RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 PRNTQ86SH4 94 aa9.38□□□□□ -0.91
C11orf54-215ENST00000617482 SRSF12Q8WXF0 261 aaKnown RBP9.38□□□□□ -0.91
C11orf54-215ENST00000617482 URB1-AS1Q96HZ7 61 aa9.38□□□□□ -0.91
C11orf54-215ENST00000617482 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.37□□□□□ -0.91
C11orf54-215ENST00000617482 C19orf71A6NCJ1 209 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 LINC00614P0C842 121 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 HNRNPA3P51991 378 aaKnown RBP9.37□□□□□ -0.91
C11orf54-215ENST00000617482 COL5A1-AS1Q5SY13 56 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 GOLT1AQ6ZVE7 132 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 SMIM12Q96EX1 92 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 SLC25A39Q9BZJ4 359 aaPredicted RBP9.37□□□□□ -0.91
C11orf54-215ENST00000617482 GOLT1BQ9Y3E0 138 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 MUC6Q6W4X9 2439 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 PPIAL4CA0A0B4J2A2 164 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 CNIH1O95406 144 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 PPIAL4GP0DN37 164 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 COL8A1P27658 744 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 PLP1P60201 277 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 SPATA12Q7Z6I5 190 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 KLHDC1Q8N7A1 406 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 LINC01560Q8TB33 94 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 C17orf77Q96MU5 243 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 RASL11BQ9BPW5 248 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 CEP295Q9C0D2 2601 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 DCHS2Q6V1P9 2916 aa9.37□□□□□ -0.91
C11orf54-215ENST00000617482 C2orf70A6NJV1 201 aa9.36□□□□□ -0.91
C11orf54-215ENST00000617482 I3L2K1 104 aa9.36□□□□□ -0.91
C11orf54-215ENST00000617482 STPG4Q8N801 248 aa9.36□□□□□ -0.91
C11orf54-215ENST00000617482 OR8B3Q8NGG8 313 aa9.36□□□□□ -0.91
C11orf54-215ENST00000617482 OR8B2Q96RD0 313 aa9.36□□□□□ -0.91
C11orf54-215ENST00000617482 LAMTOR2Q9Y2Q5 125 aa9.36□□□□□ -0.91
C11orf54-215ENST00000617482 CD3EP07766 207 aa9.36□□□□□ -0.91
C11orf54-215ENST00000617482 RBPMS2Q6ZRY4 209 aaKnown RBP9.36□□□□□ -0.91
C11orf54-215ENST00000617482 OTORQ9NRC9 128 aa9.36□□□□□ -0.91
C11orf54-215ENST00000617482 ONECUT1Q9UBC0 465 aa9.36□□□□□ -0.91
C11orf54-215ENST00000617482 IGKV1-17P01599 117 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 LDLRAD2Q5SZI1 272 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 Q86TA4 180 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 ZNF492Q9P255 531 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 S4R3C0 116 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 SVEP1Q4LDE5 3571 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 TMEM238C9JI98 176 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 TIMM23O14925 209 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 LY6HO94772 140 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 IGLV2-11P01706 119 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 IGLL1P15814 213 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 ZNF138P52744 262 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 LINC00173Q6ZV60 143 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 HILPDAQ9Y5L2 63 aa9.35□□□□□ -0.91
C11orf54-215ENST00000617482 TRAV9-2A0A087WT02 112 aa9.34□□□□□ -0.91
C11orf54-215ENST00000617482 CHEK1O14757 476 aa9.34□□□□□ -0.91
C11orf54-215ENST00000617482 TSPOP30536 169 aa9.34□□□□□ -0.91
C11orf54-215ENST00000617482 HINT1P49773 126 aaPredicted RBP9.34□□□□□ -0.91
C11orf54-215ENST00000617482 CT83Q5H943 113 aa9.34□□□□□ -0.91
C11orf54-215ENST00000617482 KLF17Q5JT82 389 aaPredicted RBP9.34□□□□□ -0.91
C11orf54-215ENST00000617482 MUC15Q8N387 334 aa9.34□□□□□ -0.91
C11orf54-215ENST00000617482 ATP6V0BQ99437 205 aa9.34□□□□□ -0.91
C11orf54-215ENST00000617482 GRNP28799 593 aaKnown RBP9.34□□□□□ -0.91
C11orf54-215ENST00000617482 RBX1P62877 108 aa9.34□□□□□ -0.91
C11orf54-215ENST00000617482 RBPJQ06330 500 aa9.34□□□□□ -0.91
C11orf54-215ENST00000617482 TMEM70Q9BUB7 260 aa9.34□□□□□ -0.91
C11orf54-215ENST00000617482 IGHV1-24A0A0C4DH33 117 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 ZNF785A8K8V0 405 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 CDKN1BP46527 198 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 FOXC1Q12948 553 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 GAGE1Q13065 139 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 FAM120AOSQ5T036 256 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 GFRA4Q9GZZ7 299 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 TMEM14CQ9P0S9 112 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 SOX21Q9Y651 276 aaPredicted RBP9.33□□□□□ -0.92
C11orf54-215ENST00000617482 ABCA4P78363 2273 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 A0A1W2PRD5 423 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 A0A1W2PRF3 423 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 A0A1W2PRM7 423 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 NPIPB6E9PJ23 425 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 K7EIM0 57 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 NDUFB8O95169 186 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 ARF6P62330 175 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 SMIM15Q7Z3B0 74 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 BCL6BQ8N143 479 aaPredicted RBP9.33□□□□□ -0.92
C11orf54-215ENST00000617482 ZC2HC1AQ96GY0 325 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 TP73-AS1Q9UF72 201 aa9.33□□□□□ -0.92
C11orf54-215ENST00000617482 TIMM8BQ9Y5J9 83 aaPredicted RBP9.33□□□□□ -0.92
C11orf54-215ENST00000617482 TRBV19A0A075B6N1 114 aa9.32□□□□□ -0.92
C11orf54-215ENST00000617482 LOC102724200A0A096LPH7 203 aaPredicted RBP9.32□□□□□ -0.92
C11orf54-215ENST00000617482 FAM90A27PA6NNH2 459 aa9.32□□□□□ -0.92
C11orf54-215ENST00000617482 LY6LH3BQJ8 138 aa9.32□□□□□ -0.92
C11orf54-215ENST00000617482 CSN3P07498 182 aa9.32□□□□□ -0.92
C11orf54-215ENST00000617482 PAX2Q02962 417 aa9.32□□□□□ -0.92
C11orf54-215ENST00000617482 MCRIP2Q9BUT9 160 aaKnown RBP9.32□□□□□ -0.92
C11orf54-215ENST00000617482 ZFP30Q9Y2G7 519 aa9.32□□□□□ -0.92
C11orf54-215ENST00000617482 ARHGAP32A7KAX9 2087 aa9.32□□□□□ -0.92
C11orf54-215ENST00000617482 SIAH2O43255 324 aa9.32□□□□□ -0.92
C11orf54-215ENST00000617482 LEPROTL1O95214 131 aa9.32□□□□□ -0.92
C11orf54-215ENST00000617482 IL4P05112 153 aa9.32□□□□□ -0.92
C11orf54-215ENST00000617482 FCGR2BP31994 310 aaPredicted RBP9.32□□□□□ -0.92
C11orf54-215ENST00000617482 ZNF672Q499Z4 452 aaPredicted RBP9.32□□□□□ -0.92
C11orf54-215ENST00000617482 DMRTA1Q5VZB9 504 aa9.32□□□□□ -0.92
C11orf54-215ENST00000617482 Q6ZVH6 145 aa9.32□□□□□ -0.92
C11orf54-215ENST00000617482 BPIFA4PQ86YQ2 179 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 427.5 ms