RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 DEFB130AP0DP74 79 aa12.27□□□□□ -0.45
EXOSC4-201ENST00000316052 PRB4P10163 310 aaPredicted RBP12.27□□□□□ -0.45
EXOSC4-201ENST00000316052 SOHLH1Q5JUK2 328 aa12.27□□□□□ -0.45
EXOSC4-201ENST00000316052 C15orf53Q8NAA6 179 aa12.27□□□□□ -0.45
EXOSC4-201ENST00000316052 ZNF738Q8NE65 137 aa12.27□□□□□ -0.45
EXOSC4-201ENST00000316052 KRTAP4-5Q9BYR2 181 aa12.27□□□□□ -0.45
EXOSC4-201ENST00000316052 SMCO3A2RU48 225 aa12.26□□□□□ -0.45
EXOSC4-201ENST00000316052 C7orf66A4D0T2 115 aa12.26□□□□□ -0.45
EXOSC4-201ENST00000316052 PRAF2O60831 178 aa12.26□□□□□ -0.45
EXOSC4-201ENST00000316052 HYPMO75409 117 aa12.26□□□□□ -0.45
EXOSC4-201ENST00000316052 CCNKO75909 580 aa12.26□□□□□ -0.45
EXOSC4-201ENST00000316052 NDUFB6O95139 128 aa12.26□□□□□ -0.45
EXOSC4-201ENST00000316052 TSPOP30536 169 aa12.26□□□□□ -0.45
EXOSC4-201ENST00000316052 S100A7P31151 101 aa12.26□□□□□ -0.45
EXOSC4-201ENST00000316052 UHRF2Q96PU4 802 aa12.26□□□□□ -0.45
EXOSC4-201ENST00000316052 HIGD1AQ9Y241 93 aa12.26□□□□□ -0.45
EXOSC4-201ENST00000316052 C9orf170A2RU37 121 aa12.25□□□□□ -0.45
EXOSC4-201ENST00000316052 BOLA2-SMG1P6H3BVE0 249 aa12.25□□□□□ -0.45
EXOSC4-201ENST00000316052 H2AFB2P0C5Z0 115 aa12.25□□□□□ -0.45
EXOSC4-201ENST00000316052 CXCL3P19876 107 aa12.25□□□□□ -0.45
EXOSC4-201ENST00000316052 PLP1P60201 277 aa12.25□□□□□ -0.45
EXOSC4-201ENST00000316052 B2MP61769 119 aa12.25□□□□□ -0.45
EXOSC4-201ENST00000316052 NUDT15Q9NV35 164 aa12.25□□□□□ -0.45
EXOSC4-201ENST00000316052 PSENENQ9NZ42 101 aa12.25□□□□□ -0.45
EXOSC4-201ENST00000316052 F5H768 121 aa12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 OR5G3P0C626 314 aa12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 LINC00869P0C866 280 aa12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 RPL7P18124 248 aaKnown RBP12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 FAM3BP58499 235 aaPredicted RBP12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 RAP2BP61225 183 aa12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 HIST1H1AQ02539 215 aaPredicted RBP12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 PSG3Q16557 428 aa12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 PATE2Q6UY27 113 aa12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 OR8A1Q8NGG7 326 aa12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 LINC01587Q99440 93 aa12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 ATG101Q9BSB4 218 aa12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 C20orf85Q9H1P6 137 aa12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 FLVCR2Q9UPI3 526 aa12.24□□□□□ -0.45
EXOSC4-201ENST00000316052 A0A087X0K7 114 aa12.23□□□□□ -0.45
EXOSC4-201ENST00000316052 MRPS12O15235 138 aaKnown RBP12.23□□□□□ -0.45
EXOSC4-201ENST00000316052 UBE2MP61081 183 aaKnown RBP12.23□□□□□ -0.45
EXOSC4-201ENST00000316052 RRAS2P62070 204 aaPredicted RBP12.23□□□□□ -0.45
EXOSC4-201ENST00000316052 RHOBP62745 196 aa12.23□□□□□ -0.45
EXOSC4-201ENST00000316052 ZNRF2Q8NHG8 242 aa12.23□□□□□ -0.45
EXOSC4-201ENST00000316052 SMIM8Q96KF7 97 aa12.23□□□□□ -0.45
EXOSC4-201ENST00000316052 APOBP04114 4563 aaKnown RBP12.23□□□□□ -0.45
EXOSC4-201ENST00000316052 DNAH5Q8TE73 4624 aa12.22□□□□□ -0.45
EXOSC4-201ENST00000316052 SSSCA1O60232 199 aa12.22□□□□□ -0.45
EXOSC4-201ENST00000316052 NUDT3O95989 172 aa12.22□□□□□ -0.45
EXOSC4-201ENST00000316052 SELENOTP62341 195 aa12.22□□□□□ -0.45
EXOSC4-201ENST00000316052 TNP2Q05952 138 aa12.22□□□□□ -0.45
EXOSC4-201ENST00000316052 AKAP14Q86UN6 197 aa12.22□□□□□ -0.45
EXOSC4-201ENST00000316052 ARL6Q9H0F7 186 aa12.22□□□□□ -0.45
EXOSC4-201ENST00000316052 ALG5Q9Y673 324 aa12.22□□□□□ -0.45
EXOSC4-201ENST00000316052 NBDYA0A0U1RRE5 68 aa12.21□□□□□ -0.45
EXOSC4-201ENST00000316052 CBY3A6NI87 242 aa12.21□□□□□ -0.45
EXOSC4-201ENST00000316052 ATP5G1P05496 136 aa12.21□□□□□ -0.45
EXOSC4-201ENST00000316052 METTL15P1P0C7V9 234 aa12.21□□□□□ -0.45
EXOSC4-201ENST00000316052 HTN1P15515 57 aa12.21□□□□□ -0.45
EXOSC4-201ENST00000316052 ATP5G3P48201 142 aa12.21□□□□□ -0.45
EXOSC4-201ENST00000316052 TAS2R60P59551 318 aa12.21□□□□□ -0.45
EXOSC4-201ENST00000316052 DLK1P80370 383 aa12.21□□□□□ -0.45
EXOSC4-201ENST00000316052 TMEM14EPQ6UXP3 125 aa12.21□□□□□ -0.45
EXOSC4-201ENST00000316052 TMEM256Q8N2U0 113 aa12.21□□□□□ -0.45
EXOSC4-201ENST00000316052 RPUSD4Q96CM3 377 aaKnown RBP12.21□□□□□ -0.45
EXOSC4-201ENST00000316052 NPVFQ9HCQ7 196 aa12.21□□□□□ -0.45
EXOSC4-201ENST00000316052 PPP1R14DQ9NXH3 145 aa12.21□□□□□ -0.45
EXOSC4-201ENST00000316052 TRAV6A0A075B6T7 132 aa12.2□□□□□ -0.46
EXOSC4-201ENST00000316052 K7EPK0 472 aa12.2□□□□□ -0.46
EXOSC4-201ENST00000316052 SNRPCP09234 159 aaKnown RBP12.2□□□□□ -0.46
EXOSC4-201ENST00000316052 SLC38A11Q08AI6 406 aa12.2□□□□□ -0.46
EXOSC4-201ENST00000316052 KIR3DS1Q14943 382 aa12.2□□□□□ -0.46
EXOSC4-201ENST00000316052 LRRC20Q8TCA0 184 aa12.2□□□□□ -0.46
EXOSC4-201ENST00000316052 ARV1Q9H2C2 271 aa12.2□□□□□ -0.46
EXOSC4-201ENST00000316052 LINC00588Q9Y4M8 146 aa12.2□□□□□ -0.46
EXOSC4-201ENST00000316052 OR4E1P0C645 316 aa12.19□□□□□ -0.46
EXOSC4-201ENST00000316052 ARL16Q0P5N6 197 aa12.19□□□□□ -0.46
EXOSC4-201ENST00000316052 RNF141Q8WVD5 230 aa12.19□□□□□ -0.46
EXOSC4-201ENST00000316052 GPN1Q9HCN4 374 aaPredicted RBP12.19□□□□□ -0.46
EXOSC4-201ENST00000316052 NOP10Q9NPE3 64 aaKnown RBP12.19□□□□□ -0.46
EXOSC4-201ENST00000316052 TIMM8BQ9Y5J9 83 aaPredicted RBP12.19□□□□□ -0.46
EXOSC4-201ENST00000316052 FNDC10F2Z333 226 aa12.18□□□□□ -0.46
EXOSC4-201ENST00000316052 ANXA7P20073 488 aaKnown RBP12.18□□□□□ -0.46
EXOSC4-201ENST00000316052 CDKN1BP46527 198 aa12.18□□□□□ -0.46
EXOSC4-201ENST00000316052 TEPPQ6URK8 271 aa12.18□□□□□ -0.46
EXOSC4-201ENST00000316052 OR10P1Q8NGE3 313 aa12.18□□□□□ -0.46
EXOSC4-201ENST00000316052 RNASE8Q8TDE3 154 aaKnown RBP12.18□□□□□ -0.46
EXOSC4-201ENST00000316052 C16orf74Q96GX8 76 aa12.18□□□□□ -0.46
EXOSC4-201ENST00000316052 PARD6GQ9BYG4 376 aaPredicted RBP12.18□□□□□ -0.46
EXOSC4-201ENST00000316052 PRAC2D3DTV9 90 aa12.17□□□□□ -0.46
EXOSC4-201ENST00000316052 SCGB1D2O95969 90 aa12.17□□□□□ -0.46
EXOSC4-201ENST00000316052 CCL18P55774 89 aa12.17□□□□□ -0.46
EXOSC4-201ENST00000316052 IAH1Q2TAA2 248 aaPredicted RBP12.17□□□□□ -0.46
EXOSC4-201ENST00000316052 LINC00305Q7Z4B0 112 aa12.17□□□□□ -0.46
EXOSC4-201ENST00000316052 C6orf223Q8N319 242 aa12.17□□□□□ -0.46
EXOSC4-201ENST00000316052 ZNF331Q9NQX6 463 aaPredicted RBP12.17□□□□□ -0.46
EXOSC4-201ENST00000316052 RCL1Q9Y2P8 373 aaKnown RBP12.17□□□□□ -0.46
EXOSC4-201ENST00000316052 H3BTX0 84 aa12.16□□□□□ -0.46
EXOSC4-201ENST00000316052 GOSR2O14653 212 aa12.16□□□□□ -0.46
EXOSC4-201ENST00000316052 AGPAT2O15120 278 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms