RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 HIVEP1P15822 2718 aa11.65□□□□□ -0.54
HDHD3-201ENST00000238379 COLCA2A8K830 154 aa11.65□□□□□ -0.55
HDHD3-201ENST00000238379 K7EN84 100 aa11.65□□□□□ -0.55
HDHD3-201ENST00000238379 MT-ND4LP03901 98 aa11.65□□□□□ -0.55
HDHD3-201ENST00000238379 LGALS1P09382 135 aaKnown RBP11.65□□□□□ -0.55
HDHD3-201ENST00000238379 HILS1P60008 231 aa11.65□□□□□ -0.55
HDHD3-201ENST00000238379 TRAV34A0A0B4J273 112 aa11.64□□□□□ -0.55
HDHD3-201ENST00000238379 ZNF320A2RRD8 509 aa11.64□□□□□ -0.55
HDHD3-201ENST00000238379 CXorf65A6NEN9 183 aa11.64□□□□□ -0.55
HDHD3-201ENST00000238379 ISLRO14498 428 aa11.64□□□□□ -0.55
HDHD3-201ENST00000238379 IGLV2-8P01709 118 aa11.64□□□□□ -0.55
HDHD3-201ENST00000238379 CD99P14209 185 aa11.64□□□□□ -0.55
HDHD3-201ENST00000238379 FOSL1P15407 271 aa11.64□□□□□ -0.55
HDHD3-201ENST00000238379 TMEM183BQ1AE95 376 aa11.64□□□□□ -0.55
HDHD3-201ENST00000238379 GPHB5Q86YW7 130 aa11.64□□□□□ -0.55
HDHD3-201ENST00000238379 YPEL4Q96NS1 127 aa11.64□□□□□ -0.55
HDHD3-201ENST00000238379 PRELID1Q9Y255 219 aa11.64□□□□□ -0.55
HDHD3-201ENST00000238379 A0A087X0K7 114 aa11.63□□□□□ -0.55
HDHD3-201ENST00000238379 ZNF253O75346 499 aa11.63□□□□□ -0.55
HDHD3-201ENST00000238379 ATF4P18848 351 aaPredicted RBP11.63□□□□□ -0.55
HDHD3-201ENST00000238379 TCTEX1D4Q5JR98 221 aa11.63□□□□□ -0.55
HDHD3-201ENST00000238379 C16orf54Q6UWD8 224 aa11.63□□□□□ -0.55
HDHD3-201ENST00000238379 C15orf54Q8N8G6 183 aa11.63□□□□□ -0.55
HDHD3-201ENST00000238379 CMTM2Q8TAZ6 248 aa11.63□□□□□ -0.55
HDHD3-201ENST00000238379 RPH3ALQ9UNE2 315 aa11.63□□□□□ -0.55
HDHD3-201ENST00000238379 CRYBA1P05813 215 aa11.63□□□□□ -0.55
HDHD3-201ENST00000238379 GALR1P47211 349 aa11.63□□□□□ -0.55
HDHD3-201ENST00000238379 PSG9Q00887 426 aa11.63□□□□□ -0.55
HDHD3-201ENST00000238379 FAM106AQ4KMX7 169 aa11.63□□□□□ -0.55
HDHD3-201ENST00000238379 Q71RC1 249 aaPredicted RBP11.63□□□□□ -0.55
HDHD3-201ENST00000238379 GLMPQ8WWB7 406 aa11.63□□□□□ -0.55
HDHD3-201ENST00000238379 AAMDCQ9H7C9 122 aa11.63□□□□□ -0.55
HDHD3-201ENST00000238379 ZNF785A8K8V0 405 aa11.62□□□□□ -0.55
HDHD3-201ENST00000238379 M0R3E3 92 aa11.62□□□□□ -0.55
HDHD3-201ENST00000238379 FAM24BQ8N5W8 94 aa11.62□□□□□ -0.55
HDHD3-201ENST00000238379 WIPF2Q8TF74 440 aaPredicted RBP11.62□□□□□ -0.55
HDHD3-201ENST00000238379 ANAPC16Q96DE5 110 aa11.62□□□□□ -0.55
HDHD3-201ENST00000238379 ZNF331Q9NQX6 463 aaPredicted RBP11.62□□□□□ -0.55
HDHD3-201ENST00000238379 TMA7Q9Y2S6 64 aaKnown RBP11.62□□□□□ -0.55
HDHD3-201ENST00000238379 H7BYZ3 331 aa11.61□□□□□ -0.55
HDHD3-201ENST00000238379 K7EMT4 169 aa11.61□□□□□ -0.55
HDHD3-201ENST00000238379 S100A9P06702 114 aaKnown RBP11.61□□□□□ -0.55
HDHD3-201ENST00000238379 CDX1P47902 265 aaPredicted RBP11.61□□□□□ -0.55
HDHD3-201ENST00000238379 UBE2G1P62253 170 aa11.61□□□□□ -0.55
HDHD3-201ENST00000238379 TM4SF20Q53R12 229 aa11.61□□□□□ -0.55
HDHD3-201ENST00000238379 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.61□□□□□ -0.55
HDHD3-201ENST00000238379 BAGE2Q86Y30 109 aa11.61□□□□□ -0.55
HDHD3-201ENST00000238379 SFRP2Q96HF1 295 aa11.61□□□□□ -0.55
HDHD3-201ENST00000238379 SGK494Q96LW2 274 aa11.61□□□□□ -0.55
HDHD3-201ENST00000238379 C16orf95Q9H693 158 aa11.61□□□□□ -0.55
HDHD3-201ENST00000238379 DAZ1Q9NQZ3 744 aaKnown RBP11.61□□□□□ -0.55
HDHD3-201ENST00000238379 NSD1Q96L73 2696 aaPredicted RBP11.61□□□□□ -0.55
HDHD3-201ENST00000238379 IGLV2-11P01706 119 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 ELOBQ15370 118 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 RPEL1Q2QD12 228 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 GOLT1AQ6ZVE7 132 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 FMC1Q96HJ9 113 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 URGCP-MRPS24S4R325 110 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 IGHV4OR15-8A0A075B7B6 117 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 A0A087WW49 117 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 IGHV7-4-1A0A0J9YVY3 117 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 A0A1W2PS18 150 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 DIRC3C9JPN6 131 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 INAFM1C9JVW0 142 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 GCGP01275 180 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 OR5I1Q13606 314 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 ARL6IP6Q8N6S5 226 aa11.6□□□□□ -0.55
HDHD3-201ENST00000238379 TRAV8-1A0A0A6YYK1 113 aa11.59□□□□□ -0.55
HDHD3-201ENST00000238379 PPP1R2P9O14990 202 aa11.59□□□□□ -0.55
HDHD3-201ENST00000238379 MEOX2P50222 304 aa11.59□□□□□ -0.55
HDHD3-201ENST00000238379 C18orf65Q6ZTR6 163 aa11.59□□□□□ -0.55
HDHD3-201ENST00000238379 NHLRC2Q8NBF2 726 aa11.59□□□□□ -0.55
HDHD3-201ENST00000238379 LINC01006Q8NI28 216 aa11.59□□□□□ -0.55
HDHD3-201ENST00000238379 SMPXQ9UHP9 88 aa11.59□□□□□ -0.55
HDHD3-201ENST00000238379 LTAP01374 205 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 PFN1P07737 140 aaKnown RBP11.58□□□□□ -0.56
HDHD3-201ENST00000238379 HLA-DMBP28068 263 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 IGFL4Q6B9Z1 124 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 OR10G8Q8NGN5 311 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 SMIM12Q96EX1 92 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 GRAMD2BQ96HH9 432 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 JMJD8Q96S16 334 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 MLST8Q9BVC4 326 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 RHPN1-AS1Q9BWJ2 59 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 UFC1Q9Y3C8 167 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 TRBV6-1A0A0K0K1D8 114 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 CHEK1O14757 476 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 MGST1P10620 155 aaKnown RBP11.58□□□□□ -0.56
HDHD3-201ENST00000238379 EDN2P20800 178 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 HOXD3P31249 432 aaPredicted RBP11.58□□□□□ -0.56
HDHD3-201ENST00000238379 C8orf86Q6ZUL3 223 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 REC114Q7Z4M0 266 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 TMEM75Q8N9X5 138 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 C4orf3Q8WVX3 66 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 SLC50A1Q9BRV3 221 aa11.58□□□□□ -0.56
HDHD3-201ENST00000238379 TRAV8-2A0A0B4J237 113 aa11.57□□□□□ -0.56
HDHD3-201ENST00000238379 TMEM213A2RRL7 107 aa11.57□□□□□ -0.56
HDHD3-201ENST00000238379 K7EQM0 130 aa11.57□□□□□ -0.56
HDHD3-201ENST00000238379 LGALS9O00182 355 aa11.57□□□□□ -0.56
HDHD3-201ENST00000238379 PRB4P10163 310 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms