RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 NDPQ00604 133 aa9.4□□□□□ -0.9
SLC13A3-201ENST00000279027 TWIST1Q15672 202 aa9.4□□□□□ -0.9
SLC13A3-201ENST00000279027 SAA4P35542 130 aa9.4□□□□□ -0.91
SLC13A3-201ENST00000279027 IGLV2-8P01709 118 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 C3orf79P0CE67 100 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 RIGQ13278 110 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 LINC00322Q6ZN03 302 aaPredicted RBP9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 NIT1Q86X76 327 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 C8orf49Q96NF6 230 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 UFC1Q9Y3C8 167 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 TRAV9-1A0A075B6T8 112 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 LEPROTL1O95214 131 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 GOSR1O95249 250 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 DYNAPQ8N1N2 210 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 ABCA12Q86UK0 2595 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 PF4V1P10720 104 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 RBPMS2Q6ZRY4 209 aaKnown RBP9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 Q71RC1 249 aaPredicted RBP9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 ERASQ7Z444 233 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 IGF2BP2-AS1Q96M15 143 aa9.39□□□□□ -0.91
SLC13A3-201ENST00000279027 TRAV40A0A0B4J280 105 aa9.38□□□□□ -0.91
SLC13A3-201ENST00000279027 C18orf32Q8TCD1 76 aa9.38□□□□□ -0.91
SLC13A3-201ENST00000279027 K7EIM0 57 aa9.38□□□□□ -0.91
SLC13A3-201ENST00000279027 RPL7P18124 248 aaKnown RBP9.38□□□□□ -0.91
SLC13A3-201ENST00000279027 MAJINQ3KP22 176 aa9.38□□□□□ -0.91
SLC13A3-201ENST00000279027 ARMS2P0C7Q2 107 aa9.38□□□□□ -0.91
SLC13A3-201ENST00000279027 COA6Q5JTJ3 125 aaKnown RBP9.38□□□□□ -0.91
SLC13A3-201ENST00000279027 A0A1B0GUT8 65 aa9.37□□□□□ -0.91
SLC13A3-201ENST00000279027 OR5AL1P0C617 328 aa9.37□□□□□ -0.91
SLC13A3-201ENST00000279027 Q86TA4 180 aa9.37□□□□□ -0.91
SLC13A3-201ENST00000279027 I3L2K1 104 aa9.37□□□□□ -0.91
SLC13A3-201ENST00000279027 RNF182Q8N6D2 247 aa9.37□□□□□ -0.91
SLC13A3-201ENST00000279027 KLHDC1Q8N7A1 406 aa9.37□□□□□ -0.91
SLC13A3-201ENST00000279027 LINC00469Q8N7U9 141 aa9.37□□□□□ -0.91
SLC13A3-201ENST00000279027 ZNF491Q8N8L2 437 aa9.37□□□□□ -0.91
SLC13A3-201ENST00000279027 MAPK1IP1LQ8NDC0 245 aa9.37□□□□□ -0.91
SLC13A3-201ENST00000279027 TRAV30A0A087WSZ9 112 aa9.37□□□□□ -0.91
SLC13A3-201ENST00000279027 SMIM27A0A1W2PRY6 76 aa9.37□□□□□ -0.91
SLC13A3-201ENST00000279027 TP53TG3Q9ULZ0 132 aa9.37□□□□□ -0.91
SLC13A3-201ENST00000279027 RNF24Q9Y225 148 aa9.37□□□□□ -0.91
SLC13A3-201ENST00000279027 APOHP02749 345 aaPredicted RBP9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 ERCC8Q13216 396 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 DMRTA1Q5VZB9 504 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 PVRIGQ6DKI7 326 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 LCNL1Q6ZST4 164 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 SHANK2-AS3Q9BTD1 123 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 ATP6V0E1O15342 81 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 TOMM40O96008 361 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 GP9P14770 177 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 PDLIM4P50479 330 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 C1orf194Q5T5A4 169 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 TMEM75Q8N9X5 138 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 TRGV3P03979 118 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 SRD5A1P18405 259 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 ZNF562Q6V9R5 426 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 WFDC12Q8WWY7 111 aa9.36□□□□□ -0.91
SLC13A3-201ENST00000279027 SMKR1H3BMG3 65 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 NCR2O95944 276 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 EFNA4P52798 201 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 ZC2HC1AQ96GY0 325 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 EPG5Q9HCE0 2579 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 TRBV19A0A075B6N1 114 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 FBLN7Q53RD9 439 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 KHDC1LQ5JSQ8 128 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 OR4B1Q8NGF8 309 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 GLMPQ8WWB7 406 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 SNHG12Q9BXW3 62 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 PPP1R14DQ9NXH3 145 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 TNFRSF13BO14836 293 aaPredicted RBP9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 S100A4P26447 101 aaKnown RBP9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 CKS2P33552 79 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 OR10J3Q5JRS4 329 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 CLEC2AQ6UVW9 174 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 DEFB104AQ8WTQ1 72 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 C16orf92Q96LL3 132 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 C18orf15Q96N68 181 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 CCL19Q99731 98 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 C7orf69Q9H7B7 122 aa9.35□□□□□ -0.91
SLC13A3-201ENST00000279027 TMEM213A2RRL7 107 aa9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 M0R1W7 72 aa9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 GDF5OSQ5U4N7 250 aa9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 C8orf31Q8N9H6 132 aa9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 RNF114Q9Y508 228 aa9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 A0A1W2PPR1 153 aa9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 PSMB11A5LHX3 300 aa9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 BTF3P20290 206 aaKnown RBP9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 Q0VG73 95 aa9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 NRGNQ92686 78 aa9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 MAP1LC3CQ9BXW4 147 aa9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 C2CD3Q4AC94 2353 aa9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 C19orf84I3L1E1 186 aa9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 LYZL1Q6UWQ5 148 aa9.34□□□□□ -0.91
SLC13A3-201ENST00000279027 OR4C46A6NHA9 309 aa9.34□□□□□ -0.92
SLC13A3-201ENST00000279027 LINC01548A6NM66 108 aa9.34□□□□□ -0.92
SLC13A3-201ENST00000279027 GTSF1Q8WW33 167 aa9.34□□□□□ -0.92
SLC13A3-201ENST00000279027 METTL26Q96S19 204 aa9.34□□□□□ -0.92
SLC13A3-201ENST00000279027 CRYGCP07315 174 aa9.33□□□□□ -0.92
SLC13A3-201ENST00000279027 SMIM15Q7Z3B0 74 aa9.33□□□□□ -0.92
SLC13A3-201ENST00000279027 MIEN1Q9BRT3 115 aa9.33□□□□□ -0.92
SLC13A3-201ENST00000279027 ABCA2Q9BZC7 2435 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms