RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 CA1P00915 261 aaPredicted RBP11.96□□□□□ -0.49
SHKBP1-215ENST00000597649 IFNA5P01569 189 aa11.96□□□□□ -0.49
SHKBP1-215ENST00000597649 AP2S1P53680 142 aaPredicted RBP11.96□□□□□ -0.49
SHKBP1-215ENST00000597649 ZNF90Q03938 601 aa11.96□□□□□ -0.49
SHKBP1-215ENST00000597649 OR2F1Q13607 317 aa11.96□□□□□ -0.49
SHKBP1-215ENST00000597649 AQP10Q96PS8 301 aa11.96□□□□□ -0.49
SHKBP1-215ENST00000597649 TNFSF18Q9UNG2 199 aa11.96□□□□□ -0.49
SHKBP1-215ENST00000597649 IGKV1D-37A0A075B6S9 117 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 IGKV1OR2-108A0A075B7D4 117 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 IGHV3OR16-13A0A075B7E8 117 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 IGHV3-74A0A0B4J1X5 117 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 G3V3Q6 166 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 IL4P05112 153 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 RBMY1A1P0DJD3 496 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 RBMY1CP0DJD4 496 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 PSG1P11464 419 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 FGF7P21781 194 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 CMC4P56277 68 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 RBMY1FQ15415 496 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 VWC2Q2TAL6 325 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 CYP2G1PQ6ZSU1 146 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 TCTE3Q8IZS6 198 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 Q8NAQ8 132 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 BPIFCQ8NFQ6 507 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 OR51G1Q8NGK1 321 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 SCGB1C1Q8TD33 95 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 ATP5SQ99766 215 aa11.95□□□□□ -0.5
SHKBP1-215ENST00000597649 CFDP00746 253 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-215ENST00000597649 GIG44P09565 113 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-215ENST00000597649 SELENOTP62341 195 aa11.94□□□□□ -0.5
SHKBP1-215ENST00000597649 LINC00336Q6ZUF6 198 aa11.94□□□□□ -0.5
SHKBP1-215ENST00000597649 NARS2Q96I59 477 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-215ENST00000597649 PBDC1Q9BVG4 233 aa11.94□□□□□ -0.5
SHKBP1-215ENST00000597649 WDR83OSQ9Y284 106 aa11.94□□□□□ -0.5
SHKBP1-215ENST00000597649 AGPAT2O15120 278 aa11.93□□□□□ -0.5
SHKBP1-215ENST00000597649 MPDU1O75352 247 aa11.93□□□□□ -0.5
SHKBP1-215ENST00000597649 MED14OSP0DP75 135 aa11.93□□□□□ -0.5
SHKBP1-215ENST00000597649 NPPCP23582 126 aa11.93□□□□□ -0.5
SHKBP1-215ENST00000597649 CAMLGP49069 296 aa11.93□□□□□ -0.5
SHKBP1-215ENST00000597649 LYZP61626 148 aa11.93□□□□□ -0.5
SHKBP1-215ENST00000597649 LEMD1Q68G75 181 aa11.93□□□□□ -0.5
SHKBP1-215ENST00000597649 FAM24BQ8N5W8 94 aa11.93□□□□□ -0.5
SHKBP1-215ENST00000597649 ZNF709Q8N972 641 aa11.93□□□□□ -0.5
SHKBP1-215ENST00000597649 METTL26Q96S19 204 aa11.93□□□□□ -0.5
SHKBP1-215ENST00000597649 HRH4Q9H3N8 390 aa11.93□□□□□ -0.5
SHKBP1-215ENST00000597649 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
SHKBP1-215ENST00000597649 PFDN2Q9UHV9 154 aa11.93□□□□□ -0.5
SHKBP1-215ENST00000597649 RNF222A6NCQ9 220 aa11.92□□□□□ -0.5
SHKBP1-215ENST00000597649 HMSDA8MTL9 139 aa11.92□□□□□ -0.5
SHKBP1-215ENST00000597649 C11orf94C9JXX5 98 aa11.92□□□□□ -0.5
SHKBP1-215ENST00000597649 APOHP02749 345 aaPredicted RBP11.92□□□□□ -0.5
SHKBP1-215ENST00000597649 GATA2P23769 480 aaPredicted RBP11.92□□□□□ -0.5
SHKBP1-215ENST00000597649 RNF125Q96EQ8 232 aa11.92□□□□□ -0.5
SHKBP1-215ENST00000597649 MGST2Q99735 147 aa11.92□□□□□ -0.5
SHKBP1-215ENST00000597649 RABAC1Q9UI14 185 aa11.92□□□□□ -0.5
SHKBP1-215ENST00000597649 AGRNO00468 2067 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 IGHV4-28A0A0C4DH34 117 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 C17orf112F2Z3M2 114 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 ORM2P19652 201 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 HLA-DMBP28068 263 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 S100A7P31151 101 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 DEFB131AP59861 70 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 ZNF266Q14584 549 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 Q6ZTC4 211 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 TCF24Q7RTU0 167 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 OR11H4Q8NGC9 324 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 PPP1R14BQ96C90 147 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 KRTAP4-5Q9BYR2 181 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 WDR61Q9GZS3 305 aaKnown RBP11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 MS4A6AQ9H2W1 248 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 WFDC1Q9HC57 220 aa11.91□□□□□ -0.5
SHKBP1-215ENST00000597649 IGHV4-4A0A075B6R2 117 aa11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 BORCS7-ASMTA0A0B4J1R7 106 aa11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 A0A1W2PS18 150 aa11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 RTL8CO15255 209 aa11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 C1QBP02746 253 aa11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 HNRNPCP07910 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 LINC00869P0C866 280 aa11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 USF2Q15853 346 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 TMEM182Q6ZP80 229 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 Q6ZRG5 221 aa11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 OR1B1Q8NGR6 318 aa11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 ST8SIA2Q92186 375 aa11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 GRAMD2BQ96HH9 432 aa11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 TMEM231Q9H6L2 316 aa11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 KCNIP2Q9NS61 270 aa11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 SLC45A2Q9UMX9 530 aa11.9□□□□□ -0.5
SHKBP1-215ENST00000597649 LRP1BQ9NZR2 4599 aa11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 ELOA3CA0A087WX78 387 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 A0A0D9SG52 128 aa11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 TAAR5O14804 337 aa11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 HYPMO75409 117 aa11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 OR5G3P0C626 314 aa11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 EIF2B2P49770 351 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 PAFAH1B2P68402 229 aa11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 MIC13Q5XKP0 118 aa11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 S100A7AQ86SG5 101 aa11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 HYLS1Q96M11 299 aa11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 NPCDR1Q9BY65 106 aa11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 ARL6Q9H0F7 186 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms