RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 TMEM242Q9NWH2 141 aa12.86□□□□□ -0.35
PHGDH-216ENST00000641375 NBPF19A0A087WUL8 3843 aa12.86□□□□□ -0.35
PHGDH-216ENST00000641375 GCGP01275 180 aa12.86□□□□□ -0.35
PHGDH-216ENST00000641375 IGHG2P01859 326 aa12.86□□□□□ -0.35
PHGDH-216ENST00000641375 PYYP10082 97 aa12.86□□□□□ -0.35
PHGDH-216ENST00000641375 HIST2H2BCQ6DN03 193 aa12.86□□□□□ -0.35
PHGDH-216ENST00000641375 ZNF491Q8N8L2 437 aa12.86□□□□□ -0.35
PHGDH-216ENST00000641375 CREBBPQ92793 2442 aa12.86□□□□□ -0.35
PHGDH-216ENST00000641375 FXYD5Q96DB9 178 aa12.86□□□□□ -0.35
PHGDH-216ENST00000641375 SLC25A39Q9BZJ4 359 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-216ENST00000641375 FSHBP01225 129 aa12.85□□□□□ -0.35
PHGDH-216ENST00000641375 IL4P05112 153 aa12.85□□□□□ -0.35
PHGDH-216ENST00000641375 RPL23P62829 140 aaKnown RBP12.85□□□□□ -0.35
PHGDH-216ENST00000641375 DEFB112Q30KQ8 113 aa12.85□□□□□ -0.35
PHGDH-216ENST00000641375 C9orf139Q6ZV77 190 aa12.85□□□□□ -0.35
PHGDH-216ENST00000641375 ZANQ9Y493 2812 aa12.85□□□□□ -0.35
PHGDH-216ENST00000641375 WI2-2373I1.2A0A1W2PRP0 233 aa12.84□□□□□ -0.35
PHGDH-216ENST00000641375 COTL1Q14019 142 aa12.84□□□□□ -0.35
PHGDH-216ENST00000641375 C19orf54Q5BKX5 351 aa12.84□□□□□ -0.35
PHGDH-216ENST00000641375 OR2T8A6NH00 312 aa12.84□□□□□ -0.35
PHGDH-216ENST00000641375 GGTLC3B5MD39 225 aa12.84□□□□□ -0.35
PHGDH-216ENST00000641375 GGCTO75223 188 aaKnown RBP12.84□□□□□ -0.35
PHGDH-216ENST00000641375 SUMO1P63165 101 aaKnown RBP12.84□□□□□ -0.35
PHGDH-216ENST00000641375 TMEM183AQ8IXX5 376 aa12.84□□□□□ -0.35
PHGDH-216ENST00000641375 ZNF502Q8TBZ5 544 aa12.84□□□□□ -0.35
PHGDH-216ENST00000641375 FRZBQ92765 325 aa12.84□□□□□ -0.35
PHGDH-216ENST00000641375 DERL1Q9BUN8 251 aa12.84□□□□□ -0.35
PHGDH-216ENST00000641375 CTDSP1Q9GZU7 261 aa12.84□□□□□ -0.35
PHGDH-216ENST00000641375 TGIF2-C20orf24A0A0A6YYL0 155 aa12.83□□□□□ -0.36
PHGDH-216ENST00000641375 MDFIC2A0A1B0GVS7 189 aa12.83□□□□□ -0.36
PHGDH-216ENST00000641375 IGHV3-23P01764 117 aa12.83□□□□□ -0.36
PHGDH-216ENST00000641375 CTSGP08311 255 aa12.83□□□□□ -0.36
PHGDH-216ENST00000641375 ZNF343Q6P1L6 599 aa12.83□□□□□ -0.36
PHGDH-216ENST00000641375 BCL6BQ8N143 479 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-216ENST00000641375 TMEM208Q9BTX3 173 aa12.83□□□□□ -0.36
PHGDH-216ENST00000641375 TMEM14CQ9P0S9 112 aa12.83□□□□□ -0.36
PHGDH-216ENST00000641375 TRBV7-1A0A0A6YYK4 115 aa12.83□□□□□ -0.36
PHGDH-216ENST00000641375 GP9P14770 177 aa12.83□□□□□ -0.36
PHGDH-216ENST00000641375 IER3P46695 156 aa12.83□□□□□ -0.36
PHGDH-216ENST00000641375 EEF1AKMT3Q96AZ1 226 aa12.83□□□□□ -0.36
PHGDH-216ENST00000641375 SHANK2-AS3Q9BTD1 123 aa12.83□□□□□ -0.36
PHGDH-216ENST00000641375 FAM223BA6NKX1 122 aa12.82□□□□□ -0.36
PHGDH-216ENST00000641375 NBEAP1P0C6P0 100 aa12.82□□□□□ -0.36
PHGDH-216ENST00000641375 FAM223AQ8IWN6 122 aa12.82□□□□□ -0.36
PHGDH-216ENST00000641375 ATP6V0BQ99437 205 aa12.82□□□□□ -0.36
PHGDH-216ENST00000641375 RNF24Q9Y225 148 aa12.82□□□□□ -0.36
PHGDH-216ENST00000641375 H3BRN7 92 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 CLDN34H7C241 214 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 BRI3O95415 125 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 CRYBB3P26998 211 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 LEMD1Q68G75 181 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 LINC01551Q86U37 167 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 FAM210BQ96KR6 192 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 C9JCJ5 164 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 H3BUA1 57 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 IGHV4-59P01825 116 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 S100A7P31151 101 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 BLCAPP62952 87 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 BPIFA4PQ86YQ2 179 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 WFDC11Q8NEX6 87 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 MS4A10Q96PG2 267 aa12.81□□□□□ -0.36
PHGDH-216ENST00000641375 HELTA6NFD8 242 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 AMBPP02760 352 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 CLEC3BP05452 202 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 GPR183P32249 361 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 ATP5G2Q06055 141 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 SAPCD1Q5SSQ6 148 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 TEX29Q8N6K0 151 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 BLNKQ8WV28 456 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 ANAPC16Q96DE5 110 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 ELOVL1Q9BW60 279 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 LINC00527Q9UJ94 153 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 LY96Q9Y6Y9 160 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 HIST1H1EP10412 219 aaKnown RBP12.8□□□□□ -0.36
PHGDH-216ENST00000641375 ADMP35318 185 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 ERVFC1-1P60608 527 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 COA6Q5JTJ3 125 aaKnown RBP12.8□□□□□ -0.36
PHGDH-216ENST00000641375 CHRDL1Q9BU40 450 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 ZNF580Q9UK33 172 aa12.8□□□□□ -0.36
PHGDH-216ENST00000641375 TRBV20OR9-2A0A075B6H5 130 aa12.79□□□□□ -0.36
PHGDH-216ENST00000641375 PPIFP30405 207 aaKnown RBP12.79□□□□□ -0.36
PHGDH-216ENST00000641375 RANP62826 216 aaKnown RBP12.79□□□□□ -0.36
PHGDH-216ENST00000641375 Q6YL49 198 aa12.79□□□□□ -0.36
PHGDH-216ENST00000641375 ZNF329Q86UD4 541 aa12.79□□□□□ -0.36
PHGDH-216ENST00000641375 CCDC140Q96MF4 163 aa12.79□□□□□ -0.36
PHGDH-216ENST00000641375 URGCP-MRPS24S4R325 110 aa12.79□□□□□ -0.36
PHGDH-216ENST00000641375 TEX15Q9BXT5 2789 aa12.79□□□□□ -0.36
PHGDH-216ENST00000641375 TRGV3P03979 118 aa12.79□□□□□ -0.36
PHGDH-216ENST00000641375 RPLP1P05386 114 aaKnown RBP12.79□□□□□ -0.36
PHGDH-216ENST00000641375 CD99P14209 185 aa12.79□□□□□ -0.36
PHGDH-216ENST00000641375 MYCNOSP40205 109 aa12.79□□□□□ -0.36
PHGDH-216ENST00000641375 OR4F17Q8NGA8 305 aa12.79□□□□□ -0.36
PHGDH-216ENST00000641375 TMEM190Q8WZ59 177 aa12.79□□□□□ -0.36
PHGDH-216ENST00000641375 BMPR1BO00238 502 aa12.78□□□□□ -0.36
PHGDH-216ENST00000641375 CLEC19AQ6UXS0 136 aa12.78□□□□□ -0.36
PHGDH-216ENST00000641375 FOXC2Q99958 501 aa12.78□□□□□ -0.36
PHGDH-216ENST00000641375 VPREB3Q9UKI3 123 aa12.78□□□□□ -0.36
PHGDH-216ENST00000641375 ITPR3Q14573 2671 aa12.77□□□□□ -0.36
PHGDH-216ENST00000641375 NPSP0C0P6 89 aa12.77□□□□□ -0.36
PHGDH-216ENST00000641375 GNG4P50150 75 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms