RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 SHPKQ9UHJ6 478 aa16.21■□□□□ 0.19
MMP28-203ENST00000612672 FABP1P07148 127 aa16.2■□□□□ 0.18
MMP28-203ENST00000612672 ZNF182P17025 639 aaPredicted RBP16.2■□□□□ 0.18
MMP28-203ENST00000612672 BTF3P20290 206 aaKnown RBP16.2■□□□□ 0.18
MMP28-203ENST00000612672 GPR141Q7Z602 305 aa16.2■□□□□ 0.18
MMP28-203ENST00000612672 SMIM4Q8WVI0 70 aa16.2■□□□□ 0.18
MMP28-203ENST00000612672 LINC01587Q99440 93 aa16.2■□□□□ 0.18
MMP28-203ENST00000612672 CACFD1Q9UGQ2 172 aa16.2■□□□□ 0.18
MMP28-203ENST00000612672 PITX3O75364 302 aa16.19■□□□□ 0.18
MMP28-203ENST00000612672 ORM2P19652 201 aa16.19■□□□□ 0.18
MMP28-203ENST00000612672 SSBP1Q04837 148 aaKnown RBP16.19■□□□□ 0.18
MMP28-203ENST00000612672 NOP10Q9NPE3 64 aaKnown RBP16.19■□□□□ 0.18
MMP28-203ENST00000612672 SRRM2Q9UQ35 2752 aaKnown RBP16.19■□□□□ 0.18
MMP28-203ENST00000612672 FLG2Q5D862 2391 aaPredicted RBP16.19■□□□□ 0.18
MMP28-203ENST00000612672 TRAV26-1A0A087WT03 109 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 EPM2AB3EWF7 344 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 AKAIN1P0CW23 69 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 HTN1P15515 57 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 HOXA5P20719 270 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 B2MP61769 119 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 FGL1Q08830 312 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 KIR3DS1Q14943 382 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 ESRGQ1W209 222 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 ZNF738Q8NE65 137 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 OR1B1Q8NGR6 318 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 OR1S1Q8NH92 325 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 RNASE8Q8TDE3 154 aaKnown RBP16.18■□□□□ 0.18
MMP28-203ENST00000612672 AP3S1Q92572 193 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 SLC45A2Q9UMX9 530 aa16.18■□□□□ 0.18
MMP28-203ENST00000612672 A0A0J9YY99 117 aa16.17■□□□□ 0.18
MMP28-203ENST00000612672 ATP5IP56385 69 aaPredicted RBP16.17■□□□□ 0.18
MMP28-203ENST00000612672 TAS2R60P59551 318 aa16.17■□□□□ 0.18
MMP28-203ENST00000612672 HIST1H1AQ02539 215 aaPredicted RBP16.17■□□□□ 0.18
MMP28-203ENST00000612672 Q6ZRN7 208 aaPredicted RBP16.17■□□□□ 0.18
MMP28-203ENST00000612672 OR4D5Q8NGN0 318 aa16.17■□□□□ 0.18
MMP28-203ENST00000612672 C16orf74Q96GX8 76 aa16.17■□□□□ 0.18
MMP28-203ENST00000612672 UPK3BQ9BT76 320 aa16.17■□□□□ 0.18
MMP28-203ENST00000612672 PAIP2BQ9ULR5 123 aaKnown RBP16.17■□□□□ 0.18
MMP28-203ENST00000612672 DNAH8Q96JB1 4490 aa16.17■□□□□ 0.18
MMP28-203ENST00000612672 H3BRN7 92 aa16.16■□□□□ 0.18
MMP28-203ENST00000612672 CTDSP2O14595 271 aa16.16■□□□□ 0.18
MMP28-203ENST00000612672 AKR1C4P17516 323 aa16.16■□□□□ 0.18
MMP28-203ENST00000612672 TTC32Q5I0X7 151 aa16.16■□□□□ 0.18
MMP28-203ENST00000612672 CLVS1Q8IUQ0 354 aaPredicted RBP16.16■□□□□ 0.18
MMP28-203ENST00000612672 LINC00612Q8N6U2 182 aa16.16■□□□□ 0.18
MMP28-203ENST00000612672 ZNF586Q9NXT0 402 aa16.16■□□□□ 0.18
MMP28-203ENST00000612672 TIMM8BQ9Y5J9 83 aaPredicted RBP16.16■□□□□ 0.18
MMP28-203ENST00000612672 ZNF701M0R085 212 aaPredicted RBP16.15■□□□□ 0.18
MMP28-203ENST00000612672 INAFM2P0DMQ5 153 aa16.15■□□□□ 0.18
MMP28-203ENST00000612672 XGP55808 180 aa16.15■□□□□ 0.18
MMP28-203ENST00000612672 OR5I1Q13606 314 aa16.15■□□□□ 0.18
MMP28-203ENST00000612672 GGNBP1Q5YKI7 109 aa16.15■□□□□ 0.18
MMP28-203ENST00000612672 OR8A1Q8NGG7 326 aa16.15■□□□□ 0.18
MMP28-203ENST00000612672 RXFP4Q8TDU9 374 aa16.15■□□□□ 0.18
MMP28-203ENST00000612672 C15orf40Q8WUR7 153 aa16.15■□□□□ 0.18
MMP28-203ENST00000612672 GNPNAT1Q96EK6 184 aaPredicted RBP16.15■□□□□ 0.18
MMP28-203ENST00000612672 PRRT1Q99946 306 aa16.15■□□□□ 0.18
MMP28-203ENST00000612672 KCNIP3Q9Y2W7 256 aa16.15■□□□□ 0.18
MMP28-203ENST00000612672 LINC00315P59091 139 aa16.14■□□□□ 0.17
MMP28-203ENST00000612672 TMEM256Q8N2U0 113 aa16.14■□□□□ 0.17
MMP28-203ENST00000612672 PARD6GQ9BYG4 376 aaPredicted RBP16.14■□□□□ 0.17
MMP28-203ENST00000612672 CXCL3P19876 107 aa16.13■□□□□ 0.17
MMP28-203ENST00000612672 RAB11AP62491 216 aa16.13■□□□□ 0.17
MMP28-203ENST00000612672 RHOBP62745 196 aa16.13■□□□□ 0.17
MMP28-203ENST00000612672 MRPS10P82664 201 aaKnown RBP16.13■□□□□ 0.17
MMP28-203ENST00000612672 TMEM144Q7Z5S9 345 aa16.13■□□□□ 0.17
MMP28-203ENST00000612672 BPIFCQ8NFQ6 507 aa16.13■□□□□ 0.17
MMP28-203ENST00000612672 GPR82Q96P67 336 aa16.13■□□□□ 0.17
MMP28-203ENST00000612672 TMEM147Q9BVK8 224 aa16.13■□□□□ 0.17
MMP28-203ENST00000612672 MRPS16Q9Y3D3 137 aaKnown RBP16.13■□□□□ 0.17
MMP28-203ENST00000612672 ANKRD20A5PA0PJZ0 165 aa16.12■□□□□ 0.17
MMP28-203ENST00000612672 CFDP00746 253 aaPredicted RBP16.12■□□□□ 0.17
MMP28-203ENST00000612672 M6PRP20645 277 aa16.12■□□□□ 0.17
MMP28-203ENST00000612672 TMEM263Q8WUH6 116 aaKnown RBP16.12■□□□□ 0.17
MMP28-203ENST00000612672 SHANK2-AS3Q9BTD1 123 aa16.12■□□□□ 0.17
MMP28-203ENST00000612672 A0A1W2PPQ1 181 aa16.11■□□□□ 0.17
MMP28-203ENST00000612672 LYPD1Q8N2G4 141 aa16.11■□□□□ 0.17
MMP28-203ENST00000612672 ZNF503Q96F45 646 aa16.11■□□□□ 0.17
MMP28-203ENST00000612672 RGS5O15539 181 aa16.1■□□□□ 0.17
MMP28-203ENST00000612672 ACOT7LQ6ZUV0 252 aa16.1■□□□□ 0.17
MMP28-203ENST00000612672 GAGE12BA1L429 117 aa16.09■□□□□ 0.17
MMP28-203ENST00000612672 H3BP45 60 aa16.09■□□□□ 0.17
MMP28-203ENST00000612672 CTDSPLO15194 276 aa16.09■□□□□ 0.17
MMP28-203ENST00000612672 GAGE7O76087 117 aa16.09■□□□□ 0.17
MMP28-203ENST00000612672 GAGE12FP0CL80 117 aa16.09■□□□□ 0.17
MMP28-203ENST00000612672 GAGE12GP0CL81 117 aa16.09■□□□□ 0.17
MMP28-203ENST00000612672 GAGE12IP0CL82 117 aa16.09■□□□□ 0.17
MMP28-203ENST00000612672 PSG3Q16557 428 aa16.09■□□□□ 0.17
MMP28-203ENST00000612672 Q5VSD8 79 aa16.09■□□□□ 0.17
MMP28-203ENST00000612672 ZNF493Q6ZR52 646 aa16.09■□□□□ 0.17
MMP28-203ENST00000612672 A0A087X0K7 114 aa16.08■□□□□ 0.16
MMP28-203ENST00000612672 WRBO00258 174 aa16.08■□□□□ 0.16
MMP28-203ENST00000612672 MRPS12O15235 138 aaKnown RBP16.08■□□□□ 0.16
MMP28-203ENST00000612672 SMIM18P0DKX4 95 aa16.08■□□□□ 0.16
MMP28-203ENST00000612672 CDKN1BP46527 198 aa16.08■□□□□ 0.16
MMP28-203ENST00000612672 AKR1C1Q04828 323 aa16.08■□□□□ 0.16
MMP28-203ENST00000612672 IL18Q14116 193 aa16.08■□□□□ 0.16
MMP28-203ENST00000612672 OR10J6PQ8NGY7 276 aa16.08■□□□□ 0.16
MMP28-203ENST00000612672 SRPXP78539 464 aa16.07■□□□□ 0.16
MMP28-203ENST00000612672 SPCS2Q15005 226 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms