENST00000316308 HBBP68871 147 aa11.48□□□□□ -0.57
CLK4-201ENST00000316308 PSG3Q16557 428 aa11.48□□□□□ -0.57
CLK4-201ENST00000316308 LINC00173Q6ZV60 143 aa11.48□□□□□ -0.57
CLK4-201ENST00000316308 CLEC3BP05452 202 aa11.47□□□□□ -0.57
CLK4-201ENST00000316308 EBLN2Q6P2I7 272 aa11.47□□□□□ -0.57
CLK4-201ENST00000316308 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
CLK4-201ENST00000316308 IGHV4-61A0A0C4DH41 118 aa11.47□□□□□ -0.57
CLK4-201ENST00000316308 FAM106CPP0CH98 169 aa11.47□□□□□ -0.57
CLK4-201ENST00000316308 VGLL1Q99990 258 aa11.47□□□□□ -0.57
CLK4-201ENST00000316308 ZNF469Q96JG9 3925 aaPredicted RBP11.46□□□□□ -0.57
CLK4-201ENST00000316308 RHOGP84095 191 aa11.46□□□□□ -0.57
CLK4-201ENST00000316308 COX19Q49B96 90 aa11.46□□□□□ -0.57
CLK4-201ENST00000316308 RBPMS2Q6ZRY4 209 aaKnown RBP11.46□□□□□ -0.57
CLK4-201ENST00000316308 SMIM12Q96EX1 92 aa11.46□□□□□ -0.57
CLK4-201ENST00000316308 NBPF19A0A087WUL8 3843 aa11.46□□□□□ -0.58
CLK4-201ENST00000316308 LURAP1LQ8IV03 231 aa11.46□□□□□ -0.58
CLK4-201ENST00000316308 RNF182Q8N6D2 247 aa11.46□□□□□ -0.58
CLK4-201ENST00000316308 CCDC140Q96MF4 163 aa11.46□□□□□ -0.58
CLK4-201ENST00000316308 TP73-AS1Q9UF72 201 aa11.46□□□□□ -0.58
CLK4-201ENST00000316308 ABCA12Q86UK0 2595 aa11.46□□□□□ -0.58
CLK4-201ENST00000316308 PRAC2D3DTV9 90 aa11.45□□□□□ -0.58
CLK4-201ENST00000316308 NPFFO15130 113 aa11.45□□□□□ -0.58
CLK4-201ENST00000316308 ZNF80P51504 273 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms