RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 MGAM2Q2M2H8 2515 aa12.53□□□□□ -0.4
CCNA1-203ENST00000625767 MRPS12O15235 138 aaKnown RBP12.52□□□□□ -0.4
CCNA1-203ENST00000625767 CDC34P49427 236 aaPredicted RBP12.52□□□□□ -0.4
CCNA1-203ENST00000625767 SULT1A2P50226 295 aa12.52□□□□□ -0.4
CCNA1-203ENST00000625767 RHOBP62745 196 aa12.52□□□□□ -0.4
CCNA1-203ENST00000625767 OR8I2Q8N0Y5 310 aa12.52□□□□□ -0.4
CCNA1-203ENST00000625767 PCNPQ8WW12 178 aaKnown RBP12.52□□□□□ -0.4
CCNA1-203ENST00000625767 RAB24Q969Q5 203 aa12.52□□□□□ -0.4
CCNA1-203ENST00000625767 A0A1B0GV50 99 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 A0A1W2PPV4 95 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 H3BTX0 84 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 MBP02144 154 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 FGF8P55075 233 aaPredicted RBP12.51□□□□□ -0.41
CCNA1-203ENST00000625767 DEFB114Q30KQ6 69 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 CD300EQ496F6 205 aaPredicted RBP12.51□□□□□ -0.41
CCNA1-203ENST00000625767 FAM90A2PQ658T7 463 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 TCF24Q7RTU0 167 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 ZNF680Q8NEM1 530 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 DYNLRB2Q8TF09 96 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 MARC2Q969Z3 335 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 PHYHIPLQ96FC7 376 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 NBEAL1Q6ZS30 2694 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 LCN15Q6UWW0 184 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 TMEM61Q8N0U2 210 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 NARS2Q96I59 477 aaKnown RBP12.51□□□□□ -0.41
CCNA1-203ENST00000625767 MRPL32Q9BYC8 188 aaKnown RBP12.51□□□□□ -0.41
CCNA1-203ENST00000625767 SIGLEC8Q9NYZ4 499 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 NOTCH1P46531 2555 aa12.51□□□□□ -0.41
CCNA1-203ENST00000625767 A0A1W2PS18 150 aa12.5□□□□□ -0.41
CCNA1-203ENST00000625767 UMAD1C9J7I0 102 aa12.5□□□□□ -0.41
CCNA1-203ENST00000625767 OR10J4P0C629 311 aa12.5□□□□□ -0.41
CCNA1-203ENST00000625767 GP9P14770 177 aa12.5□□□□□ -0.41
CCNA1-203ENST00000625767 OXLD1Q5BKU9 147 aa12.5□□□□□ -0.41
CCNA1-203ENST00000625767 EIF5AL1Q6IS14 154 aaKnown RBP12.5□□□□□ -0.41
CCNA1-203ENST00000625767 SIGLEC15Q6ZMC9 328 aa12.5□□□□□ -0.41
CCNA1-203ENST00000625767 GBGT1Q8N5D6 347 aa12.5□□□□□ -0.41
CCNA1-203ENST00000625767 ACTR3CQ9C0K3 210 aaPredicted RBP12.5□□□□□ -0.41
CCNA1-203ENST00000625767 TECRQ9NZ01 308 aaKnown RBP12.5□□□□□ -0.41
CCNA1-203ENST00000625767 H3BQ15 152 aa12.49□□□□□ -0.41
CCNA1-203ENST00000625767 OR7C2O60412 319 aa12.49□□□□□ -0.41
CCNA1-203ENST00000625767 IGLV1-51P01701 117 aa12.49□□□□□ -0.41
CCNA1-203ENST00000625767 ARL14EPLP0DKL9 152 aa12.49□□□□□ -0.41
CCNA1-203ENST00000625767 RPL11P62913 178 aaKnown RBP12.49□□□□□ -0.41
CCNA1-203ENST00000625767 TMPRSS5Q9H3S3 457 aa12.49□□□□□ -0.41
CCNA1-203ENST00000625767 CTXND1A0A1B0GTU2 59 aa12.48□□□□□ -0.41
CCNA1-203ENST00000625767 STAG3L2P0CL84 134 aa12.48□□□□□ -0.41
CCNA1-203ENST00000625767 STAG3L3P0CL85 134 aa12.48□□□□□ -0.41
CCNA1-203ENST00000625767 PRB4P10163 310 aaPredicted RBP12.48□□□□□ -0.41
CCNA1-203ENST00000625767 TFPI2P48307 235 aa12.48□□□□□ -0.41
CCNA1-203ENST00000625767 C1orf194Q5T5A4 169 aa12.48□□□□□ -0.41
CCNA1-203ENST00000625767 GRAMD2BQ96HH9 432 aa12.48□□□□□ -0.41
CCNA1-203ENST00000625767 ZNF705EA8MWA4 302 aaPredicted RBP12.48□□□□□ -0.41
CCNA1-203ENST00000625767 PRR31Q5SQ13 230 aa12.48□□□□□ -0.41
CCNA1-203ENST00000625767 C9orf66Q5T8R8 295 aa12.48□□□□□ -0.41
CCNA1-203ENST00000625767 BPIFA4PQ86YQ2 179 aa12.48□□□□□ -0.41
CCNA1-203ENST00000625767 TMEM231Q9H6L2 316 aa12.48□□□□□ -0.41
CCNA1-203ENST00000625767 MAP1LC3B2A6NCE7 125 aa12.47□□□□□ -0.41
CCNA1-203ENST00000625767 IGLC2P0DOY2 106 aa12.47□□□□□ -0.41
CCNA1-203ENST00000625767 IGFL4Q6B9Z1 124 aa12.47□□□□□ -0.41
CCNA1-203ENST00000625767 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.47□□□□□ -0.41
CCNA1-203ENST00000625767 WFDC3Q8IUB2 231 aa12.47□□□□□ -0.41
CCNA1-203ENST00000625767 STXBP6Q8NFX7 210 aa12.47□□□□□ -0.41
CCNA1-203ENST00000625767 SFT2D1Q8WV19 159 aa12.47□□□□□ -0.41
CCNA1-203ENST00000625767 FXYD5Q96DB9 178 aa12.47□□□□□ -0.41
CCNA1-203ENST00000625767 PAXXQ9BUH6 204 aa12.47□□□□□ -0.41
CCNA1-203ENST00000625767 MAP1LC3BQ9GZQ8 125 aa12.47□□□□□ -0.41
CCNA1-203ENST00000625767 OR51M1Q9H341 326 aa12.47□□□□□ -0.41
CCNA1-203ENST00000625767 ZNF586Q9NXT0 402 aa12.47□□□□□ -0.41
CCNA1-203ENST00000625767 PFDN2Q9UHV9 154 aa12.47□□□□□ -0.41
CCNA1-203ENST00000625767 G3V4G9 280 aa12.46□□□□□ -0.41
CCNA1-203ENST00000625767 SLC17A3O00476 420 aa12.46□□□□□ -0.41
CCNA1-203ENST00000625767 RPL7P18124 248 aaKnown RBP12.46□□□□□ -0.41
CCNA1-203ENST00000625767 KHDC3LQ587J8 217 aa12.46□□□□□ -0.41
CCNA1-203ENST00000625767 FAM24BQ8N5W8 94 aa12.46□□□□□ -0.41
CCNA1-203ENST00000625767 BLNKQ8WV28 456 aa12.46□□□□□ -0.41
CCNA1-203ENST00000625767 RNF141Q8WVD5 230 aa12.46□□□□□ -0.41
CCNA1-203ENST00000625767 MS4A6AQ9H2W1 248 aa12.46□□□□□ -0.41
CCNA1-203ENST00000625767 ZNF785A8K8V0 405 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 H2AFB1P0C5Y9 115 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 BMI1P35226 326 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 RAB5CP51148 216 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 TAS2R45P59539 299 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 CCL20P78556 96 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 S100A7AQ86SG5 101 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 IQCF2Q8IXL9 164 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 UBQLN2Q9UHD9 624 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 IFNA7P01567 189 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 GCHFRP30047 84 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 GALR1P47211 349 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 UBE2L3P68036 154 aaKnown RBP12.45□□□□□ -0.42
CCNA1-203ENST00000625767 DPPA3Q6W0C5 159 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 RBPMS2Q6ZRY4 209 aaKnown RBP12.45□□□□□ -0.42
CCNA1-203ENST00000625767 DCANP1Q8TF63 244 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 MBD3L1Q8WWY6 194 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 TMEM14CQ9P0S9 112 aa12.45□□□□□ -0.42
CCNA1-203ENST00000625767 HELTA6NFD8 242 aa12.44□□□□□ -0.42
CCNA1-203ENST00000625767 TSPAN4O14817 238 aa12.44□□□□□ -0.42
CCNA1-203ENST00000625767 ATF4P18848 351 aaPredicted RBP12.44□□□□□ -0.42
CCNA1-203ENST00000625767 HLA-DMBP28068 263 aa12.44□□□□□ -0.42
CCNA1-203ENST00000625767 GUCA2BQ16661 112 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms