RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 FAM120AOSQ5T036 256 aa15.08■□□□□ 0
COL4A3BP-201ENST00000261415 ZNF833PQ6ZTB9 187 aa15.08■□□□□ 0
COL4A3BP-201ENST00000261415 Q96MF0 132 aa15.08■□□□□ 0
COL4A3BP-201ENST00000261415 MAP1LC3CQ9BXW4 147 aa15.08■□□□□ 0
COL4A3BP-201ENST00000261415 RNF223E7ERA6 249 aa15.07■□□□□ 0
COL4A3BP-201ENST00000261415 MSMBP08118 114 aa15.07■□□□□ 0
COL4A3BP-201ENST00000261415 KLRD1Q13241 179 aa15.07■□□□□ 0
COL4A3BP-201ENST00000261415 FXYD3Q14802 87 aa15.07■□□□□ 0
COL4A3BP-201ENST00000261415 PDLIM3Q53GG5 364 aaPredicted RBP15.07■□□□□ 0
COL4A3BP-201ENST00000261415 CCDC144NLQ6NUI1 221 aa15.07■□□□□ 0
COL4A3BP-201ENST00000261415 PQLC2Q6ZP29 291 aa15.07■□□□□ 0
COL4A3BP-201ENST00000261415 TSSC4Q9Y5U2 329 aaPredicted RBP15.07■□□□□ 0
COL4A3BP-201ENST00000261415 ZANQ9Y493 2812 aa15.07■□□□□ 0
COL4A3BP-201ENST00000261415 RRHO14718 337 aa15.06■□□□□ 0
COL4A3BP-201ENST00000261415 FABP2P12104 132 aa15.06■□□□□ 0
COL4A3BP-201ENST00000261415 ZNF137PP52743 207 aa15.06■□□□□ 0
COL4A3BP-201ENST00000261415 LOXL1Q08397 574 aaPredicted RBP15.06■□□□□ 0
COL4A3BP-201ENST00000261415 HCP5Q6MZN7 132 aa15.06■□□□□ 0
COL4A3BP-201ENST00000261415 FOXI2Q6ZQN5 318 aa15.06■□□□□ 0
COL4A3BP-201ENST00000261415 OR11H6Q8NGC7 330 aa15.06■□□□□ 0
COL4A3BP-201ENST00000261415 GEMIN7Q9H840 131 aaKnown RBP15.06■□□□□ 0
COL4A3BP-201ENST00000261415 CELSR1Q9NYQ6 3014 aa15.06■□□□□ 0
COL4A3BP-201ENST00000261415 B4DSR2 109 aa15.06■□□□□ 0
COL4A3BP-201ENST00000261415 MGST1P10620 155 aaKnown RBP15.06■□□□□ 0
COL4A3BP-201ENST00000261415 BRWD1-AS2P59051 145 aa15.06■□□□□ 0
COL4A3BP-201ENST00000261415 C1orf159Q96HA4 380 aa15.06■□□□□ 0
COL4A3BP-201ENST00000261415 ZNF257Q9Y2Q1 563 aa15.06■□□□□ 0
COL4A3BP-201ENST00000261415 SVEP1Q4LDE5 3571 aa15.05■□□□□ 0
COL4A3BP-201ENST00000261415 CREBBPQ92793 2442 aa15.05■□□□□ 0
COL4A3BP-201ENST00000261415 RPL8P62917 257 aaKnown RBP15.05■□□□□ 0
COL4A3BP-201ENST00000261415 MAPK1IP1LQ8NDC0 245 aa15.05■□□□□ 0
COL4A3BP-201ENST00000261415 SERTAD4Q9NUC0 356 aa15.05■□□□□ 0
COL4A3BP-201ENST00000261415 HOXB4P17483 251 aaPredicted RBP15.05■□□□□ -0
COL4A3BP-201ENST00000261415 DIAPH2-AS1Q14236 149 aa15.05■□□□□ -0
COL4A3BP-201ENST00000261415 KIR3DS1Q14943 382 aa15.05■□□□□ -0
COL4A3BP-201ENST00000261415 DDB2Q92466 427 aa15.05■□□□□ -0
COL4A3BP-201ENST00000261415 GRAMD2BQ96HH9 432 aa15.05■□□□□ -0
COL4A3BP-201ENST00000261415 BUB1B-PAK6H3BSN5 160 aa15.04■□□□□ -0
COL4A3BP-201ENST00000261415 PAX8Q06710 450 aa15.04■□□□□ -0
COL4A3BP-201ENST00000261415 ADTRPQ96IZ2 230 aa15.04■□□□□ -0
COL4A3BP-201ENST00000261415 ODF3BA8MYP8 253 aa15.04■□□□□ -0
COL4A3BP-201ENST00000261415 CT45A6P0DMU7 189 aa15.04■□□□□ -0
COL4A3BP-201ENST00000261415 CT45A5P0DMU8 189 aa15.04■□□□□ -0
COL4A3BP-201ENST00000261415 CT45A7P0DMV0 189 aa15.04■□□□□ -0
COL4A3BP-201ENST00000261415 DPF1Q92782 380 aa15.04■□□□□ -0
COL4A3BP-201ENST00000261415 AMMECR1Q9Y4X0 333 aaPredicted RBP15.04■□□□□ -0
COL4A3BP-201ENST00000261415 OR11H12B2RN74 326 aa15.03■□□□□ -0
COL4A3BP-201ENST00000261415 FCGR3BO75015 233 aa15.03■□□□□ -0
COL4A3BP-201ENST00000261415 OR9G9P0C7N8 305 aa15.03■□□□□ -0
COL4A3BP-201ENST00000261415 P0C879 139 aa15.03■□□□□ -0
COL4A3BP-201ENST00000261415 ZNF816Q0VGE8 651 aaPredicted RBP15.03■□□□□ -0
COL4A3BP-201ENST00000261415 OR11H1Q8NG94 326 aa15.03■□□□□ -0
COL4A3BP-201ENST00000261415 OR11H2Q8NH07 326 aa15.03■□□□□ -0
COL4A3BP-201ENST00000261415 ZNF479Q96JC4 524 aa15.03■□□□□ -0
COL4A3BP-201ENST00000261415 MRPL20Q9BYC9 149 aaKnown RBP15.03■□□□□ -0
COL4A3BP-201ENST00000261415 ZNF469Q96JG9 3925 aaPredicted RBP15.03■□□□□ -0
COL4A3BP-201ENST00000261415 TSPAN13O95857 204 aa15.03■□□□□ -0
COL4A3BP-201ENST00000261415 MFAP2P55001 183 aa15.03■□□□□ -0
COL4A3BP-201ENST00000261415 LINC01356Q8N9X3 169 aa15.03■□□□□ -0
COL4A3BP-201ENST00000261415 FOXC2Q99958 501 aa15.03■□□□□ -0
COL4A3BP-201ENST00000261415 HSPB8Q9UJY1 196 aa15.03■□□□□ -0
COL4A3BP-201ENST00000261415 IGHV1-24A0A0C4DH33 117 aa15.02□□□□□ -0.01
COL4A3BP-201ENST00000261415 WFDC11Q8NEX6 87 aa15.02□□□□□ -0.01
COL4A3BP-201ENST00000261415 OR4A16Q8NH70 328 aa15.02□□□□□ -0.01
COL4A3BP-201ENST00000261415 KIR2DS2P43631 304 aa15.01□□□□□ -0.01
COL4A3BP-201ENST00000261415 ATP5L2Q7Z4Y8 100 aa15.01□□□□□ -0.01
COL4A3BP-201ENST00000261415 URB1-AS1Q96HZ7 61 aa15.01□□□□□ -0.01
COL4A3BP-201ENST00000261415 HIF1ANQ9NWT6 349 aa15.01□□□□□ -0.01
COL4A3BP-201ENST00000261415 ABCA1O95477 2261 aa15.01□□□□□ -0.01
COL4A3BP-201ENST00000261415 A0A1W2PRD5 423 aa15.01□□□□□ -0.01
COL4A3BP-201ENST00000261415 A0A1W2PRF3 423 aa15.01□□□□□ -0.01
COL4A3BP-201ENST00000261415 A0A1W2PRM7 423 aa15.01□□□□□ -0.01
COL4A3BP-201ENST00000261415 BLNKQ8WV28 456 aa15.01□□□□□ -0.01
COL4A3BP-201ENST00000261415 NABP2Q9BQ15 211 aa15.01□□□□□ -0.01
COL4A3BP-201ENST00000261415 MRPL16Q9NX20 251 aaKnown RBP15.01□□□□□ -0.01
COL4A3BP-201ENST00000261415 AKAP9Q99996 3911 aa15□□□□□ -0.01
COL4A3BP-201ENST00000261415 LY6LH3BQJ8 138 aa15□□□□□ -0.01
COL4A3BP-201ENST00000261415 RPS16P62249 146 aaKnown RBP15□□□□□ -0.01
COL4A3BP-201ENST00000261415 LINC01545Q5VT33 79 aa15□□□□□ -0.01
COL4A3BP-201ENST00000261415 ZDHHC16Q969W1 377 aa15□□□□□ -0.01
COL4A3BP-201ENST00000261415 TMEM167BQ9NRX6 74 aa15□□□□□ -0.01
COL4A3BP-201ENST00000261415 FLNAP21333 2647 aaKnown RBP15□□□□□ -0.01
COL4A3BP-201ENST00000261415 C15orf62A8K5M9 175 aa15□□□□□ -0.01
COL4A3BP-201ENST00000261415 SIVA1O15304 175 aa15□□□□□ -0.01
COL4A3BP-201ENST00000261415 UBE2E1P51965 193 aa15□□□□□ -0.01
COL4A3BP-201ENST00000261415 OR9G4Q8NGQ1 327 aa15□□□□□ -0.01
COL4A3BP-201ENST00000261415 RPEQ96AT9 228 aa15□□□□□ -0.01
COL4A3BP-201ENST00000261415 GGTLC1Q9BX51 225 aa15□□□□□ -0.01
COL4A3BP-201ENST00000261415 TET2Q6N021 2002 aaPredicted RBP14.99□□□□□ -0.01
COL4A3BP-201ENST00000261415 G6PCP35575 357 aa14.99□□□□□ -0.01
COL4A3BP-201ENST00000261415 TREML4Q6UXN2 200 aa14.99□□□□□ -0.01
COL4A3BP-201ENST00000261415 OR5AN1Q8NGI8 311 aa14.99□□□□□ -0.01
COL4A3BP-201ENST00000261415 PGPEP1Q9NXJ5 209 aa14.99□□□□□ -0.01
COL4A3BP-201ENST00000261415 DPM3Q9P2X0 92 aa14.99□□□□□ -0.01
COL4A3BP-201ENST00000261415 SELENOKQ9Y6D0 94 aa14.99□□□□□ -0.01
COL4A3BP-201ENST00000261415 TEX15Q9BXT5 2789 aa14.99□□□□□ -0.01
COL4A3BP-201ENST00000261415 GATA3P23771 443 aa14.99□□□□□ -0.01
COL4A3BP-201ENST00000261415 NHLRC2Q8NBF2 726 aa14.99□□□□□ -0.01
COL4A3BP-201ENST00000261415 C7orf69Q9H7B7 122 aa14.99□□□□□ -0.01
COL4A3BP-201ENST00000261415 F8W1H4 67 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms