RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 SPRY3O43610 288 aa14.05□□□□□ -0.16
CDKN1B-201ENST00000228872 CRYGCP07315 174 aa14.05□□□□□ -0.16
CDKN1B-201ENST00000228872 DEFB108BQ8NET1 73 aa14.05□□□□□ -0.16
CDKN1B-201ENST00000228872 DSCAMO60469 2012 aa14.04□□□□□ -0.16
CDKN1B-201ENST00000228872 MAP1BP46821 2468 aaKnown RBP14.04□□□□□ -0.16
CDKN1B-201ENST00000228872 FXYD7P58549 80 aa14.04□□□□□ -0.16
CDKN1B-201ENST00000228872 EXOC3-AS1Q8N2X6 119 aa14.04□□□□□ -0.16
CDKN1B-201ENST00000228872 OR10X1Q8NGY0 326 aa14.04□□□□□ -0.16
CDKN1B-201ENST00000228872 FAM57AQ8TBR7 257 aa14.04□□□□□ -0.16
CDKN1B-201ENST00000228872 BSNQ9UPA5 3926 aa14.04□□□□□ -0.16
CDKN1B-201ENST00000228872 DYSFO75923 2080 aa14.04□□□□□ -0.16
CDKN1B-201ENST00000228872 PSG3Q16557 428 aa14.04□□□□□ -0.16
CDKN1B-201ENST00000228872 FAM216BQ8N7L0 139 aa14.04□□□□□ -0.16
CDKN1B-201ENST00000228872 CCL13Q99616 98 aa14.04□□□□□ -0.16
CDKN1B-201ENST00000228872 PROCRQ9UNN8 238 aa14.04□□□□□ -0.16
CDKN1B-201ENST00000228872 FAM215AQ9Y5M1 114 aa14.04□□□□□ -0.16
CDKN1B-201ENST00000228872 TRBV6-1A0A0K0K1D8 114 aa14.03□□□□□ -0.16
CDKN1B-201ENST00000228872 A0A1W2PPI3 338 aa14.03□□□□□ -0.16
CDKN1B-201ENST00000228872 C8orf46Q8TAG6 207 aa14.03□□□□□ -0.16
CDKN1B-201ENST00000228872 CLUHP3Q96NS8 147 aa14.03□□□□□ -0.16
CDKN1B-201ENST00000228872 TPPP3Q9BW30 176 aa14.03□□□□□ -0.16
CDKN1B-201ENST00000228872 U3KQK5 164 aa14.03□□□□□ -0.16
CDKN1B-201ENST00000228872 HBDP02042 147 aa14.03□□□□□ -0.16
CDKN1B-201ENST00000228872 FXYD2P54710 66 aa14.03□□□□□ -0.16
CDKN1B-201ENST00000228872 ZNF493Q6ZR52 646 aa14.03□□□□□ -0.16
CDKN1B-201ENST00000228872 IFI27L1Q96BM0 104 aa14.03□□□□□ -0.16
CDKN1B-201ENST00000228872 PRELID3AQ96N28 172 aa14.03□□□□□ -0.16
CDKN1B-201ENST00000228872 ASCL2Q99929 193 aa14.03□□□□□ -0.16
CDKN1B-201ENST00000228872 TANC2Q9HCD6 1990 aa14.03□□□□□ -0.16
CDKN1B-201ENST00000228872 GCSHP23434 173 aa14.02□□□□□ -0.16
CDKN1B-201ENST00000228872 C18orf15Q96N68 181 aa14.02□□□□□ -0.16
CDKN1B-201ENST00000228872 ZNF71Q9NQZ8 489 aaPredicted RBP14.02□□□□□ -0.16
CDKN1B-201ENST00000228872 TSSC4Q9Y5U2 329 aaPredicted RBP14.02□□□□□ -0.16
CDKN1B-201ENST00000228872 NAV3Q8IVL0 2385 aa14.02□□□□□ -0.17
CDKN1B-201ENST00000228872 SERTM2A0A1B0GWG4 89 aa14.02□□□□□ -0.17
CDKN1B-201ENST00000228872 PAX8Q06710 450 aa14.02□□□□□ -0.17
CDKN1B-201ENST00000228872 HCP5Q6MZN7 132 aa14.02□□□□□ -0.17
CDKN1B-201ENST00000228872 IGLV2-23P01705 113 aa14.01□□□□□ -0.17
CDKN1B-201ENST00000228872 S100A7AQ86SG5 101 aa14.01□□□□□ -0.17
CDKN1B-201ENST00000228872 BCL6BQ8N143 479 aaPredicted RBP14.01□□□□□ -0.17
CDKN1B-201ENST00000228872 OR4C13Q8NGP0 309 aa14.01□□□□□ -0.17
CDKN1B-201ENST00000228872 VGLL1Q99990 258 aa14.01□□□□□ -0.17
CDKN1B-201ENST00000228872 CADP27708 2225 aa14.01□□□□□ -0.17
CDKN1B-201ENST00000228872 A0A1B0GV72 72 aa14.01□□□□□ -0.17
CDKN1B-201ENST00000228872 CD300EQ496F6 205 aaPredicted RBP14.01□□□□□ -0.17
CDKN1B-201ENST00000228872 Q6AWC8 147 aa14.01□□□□□ -0.17
CDKN1B-201ENST00000228872 RNF7Q9UBF6 113 aa14.01□□□□□ -0.17
CDKN1B-201ENST00000228872 DKK2Q9UBU2 259 aa14.01□□□□□ -0.17
CDKN1B-201ENST00000228872 HIGD1AQ9Y241 93 aa14.01□□□□□ -0.17
CDKN1B-201ENST00000228872 IGHV3-21A0A0B4J1V1 117 aa14□□□□□ -0.17
CDKN1B-201ENST00000228872 TPSG1Q9NRR2 321 aa14□□□□□ -0.17
CDKN1B-201ENST00000228872 GAGE12HA6NDE8 117 aa14□□□□□ -0.17
CDKN1B-201ENST00000228872 K7ERJ3 54 aa14□□□□□ -0.17
CDKN1B-201ENST00000228872 CT45A10P0DMU9 189 aa14□□□□□ -0.17
CDKN1B-201ENST00000228872 AMN1Q8IY45 258 aa14□□□□□ -0.17
CDKN1B-201ENST00000228872 ATP6V0BQ99437 205 aa14□□□□□ -0.17
CDKN1B-201ENST00000228872 CEP295Q9C0D2 2601 aa13.99□□□□□ -0.17
CDKN1B-201ENST00000228872 NDUFS7O75251 213 aa13.99□□□□□ -0.17
CDKN1B-201ENST00000228872 CRIP1P50238 77 aa13.99□□□□□ -0.17
CDKN1B-201ENST00000228872 FAM104BQ5XKR9 115 aa13.99□□□□□ -0.17
CDKN1B-201ENST00000228872 ZNF788Q6ZQV5 615 aa13.99□□□□□ -0.17
CDKN1B-201ENST00000228872 ORMDL3Q8N138 153 aa13.99□□□□□ -0.17
CDKN1B-201ENST00000228872 PHLDA1Q8WV24 401 aaPredicted RBP13.99□□□□□ -0.17
CDKN1B-201ENST00000228872 TMEM14CQ9P0S9 112 aa13.99□□□□□ -0.17
CDKN1B-201ENST00000228872 TMEM213A2RRL7 107 aa13.99□□□□□ -0.17
CDKN1B-201ENST00000228872 PVRIGQ6DKI7 326 aa13.99□□□□□ -0.17
CDKN1B-201ENST00000228872 TMEM75Q8N9X5 138 aa13.99□□□□□ -0.17
CDKN1B-201ENST00000228872 PTPRQQ9UMZ3 2332 aa13.99□□□□□ -0.17
CDKN1B-201ENST00000228872 DIAPH2-AS1Q14236 149 aa13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 FOXI2Q6ZQN5 318 aa13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 SPANXB1Q9NS25 103 aaPredicted RBP13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 HIGD1BQ9P298 99 aa13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 ARFGEF3Q5TH69 2177 aa13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 FBLL1A6NHQ2 334 aaKnown RBP13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 SLC25A17O43808 307 aa13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 TNFRSF1AP19438 455 aa13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 LYZP61626 148 aa13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 PSG8Q9UQ74 426 aa13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 LINC00312Q9Y6C7 94 aa13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 PRB4P10163 310 aaPredicted RBP13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 GATA4P43694 442 aa13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 MRGPRG-AS1Q2M3A8 158 aa13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 WFDC3Q8IUB2 231 aa13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 PIFOQ8TCI5 191 aa13.98□□□□□ -0.17
CDKN1B-201ENST00000228872 PIEZO2Q9H5I5 2752 aa13.97□□□□□ -0.17
CDKN1B-201ENST00000228872 IGKV2D-26A0A0A0MRZ7 120 aa13.97□□□□□ -0.17
CDKN1B-201ENST00000228872 CHAC1Q9BUX1 264 aa13.97□□□□□ -0.17
CDKN1B-201ENST00000228872 SLC25A39Q9BZJ4 359 aaPredicted RBP13.97□□□□□ -0.17
CDKN1B-201ENST00000228872 SLC25A15Q9Y619 301 aa13.97□□□□□ -0.17
CDKN1B-201ENST00000228872 WI2-2373I1.2A0A1W2PRP0 233 aa13.97□□□□□ -0.17
CDKN1B-201ENST00000228872 PRRG2O14669 202 aa13.97□□□□□ -0.17
CDKN1B-201ENST00000228872 WFDC2Q14508 124 aa13.97□□□□□ -0.17
CDKN1B-201ENST00000228872 MRPL51Q4U2R6 128 aaKnown RBP13.97□□□□□ -0.17
CDKN1B-201ENST00000228872 LYZL1Q6UWQ5 148 aa13.97□□□□□ -0.17
CDKN1B-201ENST00000228872 TTTY13Q9BZ97 58 aa13.97□□□□□ -0.17
CDKN1B-201ENST00000228872 ZNF207O43670 478 aaKnown RBP13.96□□□□□ -0.17
CDKN1B-201ENST00000228872 SPATA25Q9BR10 227 aa13.96□□□□□ -0.17
CDKN1B-201ENST00000228872 RAI1Q7Z5J4 1906 aaPredicted RBP13.96□□□□□ -0.17
CDKN1B-201ENST00000228872 CCL3L1P16619 93 aa13.96□□□□□ -0.18
CDKN1B-201ENST00000228872 VMA21Q3ZAQ7 101 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms