RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 ASPHD1Q5U4P2 390 aa16.54■□□□□ 0.24
CCDC130-201ENST00000221554 CIARTQ8N365 385 aaPredicted RBP16.54■□□□□ 0.24
CCDC130-201ENST00000221554 KLHDC1Q8N7A1 406 aa16.54■□□□□ 0.24
CCDC130-201ENST00000221554 SNHG12Q9BXW3 62 aa16.54■□□□□ 0.24
CCDC130-201ENST00000221554 A6NNC1 897 aa16.53■□□□□ 0.24
CCDC130-201ENST00000221554 M0R2Z0 102 aa16.53■□□□□ 0.24
CCDC130-201ENST00000221554 RPL7P18124 248 aaKnown RBP16.53■□□□□ 0.24
CCDC130-201ENST00000221554 RIGQ13278 110 aa16.53■□□□□ 0.24
CCDC130-201ENST00000221554 SSBP4Q9BWG4 385 aaPredicted RBP16.53■□□□□ 0.24
CCDC130-201ENST00000221554 SIRPDQ9H106 197 aa16.53■□□□□ 0.24
CCDC130-201ENST00000221554 C20orf202A1L168 122 aa16.52■□□□□ 0.24
CCDC130-201ENST00000221554 NUTF2P61970 127 aaKnown RBP16.52■□□□□ 0.24
CCDC130-201ENST00000221554 TRAV8-1A0A0A6YYK1 113 aa16.51■□□□□ 0.23
CCDC130-201ENST00000221554 CD24P25063 80 aa16.51■□□□□ 0.23
CCDC130-201ENST00000221554 UBE2E1P51965 193 aa16.51■□□□□ 0.23
CCDC130-201ENST00000221554 TDRG1Q3Y452 100 aa16.51■□□□□ 0.23
CCDC130-201ENST00000221554 FAM19A2Q8N3H0 131 aa16.51■□□□□ 0.23
CCDC130-201ENST00000221554 CT45A10P0DMU9 189 aa16.51■□□□□ 0.23
CCDC130-201ENST00000221554 BTF3P20290 206 aaKnown RBP16.51■□□□□ 0.23
CCDC130-201ENST00000221554 EFNA4P52798 201 aa16.51■□□□□ 0.23
CCDC130-201ENST00000221554 KLK9Q2XQG4 91 aa16.51■□□□□ 0.23
CCDC130-201ENST00000221554 KLF17Q5JT82 389 aaPredicted RBP16.51■□□□□ 0.23
CCDC130-201ENST00000221554 RNASEKQ6P5S7 137 aaKnown RBP16.51■□□□□ 0.23
CCDC130-201ENST00000221554 GATD1Q8NB37 220 aa16.51■□□□□ 0.23
CCDC130-201ENST00000221554 KLK9Q9UKQ9 250 aa16.51■□□□□ 0.23
CCDC130-201ENST00000221554 ANKHD1Q8IWZ3 2542 aaKnown RBP16.5■□□□□ 0.23
CCDC130-201ENST00000221554 A0A1B0GUT8 65 aa16.5■□□□□ 0.23
CCDC130-201ENST00000221554 A0A1W2PRD5 423 aa16.5■□□□□ 0.23
CCDC130-201ENST00000221554 A0A1W2PRF3 423 aa16.5■□□□□ 0.23
CCDC130-201ENST00000221554 A0A1W2PRM7 423 aa16.5■□□□□ 0.23
CCDC130-201ENST00000221554 FAM181BA6NEQ2 426 aa16.5■□□□□ 0.23
CCDC130-201ENST00000221554 EREGO14944 169 aa16.5■□□□□ 0.23
CCDC130-201ENST00000221554 CTRLP40313 264 aa16.5■□□□□ 0.23
CCDC130-201ENST00000221554 RNF114Q9Y508 228 aa16.5■□□□□ 0.23
CCDC130-201ENST00000221554 LOC102724200A0A096LPH7 203 aaPredicted RBP16.49■□□□□ 0.23
CCDC130-201ENST00000221554 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.49■□□□□ 0.23
CCDC130-201ENST00000221554 IGHV2-70DA0A0C4DH43 119 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 SPATA45Q537H7 98 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 ZC2HC1AQ96GY0 325 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 C17orf77Q96MU5 243 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 LPAR2Q9HBW0 351 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 F8W735 103 aaPredicted RBP16.49■□□□□ 0.23
CCDC130-201ENST00000221554 TOX4O94842 621 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 NDUFB8O95169 186 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 OR5AL1P0C617 328 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 ZFP36P26651 326 aaKnown RBP16.49■□□□□ 0.23
CCDC130-201ENST00000221554 RAB9AP51151 201 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 SAPCD1Q5SSQ6 148 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 COX8CQ7Z4L0 72 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 DYNAPQ8N1N2 210 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 UQCR10Q9UDW1 63 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 RABAC1Q9UI14 185 aa16.49■□□□□ 0.23
CCDC130-201ENST00000221554 APOHP02749 345 aaPredicted RBP16.48■□□□□ 0.23
CCDC130-201ENST00000221554 IGHV7-81A0A0B4J1V7 117 aa16.47■□□□□ 0.23
CCDC130-201ENST00000221554 SH2D7A6NKC9 451 aaPredicted RBP16.47■□□□□ 0.23
CCDC130-201ENST00000221554 ZNF843Q8N446 348 aa16.47■□□□□ 0.23
CCDC130-201ENST00000221554 Q8N9W7 124 aa16.47■□□□□ 0.23
CCDC130-201ENST00000221554 FAM110DQ8TAY7 271 aaPredicted RBP16.47■□□□□ 0.23
CCDC130-201ENST00000221554 NDPQ00604 133 aa16.46■□□□□ 0.23
CCDC130-201ENST00000221554 LINC00614P0C842 121 aa16.46■□□□□ 0.22
CCDC130-201ENST00000221554 EGR2P11161 476 aaPredicted RBP16.46■□□□□ 0.22
CCDC130-201ENST00000221554 CTSGP08311 255 aa16.45■□□□□ 0.22
CCDC130-201ENST00000221554 HELZ2Q9BYK8 2649 aaKnown RBP16.44■□□□□ 0.22
CCDC130-201ENST00000221554 TMEM70Q9BUB7 260 aa16.44■□□□□ 0.22
CCDC130-201ENST00000221554 UBTD1Q9HAC8 227 aa16.44■□□□□ 0.22
CCDC130-201ENST00000221554 SPTBN1Q01082 2364 aaKnown RBP16.44■□□□□ 0.22
CCDC130-201ENST00000221554 C2orf70A6NJV1 201 aa16.43■□□□□ 0.22
CCDC130-201ENST00000221554 ZNF785A8K8V0 405 aa16.43■□□□□ 0.22
CCDC130-201ENST00000221554 TCAPO15273 167 aa16.43■□□□□ 0.22
CCDC130-201ENST00000221554 RNF224P0DH78 156 aa16.43■□□□□ 0.22
CCDC130-201ENST00000221554 RPS20P60866 119 aaKnown RBP16.43■□□□□ 0.22
CCDC130-201ENST00000221554 S4R3C0 116 aa16.43■□□□□ 0.22
CCDC130-201ENST00000221554 TRAV9-2A0A087WT02 112 aa16.43■□□□□ 0.22
CCDC130-201ENST00000221554 CRXO43186 299 aaPredicted RBP16.43■□□□□ 0.22
CCDC130-201ENST00000221554 IGLC3P0DOY3 106 aa16.43■□□□□ 0.22
CCDC130-201ENST00000221554 FBLN7Q53RD9 439 aa16.43■□□□□ 0.22
CCDC130-201ENST00000221554 EBLN2Q6P2I7 272 aa16.43■□□□□ 0.22
CCDC130-201ENST00000221554 COL12A1Q99715 3063 aa16.42■□□□□ 0.22
CCDC130-201ENST00000221554 OR2T8A6NH00 312 aa16.42■□□□□ 0.22
CCDC130-201ENST00000221554 RPLP1P05386 114 aaKnown RBP16.42■□□□□ 0.22
CCDC130-201ENST00000221554 URB1-AS1Q96HZ7 61 aa16.42■□□□□ 0.22
CCDC130-201ENST00000221554 ADGRG4Q8IZF6 3080 aa16.42■□□□□ 0.22
CCDC130-201ENST00000221554 BMI1P35226 326 aa16.41■□□□□ 0.22
CCDC130-201ENST00000221554 ZNF493Q6ZR52 646 aa16.41■□□□□ 0.22
CCDC130-201ENST00000221554 UBR5O95071 2799 aaPredicted RBP16.41■□□□□ 0.22
CCDC130-201ENST00000221554 USP9XQ93008 2570 aaPredicted RBP16.41■□□□□ 0.22
CCDC130-201ENST00000221554 TMEM189A5PLL7 270 aa16.41■□□□□ 0.22
CCDC130-201ENST00000221554 M0R3E3 92 aa16.41■□□□□ 0.22
CCDC130-201ENST00000221554 OVOL3O00110 214 aa16.41■□□□□ 0.22
CCDC130-201ENST00000221554 CRIP1P50238 77 aa16.41■□□□□ 0.22
CCDC130-201ENST00000221554 SRSF2Q01130 221 aaKnown RBP16.41■□□□□ 0.22
CCDC130-201ENST00000221554 UNQ5815/PRO19632Q6UWF5 114 aa16.41■□□□□ 0.22
CCDC130-201ENST00000221554 ZNF502Q8TBZ5 544 aa16.41■□□□□ 0.22
CCDC130-201ENST00000221554 TENM4Q6N022 2769 aa16.4■□□□□ 0.22
CCDC130-201ENST00000221554 A0A1W2PPR1 153 aa16.4■□□□□ 0.22
CCDC130-201ENST00000221554 LEPROTL1O95214 131 aa16.4■□□□□ 0.22
CCDC130-201ENST00000221554 GOSR1O95249 250 aa16.4■□□□□ 0.22
CCDC130-201ENST00000221554 LMO4P61968 165 aa16.4■□□□□ 0.22
CCDC130-201ENST00000221554 ATP6V0BQ99437 205 aa16.4■□□□□ 0.22
CCDC130-201ENST00000221554 TMUB1Q9BVT8 246 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms