RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 OR10AG1Q8NH19 301 aa13.82□□□□□ -0.2
TRAM1-201ENST00000262213 IGHV1-3A0A0C4DH29 117 aa13.81□□□□□ -0.2
TRAM1-201ENST00000262213 D6R8Y8 96 aa13.81□□□□□ -0.2
TRAM1-201ENST00000262213 CD5LO43866 347 aa13.81□□□□□ -0.2
TRAM1-201ENST00000262213 IGKV1-17P01599 117 aa13.81□□□□□ -0.2
TRAM1-201ENST00000262213 COX8AP10176 69 aa13.81□□□□□ -0.2
TRAM1-201ENST00000262213 ANKRD39Q53RE8 183 aa13.81□□□□□ -0.2
TRAM1-201ENST00000262213 KLF17Q5JT82 389 aaPredicted RBP13.81□□□□□ -0.2
TRAM1-201ENST00000262213 BCL6BQ8N143 479 aaPredicted RBP13.81□□□□□ -0.2
TRAM1-201ENST00000262213 TRBV19A0A075B6N1 114 aa13.81□□□□□ -0.2
TRAM1-201ENST00000262213 FCGR2BP31994 310 aaPredicted RBP13.81□□□□□ -0.2
TRAM1-201ENST00000262213 WFDC3Q8IUB2 231 aa13.81□□□□□ -0.2
TRAM1-201ENST00000262213 A0A0G2JNJ9 132 aa13.8□□□□□ -0.2
TRAM1-201ENST00000262213 THBDP07204 575 aa13.8□□□□□ -0.2
TRAM1-201ENST00000262213 S100A7P31151 101 aa13.8□□□□□ -0.2
TRAM1-201ENST00000262213 Q9UFV3 132 aa13.8□□□□□ -0.2
TRAM1-201ENST00000262213 HILPDAQ9Y5L2 63 aa13.8□□□□□ -0.2
TRAM1-201ENST00000262213 IL4P05112 153 aa13.8□□□□□ -0.2
TRAM1-201ENST00000262213 CRYGBP07316 175 aa13.8□□□□□ -0.2
TRAM1-201ENST00000262213 AMN1Q8IY45 258 aa13.8□□□□□ -0.2
TRAM1-201ENST00000262213 SCNM1Q9BWG6 230 aa13.8□□□□□ -0.2
TRAM1-201ENST00000262213 CSMD1Q96PZ7 3565 aa13.8□□□□□ -0.2
TRAM1-201ENST00000262213 ARHGAP32A7KAX9 2087 aa13.79□□□□□ -0.2
TRAM1-201ENST00000262213 GAGE12BA1L429 117 aa13.79□□□□□ -0.2
TRAM1-201ENST00000262213 I3L2K1 104 aa13.79□□□□□ -0.2
TRAM1-201ENST00000262213 PVRIGQ6DKI7 326 aa13.79□□□□□ -0.2
TRAM1-201ENST00000262213 TMEM14CQ9P0S9 112 aa13.79□□□□□ -0.2
TRAM1-201ENST00000262213 SMKR1H3BMG3 65 aa13.79□□□□□ -0.2
TRAM1-201ENST00000262213 K7EQM0 130 aa13.79□□□□□ -0.2
TRAM1-201ENST00000262213 TNFRSF13BO14836 293 aaPredicted RBP13.79□□□□□ -0.2
TRAM1-201ENST00000262213 CEACAM4O75871 244 aa13.79□□□□□ -0.2
TRAM1-201ENST00000262213 TMEM97Q5BJF2 176 aa13.79□□□□□ -0.2
TRAM1-201ENST00000262213 LYZL1Q6UWQ5 148 aa13.79□□□□□ -0.2
TRAM1-201ENST00000262213 C8orf31Q8N9H6 132 aa13.79□□□□□ -0.2
TRAM1-201ENST00000262213 RNASE6Q93091 150 aaKnown RBP13.79□□□□□ -0.2
TRAM1-201ENST00000262213 RPEQ96AT9 228 aa13.79□□□□□ -0.2
TRAM1-201ENST00000262213 CACNG7P62955 275 aa13.78□□□□□ -0.2
TRAM1-201ENST00000262213 PSG3Q16557 428 aa13.78□□□□□ -0.2
TRAM1-201ENST00000262213 SIGLEC15Q6ZMC9 328 aa13.78□□□□□ -0.2
TRAM1-201ENST00000262213 FAM57AQ8TBR7 257 aa13.78□□□□□ -0.2
TRAM1-201ENST00000262213 SIGLEC8Q9NYZ4 499 aa13.78□□□□□ -0.2
TRAM1-201ENST00000262213 ATMQ13315 3056 aa13.78□□□□□ -0.2
TRAM1-201ENST00000262213 ANKRD11Q6UB99 2663 aaPredicted RBP13.78□□□□□ -0.2
TRAM1-201ENST00000262213 C16orf54Q6UWD8 224 aa13.78□□□□□ -0.2
TRAM1-201ENST00000262213 Q6ZS92 163 aa13.78□□□□□ -0.2
TRAM1-201ENST00000262213 SHANK2-AS3Q9BTD1 123 aa13.78□□□□□ -0.2
TRAM1-201ENST00000262213 PEF1Q9UBV8 284 aaKnown RBP13.78□□□□□ -0.2
TRAM1-201ENST00000262213 CT45A10P0DMU9 189 aa13.77□□□□□ -0.2
TRAM1-201ENST00000262213 ASCL5Q7RTU5 278 aa13.77□□□□□ -0.2
TRAM1-201ENST00000262213 TMEM75Q8N9X5 138 aa13.77□□□□□ -0.2
TRAM1-201ENST00000262213 A0A096LNJ9 63 aa13.77□□□□□ -0.21
TRAM1-201ENST00000262213 BUB1B-PAK6H3BSN5 160 aa13.77□□□□□ -0.21
TRAM1-201ENST00000262213 RBPJQ06330 500 aa13.77□□□□□ -0.21
TRAM1-201ENST00000262213 RAB37Q96AX2 223 aa13.77□□□□□ -0.21
TRAM1-201ENST00000262213 PRELID3AQ96N28 172 aa13.77□□□□□ -0.21
TRAM1-201ENST00000262213 RABAC1Q9UI14 185 aa13.77□□□□□ -0.21
TRAM1-201ENST00000262213 HOXB4P17483 251 aaPredicted RBP13.77□□□□□ -0.21
TRAM1-201ENST00000262213 THYN1Q9P016 225 aa13.77□□□□□ -0.21
TRAM1-201ENST00000262213 AKAP13Q12802 2813 aa13.77□□□□□ -0.21
TRAM1-201ENST00000262213 PRSS57Q6UWY2 283 aa13.76□□□□□ -0.21
TRAM1-201ENST00000262213 PIP4P1Q86T03 277 aa13.76□□□□□ -0.21
TRAM1-201ENST00000262213 PIP4P2Q8N4L2 257 aa13.76□□□□□ -0.21
TRAM1-201ENST00000262213 AP1S3Q96PC3 154 aa13.76□□□□□ -0.21
TRAM1-201ENST00000262213 ABCA4P78363 2273 aa13.76□□□□□ -0.21
TRAM1-201ENST00000262213 RIF1Q5UIP0 2472 aaKnown RBP13.76□□□□□ -0.21
TRAM1-201ENST00000262213 GAGE10A6NGK3 116 aa13.76□□□□□ -0.21
TRAM1-201ENST00000262213 K7EIM0 57 aa13.76□□□□□ -0.21
TRAM1-201ENST00000262213 RNF125Q96EQ8 232 aa13.76□□□□□ -0.21
TRAM1-201ENST00000262213 TMEM189A5PLL7 270 aa13.75□□□□□ -0.21
TRAM1-201ENST00000262213 H3BRN7 92 aa13.75□□□□□ -0.21
TRAM1-201ENST00000262213 WNK2Q9Y3S1 2297 aa13.75□□□□□ -0.21
TRAM1-201ENST00000262213 IGKV2-40A0A087WW87 121 aaPredicted RBP13.75□□□□□ -0.21
TRAM1-201ENST00000262213 SAP30O75446 220 aa13.75□□□□□ -0.21
TRAM1-201ENST00000262213 IGKV2D-40P01614 121 aaPredicted RBP13.75□□□□□ -0.21
TRAM1-201ENST00000262213 IGLV1-47P01700 117 aa13.75□□□□□ -0.21
TRAM1-201ENST00000262213 IGHV3-23P01764 117 aa13.75□□□□□ -0.21
TRAM1-201ENST00000262213 IGFL4Q6B9Z1 124 aa13.75□□□□□ -0.21
TRAM1-201ENST00000262213 ZNF491Q8N8L2 437 aa13.75□□□□□ -0.21
TRAM1-201ENST00000262213 ZNF414Q96IQ9 312 aa13.75□□□□□ -0.21
TRAM1-201ENST00000262213 H3BUT2 72 aa13.74□□□□□ -0.21
TRAM1-201ENST00000262213 NMUP48645 174 aa13.74□□□□□ -0.21
TRAM1-201ENST00000262213 TM4SF20Q53R12 229 aa13.74□□□□□ -0.21
TRAM1-201ENST00000262213 RALYQ9UKM9 306 aaKnown RBP13.74□□□□□ -0.21
TRAM1-201ENST00000262213 E7EQL1 145 aa13.74□□□□□ -0.21
TRAM1-201ENST00000262213 IGHV3OR16-8A0A075B7F1 116 aa13.73□□□□□ -0.21
TRAM1-201ENST00000262213 SH2D1AO60880 128 aa13.73□□□□□ -0.21
TRAM1-201ENST00000262213 PPBPP02775 128 aa13.73□□□□□ -0.21
TRAM1-201ENST00000262213 Q8TAT8 98 aa13.73□□□□□ -0.21
TRAM1-201ENST00000262213 C18orf15Q96N68 181 aa13.73□□□□□ -0.21
TRAM1-201ENST00000262213 PRRG2O14669 202 aa13.73□□□□□ -0.21
TRAM1-201ENST00000262213 TIMM23O14925 209 aa13.73□□□□□ -0.21
TRAM1-201ENST00000262213 FGF6P10767 208 aa13.73□□□□□ -0.21
TRAM1-201ENST00000262213 TCF15Q12870 199 aa13.73□□□□□ -0.21
TRAM1-201ENST00000262213 IGFL3Q6UXB1 125 aa13.73□□□□□ -0.21
TRAM1-201ENST00000262213 JMJD8Q96S16 334 aa13.73□□□□□ -0.21
TRAM1-201ENST00000262213 ONECUT1Q9UBC0 465 aa13.73□□□□□ -0.21
TRAM1-201ENST00000262213 VSTM5A8MXK1 200 aa13.72□□□□□ -0.21
TRAM1-201ENST00000262213 GNG7O60262 68 aa13.72□□□□□ -0.21
TRAM1-201ENST00000262213 MRPL51Q4U2R6 128 aaKnown RBP13.72□□□□□ -0.21
TRAM1-201ENST00000262213 ORMDL3Q8N138 153 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms