RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 DLX4Q92988 240 aaPredicted RBP10.31□□□□□ -0.76
USP38-201ENST00000307017 LYPD3O95274 346 aa10.3□□□□□ -0.76
USP38-201ENST00000307017 UBE2V1Q13404 147 aa10.3□□□□□ -0.76
USP38-201ENST00000307017 MRPL52Q86TS9 123 aaKnown RBP10.3□□□□□ -0.76
USP38-201ENST00000307017 TMEM126AQ9H061 195 aa10.3□□□□□ -0.76
USP38-201ENST00000307017 J3QRE1 110 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 PRIMA1Q86XR5 153 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 CACNG8Q8WXS5 425 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 MAP1BP46821 2468 aaKnown RBP10.29□□□□□ -0.76
USP38-201ENST00000307017 IGLV3-21P80748 117 aaPredicted RBP10.29□□□□□ -0.76
USP38-201ENST00000307017 IGHV4-28A0A0C4DH34 117 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 H3BMM0 161 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 LEPROTO15243 131 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 FGF16O43320 207 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 IGLV2-23P01705 113 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 UBE2WQ96B02 151 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 PRADC1Q9BSG0 188 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 TIMM21Q9BVV7 248 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 HEATR5AQ86XA9 2040 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 WDR81Q562E7 1941 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 SLC25A16P16260 332 aa10.29□□□□□ -0.76
USP38-201ENST00000307017 DOCK8Q8NF50 2099 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 GNLYP22749 145 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 ZNF672Q499Z4 452 aaPredicted RBP10.28□□□□□ -0.76
USP38-201ENST00000307017 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.28□□□□□ -0.76
USP38-201ENST00000307017 SP7Q8TDD2 431 aaPredicted RBP10.28□□□□□ -0.76
USP38-201ENST00000307017 VWCEQ96DN2 955 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 PRSS22Q9GZN4 317 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 A0A0G2JMZ2 1700 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 LRRC37A2A6NM11 1700 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 LRRC37AA6NMS7 1700 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 TMEM238C9JI98 176 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 PVRIGQ6DKI7 326 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 RASL11AQ6T310 242 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 TP53TG1Q9Y2A0 90 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 TRBV20-1A0A075B6N2 111 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 CHKB-CPT1BH3BT56 60 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 HAMPP81172 84 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 CEP250Q9BV73 2442 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 ARFGEF3Q5TH69 2177 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 Q6AWC8 147 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 Q6ZRM9 215 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 TMEM242Q9NWH2 141 aa10.28□□□□□ -0.76
USP38-201ENST00000307017 GAGE6Q13070 117 aa10.27□□□□□ -0.76
USP38-201ENST00000307017 ANKRD39Q53RE8 183 aa10.27□□□□□ -0.76
USP38-201ENST00000307017 PLSCR4Q9NRQ2 329 aa10.27□□□□□ -0.76
USP38-201ENST00000307017 WISP1O95388 367 aa10.27□□□□□ -0.77
USP38-201ENST00000307017 SEC11AP67812 179 aa10.27□□□□□ -0.77
USP38-201ENST00000307017 PMVKQ15126 192 aa10.27□□□□□ -0.77
USP38-201ENST00000307017 TRGV11A0A075B6L2 103 aa10.27□□□□□ -0.77
USP38-201ENST00000307017 Q0VFX4 171 aa10.27□□□□□ -0.77
USP38-201ENST00000307017 PRR30Q53SZ7 412 aaPredicted RBP10.27□□□□□ -0.77
USP38-201ENST00000307017 TSC2P49815 1807 aa10.27□□□□□ -0.77
USP38-201ENST00000307017 CSRP3P50461 194 aa10.27□□□□□ -0.77
USP38-201ENST00000307017 SLC50A1Q9BRV3 221 aa10.27□□□□□ -0.77
USP38-201ENST00000307017 IGHV1-8P0DP01 117 aa10.26□□□□□ -0.77
USP38-201ENST00000307017 ID3Q02535 119 aa10.26□□□□□ -0.77
USP38-201ENST00000307017 PIP4P2Q8N4L2 257 aa10.26□□□□□ -0.77
USP38-201ENST00000307017 MORN3Q6PF18 240 aaPredicted RBP10.26□□□□□ -0.77
USP38-201ENST00000307017 GATA4P43694 442 aa10.26□□□□□ -0.77
USP38-201ENST00000307017 VWC2Q2TAL6 325 aa10.26□□□□□ -0.77
USP38-201ENST00000307017 BRWD3Q6RI45 1802 aa10.26□□□□□ -0.77
USP38-201ENST00000307017 LOC102723996A0A087X1L8 192 aa10.26□□□□□ -0.77
USP38-201ENST00000307017 H0YJW9 148 aa10.26□□□□□ -0.77
USP38-201ENST00000307017 SNHG12Q9BXW3 62 aa10.26□□□□□ -0.77
USP38-201ENST00000307017 H3BMG7 143 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 EFNA4P52798 201 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 COL5A3P25940 1745 aaPredicted RBP10.25□□□□□ -0.77
USP38-201ENST00000307017 C22orf46C9J442 243 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 PAX9P55771 341 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 HLA-DRB4P13762 266 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 UCNP55089 124 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 HLA-DRB4X5D2U9 266 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 hADV29S1A0JD25 119 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 TEX36Q5VZQ5 186 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 SPSB3Q6PJ21 355 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 MBD3L4A6NDZ8 208 aaPredicted RBP10.25□□□□□ -0.77
USP38-201ENST00000307017 MBD3L3A6NE82 208 aaPredicted RBP10.25□□□□□ -0.77
USP38-201ENST00000307017 LINC01549A6NIU2 74 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 MBD3L5A6NJ08 208 aaPredicted RBP10.25□□□□□ -0.77
USP38-201ENST00000307017 GAS1P54826 345 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 DEFB131AP59861 70 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 GGNQ86UU5 652 aa10.25□□□□□ -0.77
USP38-201ENST00000307017 MBD3L2Q8NHZ7 208 aaPredicted RBP10.25□□□□□ -0.77
USP38-201ENST00000307017 TMEM75Q8N9X5 138 aa10.24□□□□□ -0.77
USP38-201ENST00000307017 FAM110DQ8TAY7 271 aaPredicted RBP10.24□□□□□ -0.77
USP38-201ENST00000307017 KLF12Q9Y4X4 402 aa10.24□□□□□ -0.77
USP38-201ENST00000307017 TRAV9-1A0A075B6T8 112 aa10.24□□□□□ -0.77
USP38-201ENST00000307017 A0A0G2JNJ9 132 aa10.24□□□□□ -0.77
USP38-201ENST00000307017 G3V318 75 aa10.24□□□□□ -0.77
USP38-201ENST00000307017 MPZP25189 248 aa10.24□□□□□ -0.77
USP38-201ENST00000307017 RBMY1FQ15415 496 aaKnown RBP10.24□□□□□ -0.77
USP38-201ENST00000307017 Q9UFV3 132 aa10.24□□□□□ -0.77
USP38-201ENST00000307017 HLA-DMBP28068 263 aa10.24□□□□□ -0.77
USP38-201ENST00000307017 WDR83OSQ9Y284 106 aa10.24□□□□□ -0.77
USP38-201ENST00000307017 TCF20Q9UGU0 1960 aaKnown RBP10.24□□□□□ -0.77
USP38-201ENST00000307017 OVOL3O00110 214 aa10.24□□□□□ -0.77
USP38-201ENST00000307017 SLAQ13239 276 aa10.24□□□□□ -0.77
USP38-201ENST00000307017 C15orf62A8K5M9 175 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms