RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 BCAP31P51572 246 aa12.51□□□□□ -0.41
HERC3-214ENST00000601319 S100A10P60903 97 aa12.51□□□□□ -0.41
HERC3-214ENST00000601319 RAB32Q13637 225 aa12.51□□□□□ -0.41
HERC3-214ENST00000601319 VWC2Q2TAL6 325 aa12.51□□□□□ -0.41
HERC3-214ENST00000601319 C17orf77Q96MU5 243 aa12.51□□□□□ -0.41
HERC3-214ENST00000601319 DOK5Q9P104 306 aa12.51□□□□□ -0.41
HERC3-214ENST00000601319 RYR2Q92736 4967 aa12.51□□□□□ -0.41
HERC3-214ENST00000601319 INMT-MINDY4F8WBC2 141 aa12.5□□□□□ -0.41
HERC3-214ENST00000601319 RPL7P18124 248 aaKnown RBP12.5□□□□□ -0.41
HERC3-214ENST00000601319 SULT1A1P50225 295 aa12.5□□□□□ -0.41
HERC3-214ENST00000601319 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.5□□□□□ -0.41
HERC3-214ENST00000601319 Q8NAQ8 132 aa12.5□□□□□ -0.41
HERC3-214ENST00000601319 LINC00052Q96N35 136 aa12.5□□□□□ -0.41
HERC3-214ENST00000601319 MGST2Q99735 147 aa12.5□□□□□ -0.41
HERC3-214ENST00000601319 CXorf65A6NEN9 183 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 FAM24AA6NFZ4 105 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 GOSR2O14653 212 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 CST7O76096 145 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 OR5G3P0C626 314 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 MIFP14174 115 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 GDF5OSQ5U4N7 250 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 STX12Q86Y82 276 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 C16orf92Q96LL3 132 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 UHRF2Q96PU4 802 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 RSG1Q9BU20 258 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 NMES1Q9C002 83 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 ARL6Q9H0F7 186 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 RPRMQ9NS64 109 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 UQCC1Q9NVA1 299 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 WDR83OSQ9Y284 106 aa12.49□□□□□ -0.41
HERC3-214ENST00000601319 A0A087X0K7 114 aa12.48□□□□□ -0.41
HERC3-214ENST00000601319 IGSF23A1L1A6 192 aa12.48□□□□□ -0.41
HERC3-214ENST00000601319 JTBO76095 146 aa12.48□□□□□ -0.41
HERC3-214ENST00000601319 S100A11P31949 105 aa12.48□□□□□ -0.41
HERC3-214ENST00000601319 HBG1P69891 147 aa12.48□□□□□ -0.41
HERC3-214ENST00000601319 HBG2P69892 147 aa12.48□□□□□ -0.41
HERC3-214ENST00000601319 PMS2P11Q13670 270 aa12.48□□□□□ -0.41
HERC3-214ENST00000601319 PATE2Q6UY27 113 aa12.48□□□□□ -0.41
HERC3-214ENST00000601319 TMEM252Q8N6L7 170 aa12.48□□□□□ -0.41
HERC3-214ENST00000601319 MFFQ9GZY8 342 aa12.48□□□□□ -0.41
HERC3-214ENST00000601319 ARV1Q9H2C2 271 aa12.48□□□□□ -0.41
HERC3-214ENST00000601319 X6R8D5 127 aa12.48□□□□□ -0.41
HERC3-214ENST00000601319 A0A0J9YX75 114 aa12.47□□□□□ -0.41
HERC3-214ENST00000601319 A8MTW9 85 aa12.47□□□□□ -0.41
HERC3-214ENST00000601319 CAMLGP49069 296 aa12.47□□□□□ -0.41
HERC3-214ENST00000601319 RAB31Q13636 194 aa12.47□□□□□ -0.41
HERC3-214ENST00000601319 EBLN2Q6P2I7 272 aa12.47□□□□□ -0.41
HERC3-214ENST00000601319 ALMS1Q8TCU4 4167 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 ELOA3CA0A087WX78 387 aaPredicted RBP12.46□□□□□ -0.41
HERC3-214ENST00000601319 IGHV4-28A0A0C4DH34 117 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 DEFB1P60022 68 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 PRR20EP86478 221 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 PRR20CP86479 221 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 PRR20DP86480 221 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 PRR20BP86481 221 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 PRR20AP86496 221 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 CYCSP99999 105 aaKnown RBP12.46□□□□□ -0.41
HERC3-214ENST00000601319 CEMP1Q6PRD7 247 aaPredicted RBP12.46□□□□□ -0.41
HERC3-214ENST00000601319 ZNF709Q8N972 641 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 C11orf45Q8TAV5 145 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 CHAC2Q8WUX2 184 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 C20orf173Q96LM9 149 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 HRH4Q9H3N8 390 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 CLEC5AQ9NY25 188 aa12.46□□□□□ -0.41
HERC3-214ENST00000601319 TRAV8-2A0A0B4J237 113 aa12.45□□□□□ -0.42
HERC3-214ENST00000601319 UBE2L5PA0A1B0GUS4 154 aa12.45□□□□□ -0.42
HERC3-214ENST00000601319 MRPS12O15235 138 aaKnown RBP12.45□□□□□ -0.42
HERC3-214ENST00000601319 COX7A2P2O60397 106 aa12.45□□□□□ -0.42
HERC3-214ENST00000601319 ATP6V1FQ16864 119 aa12.45□□□□□ -0.42
HERC3-214ENST00000601319 ZNF705AQ6ZN79 300 aaPredicted RBP12.45□□□□□ -0.42
HERC3-214ENST00000601319 LINC00305Q7Z4B0 112 aa12.45□□□□□ -0.42
HERC3-214ENST00000601319 XCL2Q9UBD3 114 aa12.45□□□□□ -0.42
HERC3-214ENST00000601319 DNAH1Q9P2D7 4330 aa12.44□□□□□ -0.42
HERC3-214ENST00000601319 E5RGE8 158 aa12.44□□□□□ -0.42
HERC3-214ENST00000601319 MPDU1O75352 247 aa12.44□□□□□ -0.42
HERC3-214ENST00000601319 SIX6O95475 246 aa12.44□□□□□ -0.42
HERC3-214ENST00000601319 RBMY1A1P0DJD3 496 aaKnown RBP12.44□□□□□ -0.42
HERC3-214ENST00000601319 RBMY1CP0DJD4 496 aa12.44□□□□□ -0.42
HERC3-214ENST00000601319 CXCL2P19875 107 aa12.44□□□□□ -0.42
HERC3-214ENST00000601319 H2BFSP57053 126 aa12.44□□□□□ -0.42
HERC3-214ENST00000601319 RBMY1FQ15415 496 aaKnown RBP12.44□□□□□ -0.42
HERC3-214ENST00000601319 FAM78BQ5VT40 261 aa12.44□□□□□ -0.42
HERC3-214ENST00000601319 TMEM37Q8WXS4 190 aa12.44□□□□□ -0.42
HERC3-214ENST00000601319 KLK5Q9Y337 293 aaPredicted RBP12.44□□□□□ -0.42
HERC3-214ENST00000601319 ZNF705FA8MVS1 300 aaPredicted RBP12.43□□□□□ -0.42
HERC3-214ENST00000601319 F6UB75 175 aa12.43□□□□□ -0.42
HERC3-214ENST00000601319 DEFB4AO15263 64 aa12.43□□□□□ -0.42
HERC3-214ENST00000601319 RLN2P04090 185 aa12.43□□□□□ -0.42
HERC3-214ENST00000601319 ZNF705DP0CH99 300 aaPredicted RBP12.43□□□□□ -0.42
HERC3-214ENST00000601319 ZNF705BP0CI00 300 aaPredicted RBP12.43□□□□□ -0.42
HERC3-214ENST00000601319 RPL29P47914 159 aaKnown RBP12.43□□□□□ -0.42
HERC3-214ENST00000601319 PSG9Q00887 426 aa12.43□□□□□ -0.42
HERC3-214ENST00000601319 OPCMLQ14982 345 aa12.43□□□□□ -0.42
HERC3-214ENST00000601319 C10orf113Q5VZT2 155 aa12.43□□□□□ -0.42
HERC3-214ENST00000601319 Q6ZRG5 221 aa12.43□□□□□ -0.42
HERC3-214ENST00000601319 OR4B1Q8NGF8 309 aa12.43□□□□□ -0.42
HERC3-214ENST00000601319 PHLDA1Q8WV24 401 aaPredicted RBP12.43□□□□□ -0.42
HERC3-214ENST00000601319 PFDN5Q99471 154 aa12.43□□□□□ -0.42
HERC3-214ENST00000601319 NEU1Q99519 415 aa12.43□□□□□ -0.42
HERC3-214ENST00000601319 SLC25A31Q9H0C2 315 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 407.7 ms