RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NHLRC4P0CG21 123 aaPredicted RBP3.75□□□□□ -1.81
LINC00550-201ENST00000629293 CEACAM3P40198 252 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 BSXQ3C1V8 233 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 GCSAMLQ5JQS6 135 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 PET117Q6UWS5 81 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 VKORC1L1Q8N0U8 176 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 HIST3H2BBQ8N257 126 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 ZNF383Q8NA42 475 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 OR51G1Q8NGK1 321 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 OR4A16Q8NH70 328 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 ZNF596Q8TC21 504 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 FRZBQ92765 325 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 OR51M1Q9H341 326 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 GSN-AS1Q9NRJ2 163 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 IDI2-AS1Q9NZ38 188 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 ZNF729A6NN14 1252 aaPredicted RBP3.74□□□□□ -1.81
LINC00550-201ENST00000629293 FNDC10F2Z333 226 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 SLC25A17O43808 307 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 TRGC1P0CF51 173 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 FAM106CPP0CH98 169 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 TMEM11P17152 192 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 ADIRFQ15847 76 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 SSX9Q7RTT3 188 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 RPUSD4Q96CM3 377 aaKnown RBP3.74□□□□□ -1.81
LINC00550-201ENST00000629293 ADTRPQ96IZ2 230 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 GAL3ST2Q9H3Q3 398 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 SRD5A3Q9H8P0 318 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 LINC01548A6NM66 108 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 C11orf94C9JXX5 98 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 CCL24O00175 119 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 PDE6DO43924 150 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 GGCTO75223 188 aaKnown RBP3.74□□□□□ -1.81
LINC00550-201ENST00000629293 TYMSP04818 313 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 FABP1P07148 127 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 STAG3L2P0CL84 134 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 STAG3L3P0CL85 134 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 NDUFA6P56556 154 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 GNB1P62873 340 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 MEF2CQ06413 473 aaPredicted RBP3.74□□□□□ -1.81
LINC00550-201ENST00000629293 DIAPH2-AS1Q14236 149 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 DNLZQ5SXM8 178 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 OR4A47Q6IF82 309 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 SLC25A48Q6ZT89 311 aaKnown RBP3.74□□□□□ -1.81
LINC00550-201ENST00000629293 MOB3BQ86TA1 216 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 OR10X1Q8NGY0 326 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 RITA1Q96K30 269 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 TMEM68Q96MH6 324 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 RBM14Q96PK6 669 aaKnown RBP3.74□□□□□ -1.81
LINC00550-201ENST00000629293 GPR61Q9BZJ8 451 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 NIT2Q9NQR4 276 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 KCNIP2Q9NS61 270 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 PXMP4Q9Y6I8 212 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 LINC00587B1AMM8 73 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 HRASP01112 189 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 IFNA10P01566 189 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 PRRX1P54821 245 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 HSPE1P61604 102 aaKnown RBP3.74□□□□□ -1.81
LINC00550-201ENST00000629293 SLC35B1P78383 322 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 PYY3Q5JQD4 70 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 COA6Q5JTJ3 125 aaKnown RBP3.74□□□□□ -1.81
LINC00550-201ENST00000629293 TPTE2P1Q5T6R2 138 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 SLC24A4Q8NFF2 622 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 OR10A7Q8NGE5 316 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 OR4X1Q8NH49 305 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 TXNDC17Q9BRA2 123 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 MCRIP2Q9BUT9 160 aaKnown RBP3.74□□□□□ -1.81
LINC00550-201ENST00000629293 ZNF257Q9Y2Q1 563 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 MOB4Q9Y3A3 225 aa3.74□□□□□ -1.81
LINC00550-201ENST00000629293 EPPK1P58107 5090 aaKnown RBP3.74□□□□□ -1.81
LINC00550-201ENST00000629293 F6UZH7 168 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 BUB1B-PAK6H3BSN5 160 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 H7BYZ3 331 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 S100PP25815 95 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 NPY1RP25929 384 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 GALR1P47211 349 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 ATP5G3P48201 142 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 FOXI1Q12951 378 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 HLA-DRB5Q30154 266 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 GFI1BQ5VTD9 330 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 ZNF833PQ6ZTB9 187 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 LINC01551Q86U37 167 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 UPK2O00526 184 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 PPP1R2P9O14990 202 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 CXorf1O96002 111 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 ARL14EPLP0DKL9 152 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 CT45A6P0DMU7 189 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 CT45A5P0DMU8 189 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 CT45A7P0DMV0 189 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 RPL29P47914 159 aaKnown RBP3.73□□□□□ -1.81
LINC00550-201ENST00000629293 PRCDQ00LT1 54 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 EGFEM1PQ0D2K5 195 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 MIC13Q5XKP0 118 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 TMEM144Q7Z5S9 345 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 MUC7Q8TAX7 377 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 C11orf52Q96A22 123 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 RCHY1Q96PM5 261 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 NPVFQ9HCQ7 196 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 TRBV20OR9-2A0A075B6H5 130 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 M0QZK8 103 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 CA2P00918 260 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms