RNA–Protein interactions for RNA: ENST00000262962.11

CCDC94-201, Transcript of Coiled-coil domain-containing protein 94, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC94, Length 1,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94-201ENST00000262962 RNF141Q8WVD5 230 aa12.69□□□□□ -0.38
CCDC94-201ENST00000262962 MAP1LC3B2A6NCE7 125 aa12.68□□□□□ -0.38
CCDC94-201ENST00000262962 H3BQ15 152 aa12.68□□□□□ -0.38
CCDC94-201ENST00000262962 OR10J4P0C629 311 aa12.68□□□□□ -0.38
CCDC94-201ENST00000262962 UBE2L3P68036 154 aaKnown RBP12.68□□□□□ -0.38
CCDC94-201ENST00000262962 FAM74A1Q5RGS3 127 aa12.68□□□□□ -0.38
CCDC94-201ENST00000262962 TEX261Q6UWH6 196 aa12.68□□□□□ -0.38
CCDC94-201ENST00000262962 FXYD5Q96DB9 178 aa12.68□□□□□ -0.38
CCDC94-201ENST00000262962 MAP1LC3BQ9GZQ8 125 aa12.68□□□□□ -0.38
CCDC94-201ENST00000262962 ZNF586Q9NXT0 402 aa12.68□□□□□ -0.38
CCDC94-201ENST00000262962 DNAH3Q8TD57 4116 aa12.68□□□□□ -0.38
CCDC94-201ENST00000262962 TRBV19A0A075B6N1 114 aa12.67□□□□□ -0.38
CCDC94-201ENST00000262962 SOCS3O14543 225 aa12.67□□□□□ -0.38
CCDC94-201ENST00000262962 ZNF253O75346 499 aa12.67□□□□□ -0.38
CCDC94-201ENST00000262962 NBEAP1P0C6P0 100 aa12.67□□□□□ -0.38
CCDC94-201ENST00000262962 ID1P41134 155 aa12.67□□□□□ -0.38
CCDC94-201ENST00000262962 PDE6HQ13956 83 aa12.67□□□□□ -0.38
CCDC94-201ENST00000262962 GTSCR1Q86UQ5 136 aa12.67□□□□□ -0.38
CCDC94-201ENST00000262962 MBD3L1Q8WWY6 194 aa12.67□□□□□ -0.38
CCDC94-201ENST00000262962 SLC50A1Q9BRV3 221 aa12.67□□□□□ -0.38
CCDC94-201ENST00000262962 ISLRO14498 428 aa12.66□□□□□ -0.38
CCDC94-201ENST00000262962 SNRPCP09234 159 aaKnown RBP12.66□□□□□ -0.38
CCDC94-201ENST00000262962 H2AFB1P0C5Y9 115 aa12.66□□□□□ -0.38
CCDC94-201ENST00000262962 GCHFRP30047 84 aa12.66□□□□□ -0.38
CCDC94-201ENST00000262962 PSMB3P49720 205 aa12.66□□□□□ -0.38
CCDC94-201ENST00000262962 LRRC20Q8TCA0 184 aa12.66□□□□□ -0.38
CCDC94-201ENST00000262962 SAT2Q96F10 170 aaPredicted RBP12.66□□□□□ -0.38
CCDC94-201ENST00000262962 C16orf92Q96LL3 132 aa12.66□□□□□ -0.38
CCDC94-201ENST00000262962 FAM110AQ9BQ89 295 aa12.66□□□□□ -0.38
CCDC94-201ENST00000262962 H3BTX0 84 aa12.65□□□□□ -0.38
CCDC94-201ENST00000262962 IFNA7P01567 189 aa12.65□□□□□ -0.38
CCDC94-201ENST00000262962 CMC4P56277 68 aaPredicted RBP12.65□□□□□ -0.38
CCDC94-201ENST00000262962 CD81P60033 236 aa12.65□□□□□ -0.38
CCDC94-201ENST00000262962 SNRPD3P62318 126 aaKnown RBP12.65□□□□□ -0.38
CCDC94-201ENST00000262962 FAM24BQ8N5W8 94 aa12.65□□□□□ -0.38
CCDC94-201ENST00000262962 SFT2D1Q8WV19 159 aa12.65□□□□□ -0.38
CCDC94-201ENST00000262962 BLNKQ8WV28 456 aa12.65□□□□□ -0.38
CCDC94-201ENST00000262962 ZNF331Q9NQX6 463 aaPredicted RBP12.65□□□□□ -0.38
CCDC94-201ENST00000262962 TMEM167BQ9NRX6 74 aa12.65□□□□□ -0.38
CCDC94-201ENST00000262962 ZNF705EA8MWA4 302 aaPredicted RBP12.64□□□□□ -0.39
CCDC94-201ENST00000262962 SLC17A3O00476 420 aa12.64□□□□□ -0.39
CCDC94-201ENST00000262962 FGF8P55075 233 aaPredicted RBP12.64□□□□□ -0.39
CCDC94-201ENST00000262962 ZNF680Q8NEM1 530 aa12.64□□□□□ -0.39
CCDC94-201ENST00000262962 SUN5Q8TC36 379 aa12.64□□□□□ -0.39
CCDC94-201ENST00000262962 PRR25Q96S07 402 aa12.64□□□□□ -0.39
CCDC94-201ENST00000262962 TRAV8-2A0A0B4J237 113 aa12.63□□□□□ -0.39
CCDC94-201ENST00000262962 NDUFB4O95168 129 aa12.63□□□□□ -0.39
CCDC94-201ENST00000262962 CD7P09564 240 aa12.63□□□□□ -0.39
CCDC94-201ENST00000262962 ZNF688P0C7X2 276 aa12.63□□□□□ -0.39
CCDC94-201ENST00000262962 BLOC1S1P78537 153 aa12.63□□□□□ -0.39
CCDC94-201ENST00000262962 PSG9Q00887 426 aa12.63□□□□□ -0.39
CCDC94-201ENST00000262962 ODF3L2Q3SX64 289 aa12.63□□□□□ -0.39
CCDC94-201ENST00000262962 IQCF2Q8IXL9 164 aa12.63□□□□□ -0.39
CCDC94-201ENST00000262962 MAP6D1Q9H9H5 199 aa12.63□□□□□ -0.39
CCDC94-201ENST00000262962 CLEC5AQ9NY25 188 aa12.63□□□□□ -0.39
CCDC94-201ENST00000262962 TRAV1-1A0A0B4J248 108 aa12.62□□□□□ -0.39
CCDC94-201ENST00000262962 OR11H12B2RN74 326 aa12.62□□□□□ -0.39
CCDC94-201ENST00000262962 TEX46H3BTG2 121 aa12.62□□□□□ -0.39
CCDC94-201ENST00000262962 HBE1P02100 147 aa12.62□□□□□ -0.39
CCDC94-201ENST00000262962 DEFA6Q01524 100 aa12.62□□□□□ -0.39
CCDC94-201ENST00000262962 LYPD1Q8N2G4 141 aa12.62□□□□□ -0.39
CCDC94-201ENST00000262962 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
CCDC94-201ENST00000262962 TMPRSS5Q9H3S3 457 aa12.62□□□□□ -0.39
CCDC94-201ENST00000262962 AAMDCQ9H7C9 122 aa12.62□□□□□ -0.39
CCDC94-201ENST00000262962 C19orf73Q9NVV2 129 aa12.62□□□□□ -0.39
CCDC94-201ENST00000262962 UBQLN2Q9UHD9 624 aa12.62□□□□□ -0.39
CCDC94-201ENST00000262962 PRB2P02812 416 aaPredicted RBP12.61□□□□□ -0.39
CCDC94-201ENST00000262962 DEFB131AP59861 70 aa12.61□□□□□ -0.39
CCDC94-201ENST00000262962 IGFL4Q6B9Z1 124 aa12.61□□□□□ -0.39
CCDC94-201ENST00000262962 Q8N1Y9 231 aa12.61□□□□□ -0.39
CCDC94-201ENST00000262962 RNF182Q8N6D2 247 aa12.61□□□□□ -0.39
CCDC94-201ENST00000262962 LINC00052Q96N35 136 aa12.61□□□□□ -0.39
CCDC94-201ENST00000262962 A0A1B0GV50 99 aa12.6□□□□□ -0.39
CCDC94-201ENST00000262962 RANP62826 216 aaKnown RBP12.6□□□□□ -0.39
CCDC94-201ENST00000262962 PSG3Q16557 428 aa12.6□□□□□ -0.39
CCDC94-201ENST00000262962 C20orf173Q96LM9 149 aa12.6□□□□□ -0.39
CCDC94-201ENST00000262962 Q9H3A6 140 aa12.6□□□□□ -0.39
CCDC94-201ENST00000262962 PRELID1Q9Y255 219 aa12.6□□□□□ -0.39
CCDC94-201ENST00000262962 MEGF8Q7Z7M0 2845 aa12.6□□□□□ -0.39
CCDC94-201ENST00000262962 HLA-DMBP28068 263 aa12.59□□□□□ -0.39
CCDC94-201ENST00000262962 PPT1P50897 306 aa12.59□□□□□ -0.39
CCDC94-201ENST00000262962 EXOC3-AS1Q8N2X6 119 aa12.59□□□□□ -0.39
CCDC94-201ENST00000262962 ZNF738Q8NE65 137 aa12.59□□□□□ -0.39
CCDC94-201ENST00000262962 MRPL53Q96EL3 112 aaKnown RBP12.59□□□□□ -0.39
CCDC94-201ENST00000262962 OTORQ9NRC9 128 aa12.59□□□□□ -0.39
CCDC94-201ENST00000262962 AURKAIP1Q9NWT8 199 aaPredicted RBP12.59□□□□□ -0.39
CCDC94-201ENST00000262962 ARL2-SNX15V9GYD0 113 aa12.59□□□□□ -0.39
CCDC94-201ENST00000262962 A0A1W2PRE2 83 aa12.58□□□□□ -0.4
CCDC94-201ENST00000262962 ICAM4Q14773 271 aa12.58□□□□□ -0.4
CCDC94-201ENST00000262962 APRG1Q8IVJ8 170 aa12.58□□□□□ -0.4
CCDC94-201ENST00000262962 IFITM2Q01629 132 aa12.57□□□□□ -0.4
CCDC94-201ENST00000262962 ZNF767PQ75MW2 155 aa12.57□□□□□ -0.4
CCDC94-201ENST00000262962 DEFB125Q8N687 156 aa12.57□□□□□ -0.4
CCDC94-201ENST00000262962 LYPD6BQ8NI32 183 aa12.57□□□□□ -0.4
CCDC94-201ENST00000262962 NKX6-2Q9C056 277 aaPredicted RBP12.57□□□□□ -0.4
CCDC94-201ENST00000262962 WFDC10AQ9H1F0 79 aa12.57□□□□□ -0.4
CCDC94-201ENST00000262962 AGRNO00468 2067 aa12.57□□□□□ -0.4
CCDC94-201ENST00000262962 PGPA6NDG6 321 aa12.56□□□□□ -0.4
CCDC94-201ENST00000262962 FAM74A7A6NL05 159 aa12.56□□□□□ -0.4
CCDC94-201ENST00000262962 UBE2G2P60604 165 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms