RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 TMEM190Q8WZ59 177 aa17.51■□□□□ 0.39
PTX3-201ENST00000295927 CXorf65A6NEN9 183 aa17.51■□□□□ 0.39
PTX3-201ENST00000295927 ISLRO14498 428 aa17.51■□□□□ 0.39
PTX3-201ENST00000295927 FAM24BQ8N5W8 94 aa17.51■□□□□ 0.39
PTX3-201ENST00000295927 KLHDC1Q8N7A1 406 aa17.51■□□□□ 0.39
PTX3-201ENST00000295927 YPEL4Q96NS1 127 aa17.51■□□□□ 0.39
PTX3-201ENST00000295927 ZNF320A2RRD8 509 aa17.5■□□□□ 0.39
PTX3-201ENST00000295927 TMEM183BQ1AE95 376 aa17.5■□□□□ 0.39
PTX3-201ENST00000295927 ZNF418Q8TF45 676 aaPredicted RBP17.5■□□□□ 0.39
PTX3-201ENST00000295927 ANAPC16Q96DE5 110 aa17.5■□□□□ 0.39
PTX3-201ENST00000295927 UBE2E2Q96LR5 201 aa17.5■□□□□ 0.39
PTX3-201ENST00000295927 KLF12Q9Y4X4 402 aa17.5■□□□□ 0.39
PTX3-201ENST00000295927 MTORP42345 2549 aa17.5■□□□□ 0.39
PTX3-201ENST00000295927 IGLV2-8P01709 118 aa17.49■□□□□ 0.39
PTX3-201ENST00000295927 RNASE1P07998 156 aaKnown RBP17.49■□□□□ 0.39
PTX3-201ENST00000295927 GALR1P47211 349 aa17.49■□□□□ 0.39
PTX3-201ENST00000295927 PSG9Q00887 426 aa17.49■□□□□ 0.39
PTX3-201ENST00000295927 HIVEP2P31629 2446 aa17.49■□□□□ 0.39
PTX3-201ENST00000295927 ZNF785A8K8V0 405 aa17.49■□□□□ 0.39
PTX3-201ENST00000295927 LGALS1P09382 135 aaKnown RBP17.49■□□□□ 0.39
PTX3-201ENST00000295927 AAMDCQ9H7C9 122 aa17.49■□□□□ 0.39
PTX3-201ENST00000295927 URGCP-MRPS24S4R325 110 aa17.49■□□□□ 0.39
PTX3-201ENST00000295927 A0A087X0K7 114 aa17.48■□□□□ 0.39
PTX3-201ENST00000295927 H7BYZ3 331 aa17.48■□□□□ 0.39
PTX3-201ENST00000295927 UBE2G1P62253 170 aa17.48■□□□□ 0.39
PTX3-201ENST00000295927 C16orf54Q6UWD8 224 aa17.48■□□□□ 0.39
PTX3-201ENST00000295927 SFRP2Q96HF1 295 aa17.48■□□□□ 0.39
PTX3-201ENST00000295927 SGK494Q96LW2 274 aa17.48■□□□□ 0.39
PTX3-201ENST00000295927 ZNF253O75346 499 aa17.47■□□□□ 0.39
PTX3-201ENST00000295927 CD99P14209 185 aa17.47■□□□□ 0.39
PTX3-201ENST00000295927 M0R3E3 92 aa17.47■□□□□ 0.39
PTX3-201ENST00000295927 CRYBA1P05813 215 aa17.47■□□□□ 0.39
PTX3-201ENST00000295927 OR5I1Q13606 314 aa17.47■□□□□ 0.39
PTX3-201ENST00000295927 ELOBQ15370 118 aa17.47■□□□□ 0.39
PTX3-201ENST00000295927 FAM106AQ4KMX7 169 aa17.47■□□□□ 0.39
PTX3-201ENST00000295927 GOLT1AQ6ZVE7 132 aa17.47■□□□□ 0.39
PTX3-201ENST00000295927 Q71RC1 249 aaPredicted RBP17.47■□□□□ 0.39
PTX3-201ENST00000295927 BAGE2Q86Y30 109 aa17.47■□□□□ 0.39
PTX3-201ENST00000295927 GPHB5Q86YW7 130 aa17.47■□□□□ 0.39
PTX3-201ENST00000295927 FMC1Q96HJ9 113 aa17.47■□□□□ 0.39
PTX3-201ENST00000295927 CUBNO60494 3623 aa17.47■□□□□ 0.39
PTX3-201ENST00000295927 S100A9P06702 114 aaKnown RBP17.46■□□□□ 0.39
PTX3-201ENST00000295927 HILS1P60008 231 aa17.46■□□□□ 0.39
PTX3-201ENST00000295927 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.46■□□□□ 0.39
PTX3-201ENST00000295927 NHLRC2Q8NBF2 726 aa17.46■□□□□ 0.39
PTX3-201ENST00000295927 GLMPQ8WWB7 406 aa17.46■□□□□ 0.39
PTX3-201ENST00000295927 RPEL1Q2QD12 228 aa17.45■□□□□ 0.38
PTX3-201ENST00000295927 TM4SF20Q53R12 229 aa17.45■□□□□ 0.38
PTX3-201ENST00000295927 ZNF331Q9NQX6 463 aaPredicted RBP17.45■□□□□ 0.38
PTX3-201ENST00000295927 PPP1R2P9O14990 202 aa17.45■□□□□ 0.38
PTX3-201ENST00000295927 GCGP01275 180 aa17.45■□□□□ 0.38
PTX3-201ENST00000295927 MGST1P10620 155 aaKnown RBP17.45■□□□□ 0.38
PTX3-201ENST00000295927 DAZ1Q9NQZ3 744 aaKnown RBP17.45■□□□□ 0.38
PTX3-201ENST00000295927 DIRC3C9JPN6 131 aa17.44■□□□□ 0.38
PTX3-201ENST00000295927 PRB4P10163 310 aaPredicted RBP17.44■□□□□ 0.38
PTX3-201ENST00000295927 TCTEX1D4Q5JR98 221 aa17.44■□□□□ 0.38
PTX3-201ENST00000295927 OR10G8Q8NGN5 311 aa17.44■□□□□ 0.38
PTX3-201ENST00000295927 TRAV8-1A0A0A6YYK1 113 aa17.43■□□□□ 0.38
PTX3-201ENST00000295927 A0A1W2PS18 150 aa17.43■□□□□ 0.38
PTX3-201ENST00000295927 IGFL4Q6B9Z1 124 aa17.43■□□□□ 0.38
PTX3-201ENST00000295927 IGHV4OR15-8A0A075B7B6 117 aa17.43■□□□□ 0.38
PTX3-201ENST00000295927 A0A087WW49 117 aa17.43■□□□□ 0.38
PTX3-201ENST00000295927 IGHV7-4-1A0A0J9YVY3 117 aa17.43■□□□□ 0.38
PTX3-201ENST00000295927 K7EMT4 169 aa17.43■□□□□ 0.38
PTX3-201ENST00000295927 IGLV2-11P01706 119 aa17.43■□□□□ 0.38
PTX3-201ENST00000295927 FOSL1P15407 271 aa17.43■□□□□ 0.38
PTX3-201ENST00000295927 HLA-DMBP28068 263 aa17.43■□□□□ 0.38
PTX3-201ENST00000295927 GRAMD2BQ96HH9 432 aa17.43■□□□□ 0.38
PTX3-201ENST00000295927 TGIF2-C20orf24A0A0A6YYL0 155 aa17.42■□□□□ 0.38
PTX3-201ENST00000295927 CXCL1P09341 107 aa17.42■□□□□ 0.38
PTX3-201ENST00000295927 CSN1S1P47710 185 aa17.42■□□□□ 0.38
PTX3-201ENST00000295927 ERVFC1-1P60608 527 aa17.42■□□□□ 0.38
PTX3-201ENST00000295927 C18orf65Q6ZTR6 163 aa17.42■□□□□ 0.38
PTX3-201ENST00000295927 NF1P21359 2839 aa17.42■□□□□ 0.38
PTX3-201ENST00000295927 INAFM1C9JVW0 142 aa17.41■□□□□ 0.38
PTX3-201ENST00000295927 LTAP01374 205 aa17.41■□□□□ 0.38
PTX3-201ENST00000295927 PFN1P07737 140 aaKnown RBP17.41■□□□□ 0.38
PTX3-201ENST00000295927 CDX1P47902 265 aaPredicted RBP17.41■□□□□ 0.38
PTX3-201ENST00000295927 SLC50A1Q9BRV3 221 aa17.41■□□□□ 0.38
PTX3-201ENST00000295927 UFC1Q9Y3C8 167 aa17.41■□□□□ 0.38
PTX3-201ENST00000295927 K7EQM0 130 aa17.41■□□□□ 0.38
PTX3-201ENST00000295927 RAB5AP20339 215 aa17.41■□□□□ 0.38
PTX3-201ENST00000295927 MEOX2P50222 304 aa17.41■□□□□ 0.38
PTX3-201ENST00000295927 Q86TA4 180 aa17.41■□□□□ 0.38
PTX3-201ENST00000295927 ARL6IP6Q8N6S5 226 aa17.41■□□□□ 0.38
PTX3-201ENST00000295927 TMEM75Q8N9X5 138 aa17.41■□□□□ 0.38
PTX3-201ENST00000295927 RHPN1-AS1Q9BWJ2 59 aa17.41■□□□□ 0.38
PTX3-201ENST00000295927 RNASE7Q9H1E1 156 aaKnown RBP17.41■□□□□ 0.38
PTX3-201ENST00000295927 C16orf95Q9H693 158 aa17.41■□□□□ 0.38
PTX3-201ENST00000295927 SMPXQ9UHP9 88 aa17.41■□□□□ 0.38
PTX3-201ENST00000295927 WIPF2Q8TF74 440 aaPredicted RBP17.4■□□□□ 0.38
PTX3-201ENST00000295927 SMIM12Q96EX1 92 aa17.4■□□□□ 0.38
PTX3-201ENST00000295927 MLST8Q9BVC4 326 aa17.4■□□□□ 0.38
PTX3-201ENST00000295927 TRBV6-1A0A0K0K1D8 114 aa17.39■□□□□ 0.37
PTX3-201ENST00000295927 EDN2P20800 178 aa17.39■□□□□ 0.37
PTX3-201ENST00000295927 PSG3Q16557 428 aa17.39■□□□□ 0.37
PTX3-201ENST00000295927 C8orf86Q6ZUL3 223 aa17.39■□□□□ 0.37
PTX3-201ENST00000295927 PRNTQ86SH4 94 aa17.39■□□□□ 0.37
PTX3-201ENST00000295927 OSTCQ9NRP0 149 aa17.39■□□□□ 0.37
PTX3-201ENST00000295927 CHEK1O14757 476 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms