RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 FTH1P19P0C7X4 201 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 EVI2AP22794 236 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 ASPHD1Q5U4P2 390 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 DGAT2L7PQ6IED9 249 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 Q6ZR03 302 aa11.88□□□□□ -0.51
VPS36-207ENST00000611132 M0R381 172 aa11.87□□□□□ -0.51
VPS36-207ENST00000611132 GTSCR1Q86UQ5 136 aa11.87□□□□□ -0.51
VPS36-207ENST00000611132 ASCL2Q99929 193 aa11.87□□□□□ -0.51
VPS36-207ENST00000611132 FAM71F2Q6NXP2 309 aa11.87□□□□□ -0.51
VPS36-207ENST00000611132 GAFA1Q96PS6 74 aa11.87□□□□□ -0.51
VPS36-207ENST00000611132 C9orf118A6NHY6 69 aa11.87□□□□□ -0.51
VPS36-207ENST00000611132 ZNF134P52741 427 aa11.87□□□□□ -0.51
VPS36-207ENST00000611132 AMN1Q8IY45 258 aa11.87□□□□□ -0.51
VPS36-207ENST00000611132 SLC25A15Q9Y619 301 aa11.87□□□□□ -0.51
VPS36-207ENST00000611132 LY6G6EA0A0G2JKS1 128 aa11.87□□□□□ -0.51
VPS36-207ENST00000611132 K7EP13 123 aa11.87□□□□□ -0.51
VPS36-207ENST00000611132 KLF5Q13887 457 aaPredicted RBP11.87□□□□□ -0.51
VPS36-207ENST00000611132 NDUFA4L2Q9NRX3 87 aa11.87□□□□□ -0.51
VPS36-207ENST00000611132 U3KQA8 63 aa11.87□□□□□ -0.51
VPS36-207ENST00000611132 PRSS2P07478 247 aa11.86□□□□□ -0.51
VPS36-207ENST00000611132 PPIFP30405 207 aaKnown RBP11.86□□□□□ -0.51
VPS36-207ENST00000611132 ZNF295-AS1Q8N0V1 137 aa11.86□□□□□ -0.51
VPS36-207ENST00000611132 KIR2DL4Q99706 377 aa11.86□□□□□ -0.51
VPS36-207ENST00000611132 PRB3Q04118 309 aaPredicted RBP11.86□□□□□ -0.51
VPS36-207ENST00000611132 TMEM200BQ69YZ2 307 aa11.86□□□□□ -0.51
VPS36-207ENST00000611132 IGLV2-14P01704 120 aa11.86□□□□□ -0.51
VPS36-207ENST00000611132 BSPH1Q075Z2 132 aa11.86□□□□□ -0.51
VPS36-207ENST00000611132 TMEM170BQ5T4T1 132 aa11.86□□□□□ -0.51
VPS36-207ENST00000611132 FAM169BQ8N8A8 192 aa11.86□□□□□ -0.51
VPS36-207ENST00000611132 PRDM6Q9NQX0 595 aa11.86□□□□□ -0.51
VPS36-207ENST00000611132 CDX4O14627 284 aaPredicted RBP11.85□□□□□ -0.51
VPS36-207ENST00000611132 PSG3Q16557 428 aa11.85□□□□□ -0.51
VPS36-207ENST00000611132 SFTA2Q6UW10 78 aa11.85□□□□□ -0.51
VPS36-207ENST00000611132 DEFB125Q8N687 156 aa11.85□□□□□ -0.51
VPS36-207ENST00000611132 SRSF1Q07955 248 aaKnown RBP eCLIP11.85□□□□□ -0.51
VPS36-207ENST00000611132 VCX2Q9H322 139 aa11.85□□□□□ -0.51
VPS36-207ENST00000611132 B9A039 149 aa11.85□□□□□ -0.51
VPS36-207ENST00000611132 NBR2O15453 112 aa11.85□□□□□ -0.51
VPS36-207ENST00000611132 HOXA3O43365 443 aaPredicted RBP11.85□□□□□ -0.51
VPS36-207ENST00000611132 ZNRD1Q9P1U0 126 aa11.85□□□□□ -0.51
VPS36-207ENST00000611132 ADAMTS9Q9P2N4 1935 aa11.85□□□□□ -0.51
VPS36-207ENST00000611132 KIR3DL3Q8N743 410 aa11.85□□□□□ -0.51
VPS36-207ENST00000611132 ARPC1AQ92747 370 aa11.85□□□□□ -0.51
VPS36-207ENST00000611132 VKORC1Q9BQB6 163 aa11.85□□□□□ -0.51
VPS36-207ENST00000611132 PCNX1Q96RV3 2341 aa11.84□□□□□ -0.51
VPS36-207ENST00000611132 IGHV3-49A0A0A0MS15 119 aa11.84□□□□□ -0.51
VPS36-207ENST00000611132 A0A1W2PPI3 338 aa11.84□□□□□ -0.51
VPS36-207ENST00000611132 ZC2HC1BQ5TFG8 222 aa11.84□□□□□ -0.51
VPS36-207ENST00000611132 LYPD1Q8N2G4 141 aa11.84□□□□□ -0.51
VPS36-207ENST00000611132 ZNF256Q9Y2P7 627 aaPredicted RBP11.84□□□□□ -0.51
VPS36-207ENST00000611132 PPP1R17O96001 155 aa11.84□□□□□ -0.51
VPS36-207ENST00000611132 FRMD6-AS1P0C7T7 363 aa11.84□□□□□ -0.51
VPS36-207ENST00000611132 SP9P0CG40 484 aa11.84□□□□□ -0.51
VPS36-207ENST00000611132 TNFRSF14Q92956 283 aa11.84□□□□□ -0.51
VPS36-207ENST00000611132 IGKV2-40A0A087WW87 121 aaPredicted RBP11.84□□□□□ -0.51
VPS36-207ENST00000611132 IGHV3-66A0A0C4DH42 116 aa11.84□□□□□ -0.51
VPS36-207ENST00000611132 IGKV2D-40P01614 121 aaPredicted RBP11.84□□□□□ -0.51
VPS36-207ENST00000611132 KLF17Q5JT82 389 aaPredicted RBP11.84□□□□□ -0.51
VPS36-207ENST00000611132 POU2AF1Q16633 256 aa11.83□□□□□ -0.51
VPS36-207ENST00000611132 CFHR2P36980 270 aa11.83□□□□□ -0.52
VPS36-207ENST00000611132 C17orf58Q2M2W7 97 aa11.83□□□□□ -0.52
VPS36-207ENST00000611132 RNFT1Q5M7Z0 435 aa11.83□□□□□ -0.52
VPS36-207ENST00000611132 NCOR1P1Q9H4R4 102 aa11.83□□□□□ -0.52
VPS36-207ENST00000611132 PCDH15Q96QU1 1955 aa11.83□□□□□ -0.52
VPS36-207ENST00000611132 SH2D1AO60880 128 aa11.83□□□□□ -0.52
VPS36-207ENST00000611132 LOC105371242A0A075B767 164 aa11.83□□□□□ -0.52
VPS36-207ENST00000611132 HAX1O00165 279 aa11.83□□□□□ -0.52
VPS36-207ENST00000611132 SNCGO76070 127 aa11.83□□□□□ -0.52
VPS36-207ENST00000611132 APOBEC3AP31941 199 aaPredicted RBP11.83□□□□□ -0.52
VPS36-207ENST00000611132 ID1P41134 155 aa11.83□□□□□ -0.52
VPS36-207ENST00000611132 ADAMTSL5Q6ZMM2 481 aa11.83□□□□□ -0.52
VPS36-207ENST00000611132 CHAC1Q9BUX1 264 aa11.83□□□□□ -0.52
VPS36-207ENST00000611132 PLA2G5P39877 138 aa11.82□□□□□ -0.52
VPS36-207ENST00000611132 DPF1Q92782 380 aa11.82□□□□□ -0.52
VPS36-207ENST00000611132 FXYD5Q96DB9 178 aa11.82□□□□□ -0.52
VPS36-207ENST00000611132 SMKR1H3BMG3 65 aa11.82□□□□□ -0.52
VPS36-207ENST00000611132 K7EP34 96 aa11.82□□□□□ -0.52
VPS36-207ENST00000611132 KMT2EQ8IZD2 1858 aa11.82□□□□□ -0.52
VPS36-207ENST00000611132 EEF1AKMT3Q96AZ1 226 aa11.82□□□□□ -0.52
VPS36-207ENST00000611132 BEX4Q9NWD9 120 aaPredicted RBP11.82□□□□□ -0.52
VPS36-207ENST00000611132 TMEM131Q92545 1883 aa11.82□□□□□ -0.52
VPS36-207ENST00000611132 IGHV1-8P0DP01 117 aa11.82□□□□□ -0.52
VPS36-207ENST00000611132 ASIPP42127 132 aa11.82□□□□□ -0.52
VPS36-207ENST00000611132 KHDC1LQ5JSQ8 128 aa11.81□□□□□ -0.52
VPS36-207ENST00000611132 SLC50A1Q9BRV3 221 aa11.81□□□□□ -0.52
VPS36-207ENST00000611132 SIGLEC9Q9Y336 463 aa11.81□□□□□ -0.52
VPS36-207ENST00000611132 TGFAP01135 160 aa11.81□□□□□ -0.52
VPS36-207ENST00000611132 WT1-ASQ06250 92 aa11.81□□□□□ -0.52
VPS36-207ENST00000611132 ORMDL2Q53FV1 153 aa11.81□□□□□ -0.52
VPS36-207ENST00000611132 NDUFS8O00217 210 aa11.81□□□□□ -0.52
VPS36-207ENST00000611132 HTN1P15515 57 aa11.81□□□□□ -0.52
VPS36-207ENST00000611132 LGALS9BQ3B8N2 356 aa11.81□□□□□ -0.52
VPS36-207ENST00000611132 LGALS9CQ6DKI2 356 aa11.81□□□□□ -0.52
VPS36-207ENST00000611132 LAGE3Q14657 143 aa11.8□□□□□ -0.52
VPS36-207ENST00000611132 FAM104BQ5XKR9 115 aa11.8□□□□□ -0.52
VPS36-207ENST00000611132 CHTOPQ9Y3Y2 248 aaKnown RBP11.8□□□□□ -0.52
VPS36-207ENST00000611132 NBASA2RRP1 2371 aa11.8□□□□□ -0.52
VPS36-207ENST00000611132 RIF1Q5UIP0 2472 aaKnown RBP11.8□□□□□ -0.52
VPS36-207ENST00000611132 ZNF815PA8K554 130 aa11.8□□□□□ -0.52
VPS36-207ENST00000611132 TIMM23O14925 209 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms