RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 PRR31Q5SQ13 230 aa17.93■□□□□ 0.46
RAB40B-201ENST00000269347 GPR82Q96P67 336 aa17.93■□□□□ 0.46
RAB40B-201ENST00000269347 MRPL18Q9H0U6 180 aaKnown RBP17.93■□□□□ 0.46
RAB40B-201ENST00000269347 CLPSL1A2RUU4 121 aa17.93■□□□□ 0.46
RAB40B-201ENST00000269347 NUPR1O60356 82 aa17.93■□□□□ 0.46
RAB40B-201ENST00000269347 OR4F17Q8NGA8 305 aa17.93■□□□□ 0.46
RAB40B-201ENST00000269347 TRAV41A0A0B4J266 112 aa17.92■□□□□ 0.46
RAB40B-201ENST00000269347 Q86TA4 180 aa17.92■□□□□ 0.46
RAB40B-201ENST00000269347 HLA-DMBP28068 263 aa17.91■□□□□ 0.46
RAB40B-201ENST00000269347 MRPL54Q6P161 138 aaKnown RBP17.91■□□□□ 0.46
RAB40B-201ENST00000269347 FAM231DQ6ZW35 169 aa17.91■□□□□ 0.46
RAB40B-201ENST00000269347 TMEM256Q8N2U0 113 aa17.91■□□□□ 0.46
RAB40B-201ENST00000269347 GRIFINA4D1Z8 144 aa17.91■□□□□ 0.46
RAB40B-201ENST00000269347 APOHP02749 345 aaPredicted RBP17.91■□□□□ 0.46
RAB40B-201ENST00000269347 RPL19P84098 196 aaKnown RBP17.91■□□□□ 0.46
RAB40B-201ENST00000269347 TXN2Q99757 166 aa17.91■□□□□ 0.46
RAB40B-201ENST00000269347 TP53TG3Q9ULZ0 132 aa17.91■□□□□ 0.46
RAB40B-201ENST00000269347 IGHV3OR16-13A0A075B7E8 117 aa17.9■□□□□ 0.46
RAB40B-201ENST00000269347 IGHV3-74A0A0B4J1X5 117 aa17.9■□□□□ 0.46
RAB40B-201ENST00000269347 IGHV3-66A0A0C4DH42 116 aa17.9■□□□□ 0.46
RAB40B-201ENST00000269347 RNF223E7ERA6 249 aa17.9■□□□□ 0.46
RAB40B-201ENST00000269347 PKIAP61925 76 aa17.9■□□□□ 0.46
RAB40B-201ENST00000269347 HIST2H2BCQ6DN03 193 aa17.9■□□□□ 0.46
RAB40B-201ENST00000269347 LCNL1Q6ZST4 164 aa17.9■□□□□ 0.46
RAB40B-201ENST00000269347 PRNTQ86SH4 94 aa17.9■□□□□ 0.46
RAB40B-201ENST00000269347 FMC1Q96HJ9 113 aa17.9■□□□□ 0.46
RAB40B-201ENST00000269347 SNURFLB1AK76 121 aa17.9■□□□□ 0.46
RAB40B-201ENST00000269347 IGHG4P01861 327 aa17.9■□□□□ 0.46
RAB40B-201ENST00000269347 FAM209BQ5JX69 171 aa17.9■□□□□ 0.46
RAB40B-201ENST00000269347 KMT2BQ9UMN6 2715 aaPredicted RBP17.9■□□□□ 0.46
RAB40B-201ENST00000269347 GATCO43716 136 aaKnown RBP17.89■□□□□ 0.45
RAB40B-201ENST00000269347 TRBV12-3P01733 135 aa17.89■□□□□ 0.45
RAB40B-201ENST00000269347 SLC25A16P16260 332 aa17.89■□□□□ 0.45
RAB40B-201ENST00000269347 DSCR9P59020 149 aa17.89■□□□□ 0.45
RAB40B-201ENST00000269347 GNB4Q9HAV0 340 aa17.89■□□□□ 0.45
RAB40B-201ENST00000269347 C19orf71A6NCJ1 209 aa17.89■□□□□ 0.45
RAB40B-201ENST00000269347 F2Z2F3 143 aa17.89■□□□□ 0.45
RAB40B-201ENST00000269347 TSTD3H0UI37 97 aa17.89■□□□□ 0.45
RAB40B-201ENST00000269347 ZNF207O43670 478 aaKnown RBP17.89■□□□□ 0.45
RAB40B-201ENST00000269347 CRIP2P52943 208 aaPredicted RBP17.89■□□□□ 0.45
RAB40B-201ENST00000269347 GDF5OSQ5U4N7 250 aa17.89■□□□□ 0.45
RAB40B-201ENST00000269347 GNB1LQ9BYB4 327 aa17.89■□□□□ 0.45
RAB40B-201ENST00000269347 PRO1933Q9H354 126 aa17.89■□□□□ 0.45
RAB40B-201ENST00000269347 IGHV3-49A0A0A0MS15 119 aa17.88■□□□□ 0.45
RAB40B-201ENST00000269347 LINC00310P59036 64 aa17.88■□□□□ 0.45
RAB40B-201ENST00000269347 TMEM136Q6ZRR5 245 aa17.88■□□□□ 0.45
RAB40B-201ENST00000269347 RABAC1Q9UI14 185 aa17.88■□□□□ 0.45
RAB40B-201ENST00000269347 CRISP2P16562 243 aa17.87■□□□□ 0.45
RAB40B-201ENST00000269347 NUP35Q8NFH5 326 aa17.87■□□□□ 0.45
RAB40B-201ENST00000269347 CMTM2Q8TAZ6 248 aa17.87■□□□□ 0.45
RAB40B-201ENST00000269347 PRSS22Q9GZN4 317 aa17.87■□□□□ 0.45
RAB40B-201ENST00000269347 KLK15Q9H2R5 256 aa17.87■□□□□ 0.45
RAB40B-201ENST00000269347 DIRC3C9JPN6 131 aa17.87■□□□□ 0.45
RAB40B-201ENST00000269347 PPIFP30405 207 aaKnown RBP17.87■□□□□ 0.45
RAB40B-201ENST00000269347 DEFB112Q30KQ8 113 aa17.87■□□□□ 0.45
RAB40B-201ENST00000269347 TMEM95Q3KNT9 176 aa17.87■□□□□ 0.45
RAB40B-201ENST00000269347 KIAA1644Q3SXP7 199 aa17.87■□□□□ 0.45
RAB40B-201ENST00000269347 LINC01356Q8N9X3 169 aa17.87■□□□□ 0.45
RAB40B-201ENST00000269347 WDR73Q6P4I2 378 aa17.86■□□□□ 0.45
RAB40B-201ENST00000269347 TCF24Q7RTU0 167 aa17.86■□□□□ 0.45
RAB40B-201ENST00000269347 ZC2HC1AQ96GY0 325 aa17.86■□□□□ 0.45
RAB40B-201ENST00000269347 NEU1Q99519 415 aa17.86■□□□□ 0.45
RAB40B-201ENST00000269347 CUBNO60494 3623 aa17.86■□□□□ 0.45
RAB40B-201ENST00000269347 TGFAP01135 160 aa17.86■□□□□ 0.45
RAB40B-201ENST00000269347 IGHG2P01859 326 aa17.86■□□□□ 0.45
RAB40B-201ENST00000269347 DEFA6Q01524 100 aa17.86■□□□□ 0.45
RAB40B-201ENST00000269347 GTSF1Q8WW33 167 aa17.86■□□□□ 0.45
RAB40B-201ENST00000269347 GRAMD2BQ96HH9 432 aa17.86■□□□□ 0.45
RAB40B-201ENST00000269347 IGHV4-59P01825 116 aa17.85■□□□□ 0.45
RAB40B-201ENST00000269347 IGF1P05019 195 aa17.85■□□□□ 0.45
RAB40B-201ENST00000269347 NAT8BQ9UHF3 227 aa17.85■□□□□ 0.45
RAB40B-201ENST00000269347 PRRC2AP48634 2157 aaKnown RBP17.85■□□□□ 0.45
RAB40B-201ENST00000269347 IZUMO1RA6ND01 250 aa17.84■□□□□ 0.45
RAB40B-201ENST00000269347 BUB3O43684 328 aa17.84■□□□□ 0.45
RAB40B-201ENST00000269347 MT-ND6P03923 174 aa17.84■□□□□ 0.45
RAB40B-201ENST00000269347 CRIP1P50238 77 aa17.84■□□□□ 0.45
RAB40B-201ENST00000269347 COX19Q49B96 90 aa17.84■□□□□ 0.45
RAB40B-201ENST00000269347 EEF1AKMT3Q96AZ1 226 aa17.84■□□□□ 0.45
RAB40B-201ENST00000269347 C8orf49Q96NF6 230 aa17.84■□□□□ 0.45
RAB40B-201ENST00000269347 ZNF705FA8MVS1 300 aaPredicted RBP17.84■□□□□ 0.45
RAB40B-201ENST00000269347 TRGV3P03979 118 aa17.84■□□□□ 0.45
RAB40B-201ENST00000269347 CREBBPQ92793 2442 aa17.84■□□□□ 0.45
RAB40B-201ENST00000269347 TLN2Q9Y4G6 2542 aa17.83■□□□□ 0.45
RAB40B-201ENST00000269347 IGKV2-40A0A087WW87 121 aaPredicted RBP17.83■□□□□ 0.45
RAB40B-201ENST00000269347 HIGD1CA8MV81 97 aa17.83■□□□□ 0.45
RAB40B-201ENST00000269347 IGKV2D-40P01614 121 aaPredicted RBP17.83■□□□□ 0.45
RAB40B-201ENST00000269347 ATP5G2Q06055 141 aa17.83■□□□□ 0.45
RAB40B-201ENST00000269347 KRTAP1-3Q8IUG1 177 aa17.83■□□□□ 0.45
RAB40B-201ENST00000269347 LYPD1Q8N2G4 141 aa17.83■□□□□ 0.45
RAB40B-201ENST00000269347 PSG8Q9UQ74 426 aa17.83■□□□□ 0.45
RAB40B-201ENST00000269347 BMPR1BO00238 502 aa17.83■□□□□ 0.44
RAB40B-201ENST00000269347 DDTP30046 118 aa17.83■□□□□ 0.44
RAB40B-201ENST00000269347 SMIM12Q96EX1 92 aa17.83■□□□□ 0.44
RAB40B-201ENST00000269347 ITPR3Q14573 2671 aa17.83■□□□□ 0.44
RAB40B-201ENST00000269347 RAB4BP61018 213 aa17.82■□□□□ 0.44
RAB40B-201ENST00000269347 PSG3Q16557 428 aa17.82■□□□□ 0.44
RAB40B-201ENST00000269347 IQCJQ1A5X6 159 aa17.82■□□□□ 0.44
RAB40B-201ENST00000269347 TMEM75Q8N9X5 138 aa17.82■□□□□ 0.44
RAB40B-201ENST00000269347 TSKUQ8WUA8 353 aa17.82■□□□□ 0.44
RAB40B-201ENST00000269347 IGHV3-11P01762 117 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms