RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ITGB1BP1O14713 200 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 EVI2AP22794 236 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 CEACAM8P31997 349 aaPredicted RBP11.67□□□□□ -0.54
SCARB2-216ENST00000639300 DIAPH2-AS1Q14236 149 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 ZNF114Q8NC26 417 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 GATA4P43694 442 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 TMEM155Q4W5P6 130 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 TMEM170BQ5T4T1 132 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 WISP2O76076 250 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 PLA2G2EQ9NZK7 142 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 TRAV9-2A0A087WT02 112 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 A0A1B0GW15 77 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 SRRM4A7MD48 611 aaKnown RBP11.67□□□□□ -0.54
SCARB2-216ENST00000639300 NCR2O95944 276 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 EFNA4P52798 201 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 OR10J3Q5JRS4 329 aa11.67□□□□□ -0.54
SCARB2-216ENST00000639300 A0A1W2PNU3 283 aaPredicted RBP11.66□□□□□ -0.54
SCARB2-216ENST00000639300 IGFL3Q6UXB1 125 aa11.66□□□□□ -0.54
SCARB2-216ENST00000639300 SCGB3A1Q96QR1 104 aa11.66□□□□□ -0.54
SCARB2-216ENST00000639300 SLC50A1Q9BRV3 221 aa11.66□□□□□ -0.54
SCARB2-216ENST00000639300 EML6Q6ZMW3 1958 aa11.66□□□□□ -0.54
SCARB2-216ENST00000639300 CFHR2P36980 270 aa11.66□□□□□ -0.54
SCARB2-216ENST00000639300 FXYD7P58549 80 aa11.66□□□□□ -0.54
SCARB2-216ENST00000639300 LOXP28300 417 aaPredicted RBP11.66□□□□□ -0.54
SCARB2-216ENST00000639300 NDPQ00604 133 aa11.66□□□□□ -0.54
SCARB2-216ENST00000639300 WT1-ASQ06250 92 aa11.66□□□□□ -0.54
SCARB2-216ENST00000639300 DMRTC2Q8IXT2 367 aaPredicted RBP11.66□□□□□ -0.54
SCARB2-216ENST00000639300 RAX2Q96IS3 184 aa11.66□□□□□ -0.54
SCARB2-216ENST00000639300 TPSG1Q9NRR2 321 aa11.66□□□□□ -0.54
SCARB2-216ENST00000639300 IGLV3-9A0A075B6K5 115 aa11.65□□□□□ -0.54
SCARB2-216ENST00000639300 LEPP41159 167 aa11.65□□□□□ -0.54
SCARB2-216ENST00000639300 CACNG7P62955 275 aa11.65□□□□□ -0.54
SCARB2-216ENST00000639300 ZNF664Q8N3J9 261 aa11.65□□□□□ -0.54
SCARB2-216ENST00000639300 PLP1P60201 277 aa11.65□□□□□ -0.54
SCARB2-216ENST00000639300 PAX8Q06710 450 aa11.65□□□□□ -0.54
SCARB2-216ENST00000639300 NDUFA4L2Q9NRX3 87 aa11.65□□□□□ -0.54
SCARB2-216ENST00000639300 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
SCARB2-216ENST00000639300 OR5AN1Q8NGI8 311 aa11.65□□□□□ -0.54
SCARB2-216ENST00000639300 MCRIP2Q9BUT9 160 aaKnown RBP11.65□□□□□ -0.54
SCARB2-216ENST00000639300 BPESC1Q9GZL8 116 aa11.65□□□□□ -0.54
SCARB2-216ENST00000639300 ALPK3Q96L96 1907 aa11.65□□□□□ -0.54
SCARB2-216ENST00000639300 GNLYP22749 145 aa11.65□□□□□ -0.55
SCARB2-216ENST00000639300 SPRNQ5BIV9 151 aa11.65□□□□□ -0.55
SCARB2-216ENST00000639300 PET117Q6UWS5 81 aa11.65□□□□□ -0.55
SCARB2-216ENST00000639300 ATP5LO75964 103 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 C3orf79P0CE67 100 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 ASPHD1Q5U4P2 390 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 LINC00469Q8N7U9 141 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 TLN2Q9Y4G6 2542 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 AMMECR1LQ6DCA0 310 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 RNF5Q99942 180 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 LY96Q9Y6Y9 160 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 TRAV41A0A0B4J266 112 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 TMEM238LA0A1B0GVL6 79 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 A6NJY4 79 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 CRXO43186 299 aaPredicted RBP11.64□□□□□ -0.55
SCARB2-216ENST00000639300 LYZL1Q6UWQ5 148 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 K7ENP7 123 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 PRTN3P24158 256 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 C11orf44Q8N8P7 122 aa11.64□□□□□ -0.55
SCARB2-216ENST00000639300 DENND4AQ7Z401 1863 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 NAV2Q8IVL1 2488 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 IGKV3OR2-268A0A0C4DH90 116 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 GGTLC3B5MD39 225 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 CD7P09564 240 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 COTL1Q14019 142 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 ATP5L2Q7Z4Y8 100 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 DEFB104AQ8WTQ1 72 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 NDUFA3O95167 84 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 RRN3P1Q2M238 152 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 PIP4P1Q86T03 277 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 FNDC10F2Z333 226 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 H3BUX3 64 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 HBDP02042 147 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 Q6ZSR3 168 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 ITLN2Q8WWU7 325 aaPredicted RBP11.63□□□□□ -0.55
SCARB2-216ENST00000639300 JKAMPQ9P055 326 aa11.63□□□□□ -0.55
SCARB2-216ENST00000639300 PSMB11A5LHX3 300 aa11.62□□□□□ -0.55
SCARB2-216ENST00000639300 D6R8Y8 96 aa11.62□□□□□ -0.55
SCARB2-216ENST00000639300 LGALS3P17931 250 aaKnown RBP11.62□□□□□ -0.55
SCARB2-216ENST00000639300 ZNF329Q86UD4 541 aa11.62□□□□□ -0.55
SCARB2-216ENST00000639300 LTBP2Q14767 1821 aa11.62□□□□□ -0.55
SCARB2-216ENST00000639300 ADAMTS9Q9P2N4 1935 aa11.62□□□□□ -0.55
SCARB2-216ENST00000639300 A6NNC1 897 aa11.62□□□□□ -0.55
SCARB2-216ENST00000639300 C1orf194Q5T5A4 169 aa11.62□□□□□ -0.55
SCARB2-216ENST00000639300 Q8TCH9 128 aa11.62□□□□□ -0.55
SCARB2-216ENST00000639300 NPFFR1Q9GZQ6 430 aa11.62□□□□□ -0.55
SCARB2-216ENST00000639300 DKK4Q9UBT3 224 aa11.62□□□□□ -0.55
SCARB2-216ENST00000639300 ZNF106Q9H2Y7 1883 aaKnown RBP11.62□□□□□ -0.55
SCARB2-216ENST00000639300 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.62□□□□□ -0.55
SCARB2-216ENST00000639300 IFI27L1Q96BM0 104 aa11.62□□□□□ -0.55
SCARB2-216ENST00000639300 SETD2Q9BYW2 2564 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-216ENST00000639300 A0A1W2PRX2 142 aa11.61□□□□□ -0.55
SCARB2-216ENST00000639300 NDUFS6O75380 124 aaKnown RBP11.61□□□□□ -0.55
SCARB2-216ENST00000639300 SAA4P35542 130 aa11.61□□□□□ -0.55
SCARB2-216ENST00000639300 MINOS1Q5TGZ0 78 aa11.61□□□□□ -0.55
SCARB2-216ENST00000639300 PEF1Q9UBV8 284 aaKnown RBP11.61□□□□□ -0.55
SCARB2-216ENST00000639300 MINOS1-NBL1R4GNA1 71 aa11.61□□□□□ -0.55
SCARB2-216ENST00000639300 HIVEP3Q5T1R4 2406 aa11.61□□□□□ -0.55
SCARB2-216ENST00000639300 COL4A4P53420 1690 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms