RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 LINC01587Q99440 93 aa13.84□□□□□ -0.19
SLC1A4-201ENST00000234256 PLA2G2EQ9NZK7 142 aa13.84□□□□□ -0.19
SLC1A4-201ENST00000234256 C15orf65H3BRN8 121 aa13.84□□□□□ -0.19
SLC1A4-201ENST00000234256 H3BUX3 64 aa13.84□□□□□ -0.19
SLC1A4-201ENST00000234256 CHCHD1Q96BP2 118 aaKnown RBP13.84□□□□□ -0.19
SLC1A4-201ENST00000234256 TOMM7Q9P0U1 55 aa13.84□□□□□ -0.19
SLC1A4-201ENST00000234256 NPFFO15130 113 aa13.83□□□□□ -0.19
SLC1A4-201ENST00000234256 WT1P19544 449 aaPredicted RBP13.83□□□□□ -0.19
SLC1A4-201ENST00000234256 CIRBPQ14011 172 aaKnown RBP13.83□□□□□ -0.19
SLC1A4-201ENST00000234256 CD300EQ496F6 205 aaPredicted RBP13.83□□□□□ -0.19
SLC1A4-201ENST00000234256 LY96Q9Y6Y9 160 aa13.83□□□□□ -0.19
SLC1A4-201ENST00000234256 IGHV2-5P01817 119 aa13.83□□□□□ -0.2
SLC1A4-201ENST00000234256 NUTF2P61970 127 aaKnown RBP13.83□□□□□ -0.2
SLC1A4-201ENST00000234256 GTSCR1Q86UQ5 136 aa13.83□□□□□ -0.2
SLC1A4-201ENST00000234256 BPESC1Q9GZL8 116 aa13.83□□□□□ -0.2
SLC1A4-201ENST00000234256 A0A0U1RRA0 63 aa13.83□□□□□ -0.2
SLC1A4-201ENST00000234256 DPM2O94777 84 aa13.83□□□□□ -0.2
SLC1A4-201ENST00000234256 PSMG4Q5JS54 123 aa13.83□□□□□ -0.2
SLC1A4-201ENST00000234256 HIVEP2P31629 2446 aa13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 PRRC2CQ9Y520 2896 aaKnown RBP13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 C19orf67A6NJJ6 358 aa13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 SH2D1AO60880 128 aa13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 DKK1O94907 266 aa13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 EFNA4P52798 201 aa13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 GUSBP1Q15486 140 aa13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 SIGLEC15Q6ZMC9 328 aa13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 NDUFA4L2Q9NRX3 87 aa13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 IGHV3-64A0A075B6Q5 118 aa13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 TMEM155Q4W5P6 130 aa13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 C5orf30Q96GV9 206 aa13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 ST20Q9HBF5 79 aa13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 FAM215AQ9Y5M1 114 aa13.82□□□□□ -0.2
SLC1A4-201ENST00000234256 SRSF1Q07955 248 aaKnown RBP eCLIP13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 FAM169BQ8N8A8 192 aa13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 H7C1H1 209 aa13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 BEND2Q8NDZ0 799 aa13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 SLX1AQ9BQ83 275 aa13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 TMEM262E9PQX1 116 aa13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 TMEM249Q2WGJ8 235 aa13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 OR2K2Q8NGT1 345 aa13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 SSC4DQ8WTU2 575 aa13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 IGLV3-9A0A075B6K5 115 aa13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 SYS1-DBNDD2H3BUS1 97 aa13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 LOXP28300 417 aaPredicted RBP13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 OR13C6PQ8NH95 151 aa13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 ORAOV1Q8WV07 137 aa13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 POLR3KQ9Y2Y1 108 aaPredicted RBP13.81□□□□□ -0.2
SLC1A4-201ENST00000234256 A8MWP6 167 aa13.8□□□□□ -0.2
SLC1A4-201ENST00000234256 JMJD1CQ15652 2540 aa13.8□□□□□ -0.2
SLC1A4-201ENST00000234256 F2Z2F3 143 aa13.8□□□□□ -0.2
SLC1A4-201ENST00000234256 DLEU1O43261 78 aa13.8□□□□□ -0.2
SLC1A4-201ENST00000234256 SAA4P35542 130 aa13.8□□□□□ -0.2
SLC1A4-201ENST00000234256 ERCC8Q13216 396 aa13.8□□□□□ -0.2
SLC1A4-201ENST00000234256 C18orf32Q8TCD1 76 aa13.8□□□□□ -0.2
SLC1A4-201ENST00000234256 VCX2Q9H322 139 aa13.8□□□□□ -0.2
SLC1A4-201ENST00000234256 COL4A3Q01955 1670 aa13.8□□□□□ -0.2
SLC1A4-201ENST00000234256 PSG3Q16557 428 aa13.8□□□□□ -0.2
SLC1A4-201ENST00000234256 CYSLTR1Q9Y271 337 aa13.8□□□□□ -0.2
SLC1A4-201ENST00000234256 ITGB1BP1O14713 200 aa13.79□□□□□ -0.2
SLC1A4-201ENST00000234256 CDPF1Q6NVV7 123 aa13.79□□□□□ -0.2
SLC1A4-201ENST00000234256 Q8NFD4 153 aa13.79□□□□□ -0.2
SLC1A4-201ENST00000234256 TMEM213A2RRL7 107 aa13.79□□□□□ -0.2
SLC1A4-201ENST00000234256 TOMM40O96008 361 aa13.79□□□□□ -0.2
SLC1A4-201ENST00000234256 GNLYP22749 145 aa13.79□□□□□ -0.2
SLC1A4-201ENST00000234256 PRTN3P24158 256 aa13.79□□□□□ -0.2
SLC1A4-201ENST00000234256 IFI27P40305 119 aaPredicted RBP13.79□□□□□ -0.2
SLC1A4-201ENST00000234256 NAV3Q8IVL0 2385 aa13.79□□□□□ -0.2
SLC1A4-201ENST00000234256 Q86TA4 180 aa13.79□□□□□ -0.2
SLC1A4-201ENST00000234256 C14orf178Q8N769 122 aaPredicted RBP13.79□□□□□ -0.2
SLC1A4-201ENST00000234256 IGLV1-44P01699 117 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 RNF5Q99942 180 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 FCN3O75636 299 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 SMAGPQ0VAQ4 97 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 SLAQ13239 276 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 C11orf53Q8IXP5 236 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 STPG4Q8N801 248 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 ZFYVE26Q68DK2 2539 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 G3V318 75 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 IGKCP01834 107 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 CFHR2P36980 270 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 SPRNQ5BIV9 151 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 RNF138Q8WVD3 245 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 IGFBPL1Q8WX77 278 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 MOB4Q9Y3A3 225 aa13.78□□□□□ -0.2
SLC1A4-201ENST00000234256 KIF26AQ9ULI4 1882 aaPredicted RBP13.77□□□□□ -0.2
SLC1A4-201ENST00000234256 ZNF815PA8K554 130 aa13.77□□□□□ -0.2
SLC1A4-201ENST00000234256 K7EM74 188 aa13.77□□□□□ -0.2
SLC1A4-201ENST00000234256 NDUFB8O95169 186 aa13.77□□□□□ -0.2
SLC1A4-201ENST00000234256 PAX1P15863 534 aa13.77□□□□□ -0.2
SLC1A4-201ENST00000234256 GATA4P43694 442 aa13.77□□□□□ -0.2
SLC1A4-201ENST00000234256 TRGV2A0A075B6R0 118 aa13.77□□□□□ -0.21
SLC1A4-201ENST00000234256 PF4P02776 101 aa13.77□□□□□ -0.21
SLC1A4-201ENST00000234256 ZC2HC1BQ5TFG8 222 aa13.77□□□□□ -0.21
SLC1A4-201ENST00000234256 KIAA1671Q9BY89 1806 aa13.77□□□□□ -0.21
SLC1A4-201ENST00000234256 IGHV3-73A0A0B4J1V6 119 aa13.77□□□□□ -0.21
SLC1A4-201ENST00000234256 FNDC10F2Z333 226 aa13.77□□□□□ -0.21
SLC1A4-201ENST00000234256 WISP2O76076 250 aa13.77□□□□□ -0.21
SLC1A4-201ENST00000234256 RNF182Q8N6D2 247 aa13.77□□□□□ -0.21
SLC1A4-201ENST00000234256 OR4X2Q8NGF9 303 aa13.77□□□□□ -0.21
SLC1A4-201ENST00000234256 SNHG12Q9BXW3 62 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms